BGIOSGA022282

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Revision as of 13:15, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022282| Description = BGIOSGA022282| Definition = Oryza sativa Indica Group BGIOSGA022282, complete gene.| tag = | tid = BGIOSGA022282-TA|...")
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Gene Name

BGIOSGA022282

Description

BGIOSGA022282

Definition

Oryza sativa Indica Group BGIOSGA022282, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA022282-TA

Ensembl Protein ID

BGIOSGA022282-PA

Length

4840

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2544738..2549577

Sequence Coding Region

2544738..2545031,2545439..2546189,2546354..2546510,2546605..2546659,2546980..2547047
,2547122..2547222,2547297..2547327,2547482..2547595,2548307..2548447
,2548647..2548706,2549403..2549577

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2544738..2549577 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2544738..2549577 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGCGCCGCCGCGCTCCGGCGATCCGCGCGCCGTGTCGTCCGGCCAGGCGCCTACGCCTTGTCCCGGGCGCTACAGCACCCTGAGCGCCTCCTCTCCTCCCAGGCTTCGCCGGACCGCGGCGGGGTGCTGGGTTCGGAGCTTGGGCGGTATCCCCCGGAGAGGGTCAGGAACTTCTCCATCATCGCGCACGTCGACCACGGCAAGTCCACGCTCGCCGACCGGTTGCTGGAGCTCACCGGCACCATCAAGAAGGGCCATGGCCAACCTCAGTACCTCGACAAGTTACAGGTAGAGAGAGAGAGGGGAATCACAGTCAAAGCACAAACAGCAACTATGTTCTACAGACATGCTAACAACCAACTTCCTGCATCTGATCAGCCAGATGCTCCAAGCTATTTGCTTAACTTGATTGATACTCCTGGGCATGTGGATTTCAGCTACGAAGTATCCAGGTCGCTTGCAGCTTGTCAGGGTGCTCTTTTAGTAGTTGATGCAGCCCAAGGTGTCCAAGCACAAACAATTGCAAACTTCTACCTTGCATTTGAGTCGAATCTAAGCATCATTCCTGTTATTAATAAGATTGATCAGCCTACCGCTGATCCAGATAATGTAAAGGCTCAACTGAAGAGGTTATTTGACATTGATCCAAGTGAAGCTCTGCTAACTTCAGCTAAAACTGGTCAGGGCCTTAGCCAGGTCTTGCCTGCTGTTATTGAGCGGATTCCTTCCCCACCTGGAAAATGTGATTCACCTGTACGCATGCTCCTCTTAGATTCATACTATGATGAGTATAAAGGGGTGATATGCCATGTTGCTGTTGTGGATGGTGCTCTCCACAAAGGAGATAAGATTGCATCTGCCGCAACTGGTCGCACATATGAAGTCCTTGATGTGGGCATTATGCATCCAGAGCTTACTCCTACCGGTGTGCTTTACACTGGACAAGTTGGATATGTCATAAGCGGAATGCGTTCAACTAAAGAAGCACGAATTGGTGATACTCTTCATCAAGCAAAGAGTATTGTCGAACCACTTCCTGGTTTCAAGCCTGCTAGACACATGGTCTTCTCTGGTCTATACCCAGCTGATGGCTCTGACTTTGACGCTCTTAGCCATGCAATTGAAAAACTAACATGTAACGATGCGAGTGTGTCTGTTACAAAAGAGACAAGCACTGCACTTGGCATGGGCTTCAGATGTGGCTTTCTAGGATTACTACACATGGATGTATTTCATCAGCGGCTAGAACAAGAACATGGAGCTCAAGTCATATCGACAATACCGACAGTGCCATATATCTTTGAGTATGGTGATGGAAGCAAAGTGCAAGTCGAGAACCCTGCAGCTTTGGCTTCAAATCCTGGAAAGCGTATAGCAGCTTGTTGGGAACCAACAGTCATTGCAACAATTATTATTCCTAAAGTCTTGAGACTACCCAACCGCTTTTTCAGCCAAAGGGCTTTGTTGAAGTACCGATTACCATTGAGGGAAATCATTGTGGATTTCTACAATGAACTGAAAAGCATAACATCTGGATATGCTACTTTTGATTATGAAGATTCTGAGTACCAACAGTCTGATCTTGTTAAGATGGATATTTTACTTAATGGTCAGCCTGTTGATGCTATGGCAACAATAGTCCACAACCAGAAAGCTCAGAGAGTTGGACGAGAATTAGTGGATAAACTCAAGAAATTCATAGAACGGCAAATGTTTGAGATCACTATACAAGCCGCAGTTGGTTCAAAGGTTATCGCAAGGGAAACTCTGTCAGCAATGAGAAAGAACGTTCTGGCCAAGTGCTATGGTGGTGATATTACTCGCAAAAAGAAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGATATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAG</cdnaseq>

Protein Sequence

<aaseq>MAGAAALRRSARRVVRPGAYALSRALQHPERLLSSQASPDRGGVLGSELGRYPPERVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTIANFYLAFESNLSIIPVINKIDQPTADPDNVKAQLKRLFDIDPSEALLTSAKTGQGLSQVLPAVIERIPSPPGKCDSPVRMLLLDSYYDEYKGVICHVAVVDGALHKGDKIASAATGRTYEVLDVGIMHPELTPTGVLYTGQVGYVISGMRSTKEARIGDTLHQAKSIVEPLPGFKPARHMVFSGLYPADGSDFDALSHAIEKLTCNDASVSVTKETSTALGMGFRCGFLGLLHMDVFHQRLEQEHGAQVISTIPTVPYIFEYGDGSKVQVENPAALASNPGKRIAACWEPTVIATIIIPKVLRLPNRFFSQRALLKYRLPLREIIVDFYNELKSITSGYATFDYEDSEYQQSDLVKMDILLNGQPVDAMATIVHNQKAQRVGRELVDKLKKFIERQMFEITIQAAVGSKVIARETLSAMRKNVLAKCYGGDITRKKKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVSNSK</aaseq>

Gene Sequence

<dnaseqindica>1..294#702..1452#1617..1773#1868..1922#2243..2310#2385..2485#2560..2590#2745..2858#3570..3710#3910..3969#4666..4840#ATGGCCGGCGCCGCCGCGCTCCGGCGATCCGCGCGCCGTGTCGTCCGGCCAGGCGCCTACGCCTTGTCCCGGGCGCTACAGCACCCTGAGCGCCTCCTCTCCTCCCAGGCTTCGCCGGACCGCGGCGGGGTGCTGGGTTCGGAGCTTGGGCGGTATCCCCCGGAGAGGGTCAGGAACTTCTCCATCATCGCGCACGTCGACCACGGCAAGTCCACGCTCGCCGACCGGTTGCTGGAGCTCACCGGCACCATCAAGAAGGGCCATGGCCAACCTCAGTACCTCGACAAGTTACAGGTGTGAGAACAAACTTGCCGTTTTGAAAAAAATGGGGACGCGTTGAGTGAGAAATTGGTAGCTTTGATTTGTGGTTCGTATTCCATAAGCTTATTGGATAAATGCACATACCGGAATTAATCAATTGGAAGTTACTCCAGAATTTAGTTGAGTTGAACTTCGTTATGTTTGGTGACCGGTAGTAATAGCAAAGATAATCCTTGTACTCACTGTGTTGACTTTTGAGCATACTGGATCTTAAGTGACTATTCCTTAATTGGCATCTCATTTCATTTGAGATGATGACAGCACTAGCATAACAGATAGTGTTCATTTTCAGTGGATATTTTCTTACTGAAATTGAAAAGAAATATTTATACTGTGTGCATTTGTCATAACATTTGTATGATTGTATCTGTTCTCTACAGGTAGAGAGAGAGAGGGGAATCACAGTCAAAGCACAAACAGCAACTATGTTCTACAGACATGCTAACAACCAACTTCCTGCATCTGATCAGCCAGATGCTCCAAGCTATTTGCTTAACTTGATTGATACTCCTGGGCATGTGGATTTCAGCTACGAAGTATCCAGGTCGCTTGCAGCTTGTCAGGGTGCTCTTTTAGTAGTTGATGCAGCCCAAGGTGTCCAAGCACAAACAATTGCAAACTTCTACCTTGCATTTGAGTCGAATCTAAGCATCATTCCTGTTATTAATAAGATTGATCAGCCTACCGCTGATCCAGATAATGTAAAGGCTCAACTGAAGAGGTTATTTGACATTGATCCAAGTGAAGCTCTGCTAACTTCAGCTAAAACTGGTCAGGGCCTTAGCCAGGTCTTGCCTGCTGTTATTGAGCGGATTCCTTCCCCACCTGGAAAATGTGATTCACCTGTACGCATGCTCCTCTTAGATTCATACTATGATGAGTATAAAGGGGTGATATGCCATGTTGCTGTTGTGGATGGTGCTCTCCACAAAGGAGATAAGATTGCATCTGCCGCAACTGGTCGCACATATGAAGTCCTTGATGTGGGCATTATGCATCCAGAGCTTACTCCTACCGGTGTGCTTTACACTGGACAAGTTGGATATGTCATAAGCGGAATGCGTTCAACTAAAGAAGCACGAATTGGTGATACTCTTCATCAAGCAAAGAGTATTGTCGAACCACTTCCTGGTATGGCATCTCCTACCCTCCTGAAATAGTTTTGTCATTCTATTAGTTTTAACTAGTCTGATTCAGCCTGATAAAACACTGCAGTTGGTACATAAAAAAAGTCTAATGCTTTGTTGCTTTAGTTTTTTTTTTATGTTGTCACTATATAGAGAATATCCTTTCAGGTTTCAAGCCTGCTAGACACATGGTCTTCTCTGGTCTATACCCAGCTGATGGCTCTGACTTTGACGCTCTTAGCCATGCAATTGAAAAACTAACATGTAACGATGCGAGTGTGTCTGTTACAAAAGAGACAAGCACTGCACTTGGCATGGGCTTCAGGTATCAACTTTTTTGCATGTGAAGTATAAATATTAAAAAAAATTCCATTGTTTTATGCTATCATGTGGAGAAACATACTGTAATTCTTCTACAGATGTGGCTTTCTAGGATTACTACACATGGATGTATTTCATCAGCGGCTAGAACAAGTATACATCTTACTGTTTGTTTTTCAAATAATTGTCAATCTATTTTTGCTGACAGCAACTGACTGTGATCTTTGCATGTACTTTGATTTGGCATATCTTTTTTTTTTTACCCAACATGTTTTTCATGTTGATTTAATACTGAACCAGAGTAGTTTGCATCCAAAGAACTACATGTCGGTCAGTTGAATCATTGATGCATGCTTCTCTTCTCAGTAAATGATTTGGAAAACAAGGAAGATGTGCTTGCATCATGTGATGAACTGATTTCTATTCCCTATTATATTTCTTGAGGTTTTAATTTATTGTTGTGCCCTGTTAAGGAACATGGAGCTCAAGTCATATCGACAATACCGACAGTGCCATATATCTTTGAGTATGGTGATGGAAGGTGCAAAATTGCAATTATTATATTATATATACTTGTTCTCTGTTAGTTTTCTAATCATGGAGTGCTTTATCCAGCAAAGTGCAAGTCGAGAACCCTGCAGCTTTGGCTTCAAATCCTGGAAAGCGTATAGCAGCTTGTTGGGAACCAACAGTCATTGCAACAATTATTATTCCTAGTGAGTAAGATCTGCTTCCTTTCTCATACACTCTTGTTAGTTCATGAATATACATATTTATATTTATAAACCAGAAGTCTTGAGACTACCCAACCGCTTTTTCAGGTATGTGGGGCCAGTAATTATGCTTTGTTCAGAGAGGAGGGGCGAGCAGCAAGAATATACATTCATTGATGCGTAATAGTTTACTCCAGAAATCATTTTCTTAAAATAAATTTTGTTCTTGCCTTACAGGGCTATGTTTGTTTGTTTGATGCAGCCAAAGGGCTTTGTTGAAGTACCGATTACCATTGAGGGAAATCATTGTGGATTTCTACAATGAACTGAAAAGCATAACATCTGGATATGCTACTTTTGATTATGAAGATTCTGAGTAAGTTTCCTTTTCAACTCGGTAACCATACATGGTCTTGTCTAATCTTTTGATTTTTTTTAAACATTCTGAGATGGAAAGGCATGTATCTGTTTTCTTTCATCAGGTGGCCTTATTATTCTTTTCTGTTTTTTTGCTCCTTTTTGTGATGATTATTTTGGAGGCCTGTTTTATGCCCCATTCCTGAAATTCGTACTACACCTTGCTCACAATTTTCTACTCCCTCCCTTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCATATTGATATTAATGAATCTAGATAGATATATGTCTAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGAAGTATTTACAGTTCTTGTCTCTACTCCAGCATACTAAGTACTAGTAGTCACCTCACTTTCTTTAAAAAAAAGCAAAGTTGTAAGCACAAATAGAAAGCTCTCTTGGGAGTTTAGGCATCTAGTGTTTTGGCCTTTTGAGAGTGTTTCCTGATGAATAATTATTACCAAATAATGTGAACTATAATCACATTCTGGAGATAATTTGCATTTCATGCGACTTATATTATCAAATTGCATGTAGGTATATTTCTATGGTTAAAATTAAATGGGTGACAAAGCAGGAAAAAATGCCACTATGGATGGCTGTTTATTTTCTTGTTTAACTCCCTTTAATTTACTTCAACAGGTACCAACAGTCTGATCTTGTTAAGATGGATATTTTACTTAATGGTCAGCCTGTTGATGCTATGGCAACAATAGTCCACAACCAGAAAGCTCAGAGAGTTGGACGAGAATTAGTGGATAAACTCAAGAAATTCATAGAACGGTATTCATCATGCTCCTTATTGTGGAAATCCTGATGCACAGATTATCGCTTTTATAATATTTCCATATATTATTAGGGAACGACAAACATAATCGTGATTGCTGCCTATATTCTTTTATCGTTGTACAGAATGTCAAAAATTTTCACCCATCCATTACCGCCATCCTTTTTCGTTATGCTTTTGTCTCTGATTATGCAGGCAAATGTTTGAGATCACTATACAAGCCGCAGTTGGTTCAAAGGTTATCGCAAGGGAAACGTAAGATAGTTAAAACCTGCTGCTGTTTTTTTTCCCTTACAAGTTAACAGCACGATTATTTTTAATGGACTGTGTTTATTCCCTAGCTTGTTGAAGTTATTATTTGCATGCACATCACTCTACAGCAAGGGAATTCATAGAAAATCACTTATCTGTCCATGAGAACTGATATTTTTTTCTAGTTGGGATGCACTTCCAACTCCCAAGTAAAATTGTGTTTGCCCATTCACATTTACCTTCTAAGTAGAACAATTAGATATGCTCTTTGGAGCTTGGAACATCCTAGGTACTTGGTAGTATTTGGTGTAAAGATAATCACTGGAGATGTTTCCTGGAAAAAAAGCGTTTAGAAAGCTAACCTTTCTTAGAGCCGATAATTTTGAATAGAACTATTGTGAACCTCTATTGGTCTCTAAGCAGAACTGGCTGCAAACTACAACCATACAGCCTTGGTAAATCTGTTCCATGATCTGATCTTACTTGGTCATCTGTGAAAGACCTGGACATAATATTCCATGCATGACTCTCAGAGACTCAGATTATTTACCATGCACTTAGTTTCCCGGTCTTAATTGTGTCTGTAATGTCATTCAGTTTCATGGTAAATGTTATGGTAACTATAAGGTTCATTCCGTTCATGTAAAATTCTGTGCATTTGTGTAAATACTTAAATATGCTATCTTGCATTGCTTCCAGTCTGTCAGCAATGAGAAAGAACGTTCTGGCCAAGTGCTATGGTGGTGATATTACTCGCAAAAAGAAGTTGCTAGAGAAGCAAAAAGAAGGGAAGAAGCGCATGAAGCGTGTAGGGTCCGTTGATATTCCTCAAGAAGCATTTCATGAGCTATTAAAGGTCTCCAATTCAAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022282