BGIOSGA022278

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Revision as of 13:15, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022278| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022278, complete gene.| tag = P0535G0...")
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Gene Name

BGIOSGA022278

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022278, complete gene.

LocusTag

P0535G04.36

Ensembl Transcript ID

BGIOSGA022278-TA

Ensembl Protein ID

BGIOSGA022278-PA

Length

2987

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2437122..2440108

Sequence Coding Region

2437122..2437634,2437735..2437868,2439101..2439214,2439319..2439505,2439599..2439667
,2439842..2440108

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2437122..2440108 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2437122..2440108 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGTTCTCTTGCGGCGTCTGCATTCTTCCCTGTCCCTGGGTCTTCCCCTGCAGCTTCGGCTAGAAGCTCTAAGAACACAACCGGTGAATTGCCAGAGAATTTGAGTGTCCGCGGAATCGTCGCGAAGCCTAATCCGTCTCCAGGGGCCATGCAAGTCAAGGCGCAGGCGCAAGCCCTTCCTAAGGTTAATGGAACCAAGGTTAACCTGAAGACTACAAGCCCAGACAAGGAGGATATAATACCGTACACTGCTCCGAAGACGTTCTATAACCAATTGCCAGACTGGAGCATGCTTCTTGCAGCTGTCACGACCATTTTCCTGGCAGCTGAGAAGCAGTGGACTCTGCTTGACTGGAAGCCGAAGAAGCCTGATATGCTGGCTGACACATTCGGCTTTGGTAGGATCATCCAAGACGGGCTGGTGTTTAGGCAAAACTTCTTGATTCGGTCCTACGAGATTGGTGCTGATCGTACAGCTTCTATTGAGACATTAATGAATCATTTACAGGAAACAGCTCTGAACCATGTGAAAACTGCTGGTCTCTTAGGTGATGGTTTTGGTGCTACGCCGGAGATGAGCAAACGGAACTTAATATGGGTTGTCAGCAAAATTCAGCTTCTTGTTGAGCGATACCCATCATGGGGAGATATGGTCCAAGTTGACACATGGGTAGCTGCTGCTGGCAAAAATGGCATGCGTCGAGATTGGCATGTTCGGGACTACAACTCTGGTCAAACAATCTTGAGGGCTACAAGTGTTTGGGTGATGATGAATAAGAACACTAGAAGACTTTCAAAAATGCCAGATGAAGTTAGAGCTGAAATAGGCCCGTATTTCAATGGCCGTTCTGCTATATCAGAGGAGCAGGGTGAAAAGTTGCCTAAGCCAGGGACCACATTTGATGGCGCTGCTACCAAACAATTCACAAGAAAAGGGCTTACTCCGAAGTGGAGTGACCTTGATGTCAACCAGCATGTGAACAATGTGAAGTATATTGGTTGGATACTTGAGAGTGCTCCAATTTCAATACTGGAGAAGCATGAGCTTGCAAGCATGACCTTGGATTACAGGAAGGAGTGTGGCCGTGACAGTGTGCTTCAGTCGCTTACCACTGTTTCAGGTGAATGCGATGATGGCAACACAGAATCCTCCATCCAGTGTGACCATCTGCTTCAGCTGGAGTCCGGAGCAGACATTGTGAAGGCTCACACAGAGTGGCGACCGAAGCGAGCTCAGGGCGAGGGGAACATGGGTTTTTTCCCAGCTGAGAGTGCATGA</cdnaseq>

Protein Sequence

<aaseq>MAGSLAASAFFPVPGSSPAASARSSKNTTGELPENLSVRGIVAKPNPSPGAMQVKAQAQALPKVNGTKVNLKTTSPDKEDIIPYTAPKTFYNQLPDWSMLLAAVTTIFLAAEKQWTLLDWKPKKPDMLADTFGFGRIIQDGLVFRQNFLIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGFGATPEMSKRNLIWVVSKIQLLVERYPSWGDMVQVDTWVAAAGKNGMRRDWHVRDYNSGQTILRATSVWVMMNKNTRRLSKMPDEVRAEIGPYFNGRSAISEEQGEKLPKPGTTFDGAATKQFTRKGLTPKWSDLDVNQHVNNVKYIGWILESAPISILEKHELASMTLDYRKECGRDSVLQSLTTVSGECDDGNTESSIQCDHLLQLESGADIVKAHTEWRPKRAQGEGNMGFFPAESA</aaseq>

Gene Sequence

<dnaseqindica>1..513#614..747#1980..2093#2198..2384#2478..2546#2721..2987#ATGGCTGGTTCTCTTGCGGCGTCTGCATTCTTCCCTGTCCCTGGGTCTTCCCCTGCAGCTTCGGCTAGAAGCTCTAAGAACACAACCGGTGAATTGCCAGAGAATTTGAGTGTCCGCGGAATCGTCGCGAAGCCTAATCCGTCTCCAGGGGCCATGCAAGTCAAGGCGCAGGCGCAAGCCCTTCCTAAGGTTAATGGAACCAAGGTTAACCTGAAGACTACAAGCCCAGACAAGGAGGATATAATACCGTACACTGCTCCGAAGACGTTCTATAACCAATTGCCAGACTGGAGCATGCTTCTTGCAGCTGTCACGACCATTTTCCTGGCAGCTGAGAAGCAGTGGACTCTGCTTGACTGGAAGCCGAAGAAGCCTGATATGCTGGCTGACACATTCGGCTTTGGTAGGATCATCCAAGACGGGCTGGTGTTTAGGCAAAACTTCTTGATTCGGTCCTACGAGATTGGTGCTGATCGTACAGCTTCTATTGAGACATTAATGAATCATTTACAGGTGATACAATGGAGCTATGCTGCTTTAGATTTTCTTCTGTATTTTTCACTATTGGTACATTATGTTCGTGGCATACTAACTGTAATTTGAAGCTTTGCAGGAAACAGCTCTGAACCATGTGAAAACTGCTGGTCTCTTAGGTGATGGTTTTGGTGCTACGCCGGAGATGAGCAAACGGAACTTAATATGGGTTGTCAGCAAAATTCAGCTTCTTGTTGAGCGATACCCATCATGGTACTTTTTCTGCAATCCACTACTCTCCACATCATTTTCTTGGATGGCAAAACTTCTCTTTTTACTCTTAATTCATAACATTTCTTTCATTCTTAATGGAGTACTTTTGTCCCCGGTGCATTTAGTGTCACAATTTAATGTTTACATGGTACGGGAAAGATTTATCACTCAATATCCACGGTGTAATGTTTTTAGCTAAACTCAATATCCACGGTGTAATGTTTTTAGCTAAACTTGTCTTCAGTCCTTTTTTCCTTTTTTCCTATGTTTGTGTGCTGTGGCATCCGATGGATCATCGAGATTCTGAGTAGACATAGATTCTTGCATTCCTTATGCGACATGAGGCACATGTTCGAGTGTTTATCACCCTACATGAAAACCTTTCCCTACTAAGTTGCTGCTTCTATTGTTCTGCAGATATAAGCAATATTTTTGCCTATTTTTCCTGTGCTTTGAATTTCTCATAGGTTCATGGCCCACAACCTTTAGCAGGCATAGTGCCTTGAAATGGAGTATTACACTCAAAAGCATAACAATAACATGTATTGCCTTGTATGATAAGATGAGTGATAGATCTTTTGAAATCATTTACTGAGGAAAACGTTCGTTTATTTGACAAGACAATGTATTGATGACCTAGAACTGCTCTATTAAGTGGTATCTGCCCTGTGTCTCCTTTCGTACAAATTGTTGCACCCCTGTTCATGTTACTTCTCACTTTTCACCATGGCAGGCATGTTTAGAAAATCATTTGATTTTACAGGGCATTACCATGTGACCCCTTAATAACTAACAAATATATTTTGGGTCCACCAAATCTGTGGTGGATGGAAAGGGAAATTAATAAACACAAATGGAAAATTCTTCATTGTGAAACGTGATAAGGACAAATTTTGTGAATAAATAAAGTAACAAAAAATGGCTACCTACATATAGAGTACACCTCAAGAGATCAGAAAAGTTGCCTTTATTGATGGAGTAATTGAATTAGTAGTAAGCAATAAATTCTGTGGACCTAGGGGACATCCCTGATCTAGATCGAGTTTTGATCTCATGCTACATTTAATCTTCCATGTCAGCAACTTTCAGTACCTGCTATTAAATTTCCCCTGTTCTTCTGACGATTGATGCAATTTTAAGTTTATGAGAAGGAAAACGGTCTGCTGTTTTTGAATTCTGAGTGTAGTTTACACAATTTCTCATAGGCTGAAATTTTGGTTGCAAATTTTTAGGGGAGATATGGTCCAAGTTGACACATGGGTAGCTGCTGCTGGCAAAAATGGCATGCGTCGAGATTGGCATGTTCGGGACTACAACTCTGGTCAAACAATCTTGAGGGCTACAAGGTTTGTGTTTATCGTTTGCATTTGTTGCATTTCTTTTGTTTCATGCTGTTTACCAGCATGTTTTATTCCTTTTCGATTGCTAATTGTTCCTCTCTTGTTTGCAGTGTTTGGGTGATGATGAATAAGAACACTAGAAGACTTTCAAAAATGCCAGATGAAGTTAGAGCTGAAATAGGCCCGTATTTCAATGGCCGTTCTGCTATATCAGAGGAGCAGGGTGAAAAGTTGCCTAAGCCAGGGACCACATTTGATGGCGCTGCTACCAAACAATTCACAAGAAAAGGGCTTACTGTAAGTCAGTTAATATTGCTTGTTACCGTCATTCATTTTGCTGGTGGTTCTCATGCATAAAATTTCTCATGAGGGATCCTTTGTTCATGTCAGCCGAAGTGGAGTGACCTTGATGTCAACCAGCATGTGAACAATGTGAAGTATATTGGTTGGATACTTGAGGTAACTTCTTTTTCCTTTTCTCTATCCTAACATGCTATCTCTAGATCAGAAAAGAGAGTGTCTGATCGTAATTAGTAACCTAGTTCCTAGTCATATGCCAAGCTGTAAAAACACTTGCACTGTATATTCAAAAGCTATTCAAATTTCTGAGTACGTTTTGTTTTTTTTCCTCAGAGTGCTCCAATTTCAATACTGGAGAAGCATGAGCTTGCAAGCATGACCTTGGATTACAGGAAGGAGTGTGGCCGTGACAGTGTGCTTCAGTCGCTTACCACTGTTTCAGGTGAATGCGATGATGGCAACACAGAATCCTCCATCCAGTGTGACCATCTGCTTCAGCTGGAGTCCGGAGCAGACATTGTGAAGGCTCACACAGAGTGGCGACCGAAGCGAGCTCAGGGCGAGGGGAACATGGGTTTTTTCCCAGCTGAGAGTGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022278