BGIOSGA022295

From RiceWiki
Revision as of 13:15, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022295| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022295, complete gene.| tag = OS11G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022295

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022295, complete gene.

LocusTag

OS11G0644800

Ensembl Transcript ID

BGIOSGA022295-TA

Ensembl Protein ID

BGIOSGA022295-PA

Length

5724

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2679402..2685125

Sequence Coding Region

2679402..2679419,2679545..2679879,2682975..2683317,2683920..2684132,2684221..2684280
,2684372..2684527,2684624..2684717,2684986..2685125

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2679402..2685125 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2679402..2685125 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCCAACTGCACAGGTTGCGGCGGCGCCGGTGCAGGAGCAGGAGAAATGCAACGGCGGCGGCGGAGGCGGGTTTAGGGGTGCGGCGGTGAGGTGCCACCCGGCTCTGTCGACGGAGAAGAAGGCGTCGATCAGGGGCGTCGTCGGGGAGCTGCTCGGTGCTGCGGCGGCGGCGGCCGGCGCCGGCGAGGAGAGGAGGAGGAGCCTCATCTCGCTCGGCGTCGGCGACGCGTCCTCGCACGCCTGCTTCAGGCTCGGCGGCGAGTTCGCGGCCGACGCCGTCGCCGACGCGGCCAGGTCCGGGGTGTTCGACTGCTACGCGCCGTCGTGCGGCTTCCCGGCCGCTCGCCGCGCCGTCGCCGACCACCTGTCCGCCGGCGCGCGCCACCGCACCCGCGACGCCGACGTGTTCATGACGGCCGGCGGCACGGGCGCGATCACCGCGATCGCGACGGTGCTCGGCGGCGCGCCGGGGGCGAACGTCCTGCTGCCGCGGCCGGGCTTCGCGCCGTACGAGGCGGCCTGTGAGCTCGCCGGCGCCGAGCCGCGGTTCTACGACCTCCTGCCGCGGCGGGGCTGGGAGGCCGACCTCGCCGGCGTTCGCGCCATGGCCGACGGCGCGACGGCGGCCATCGTCGTCATCAACCCCAACAATCCCTGCGGCGCGGTGTACTCTGCACAGCACCTTTTTCAGATTGCTGAAACAGCGAGAGAATTGGGGATCCCAATCATAGCAGATGAGGTGTATGCACATATGGTGTTTGGTGGGAGCAAGTTTGTGCCAATGGCTACCTTTGCACATATCACACCAGTAATCACCATTGGAGCACTATCAAAGAGATTCATGCTGCCAGGATGGCGACTTGGTTGGTTGGCCTTCTGTGACCCCAATGGTGCACTCAAGCATGTCAGAAATGCAACAGAAATGCTACTGAATGTGACTTCAGGCCCTGCGTCCATAGTTCAGGCTGCAGTTCCTAAGATTCTCTCAAACGAACACAATGAATTCCATCGAAACGTTGTGAACTTGCTTGAGTCTGCAGCTGATGCTCTCTACAGAAGAGTGAACCAGATTGAAGCTCTGCAGTGCTACTCAAAACCTCATGGCTCCATGTTCATGATGGTTGAAGTCAACACTTCACTTCTGTTCGGTGTTGAAGATGACATGGACTTCGCTCGTGAATTGATTAAAGAAGAATCTGTCCTAGTTTTACCTGGTTCTGTAATTGGGTTAAAGAACTGGATTAGGATATTCTTTGGGGCACCTACTAGTGTGATACTTGAAGCCTGTGATAGGATTGAAGCATTCTGCCAAAAAAGAGCAGTTCAAGTAAAGCTACTGAAAAAGAAGTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAPTAQVAAAPVQEQEKCNGGGGGGFRGAAVRCHPALSTEKKASIRGVVGELLGAAAAAAGAGEERRRSLISLGVGDASSHACFRLGGEFAADAVADAARSGVFDCYAPSCGFPAARRAVADHLSAGARHRTRDADVFMTAGGTGAITAIATVLGGAPGANVLLPRPGFAPYEAACELAGAEPRFYDLLPRRGWEADLAGVRAMADGATAAIVVINPNNPCGAVYSAQHLFQIAETARELGIPIIADEVYAHMVFGGSKFVPMATFAHITPVITIGALSKRFMLPGWRLGWLAFCDPNGALKHVRNATEMLLNVTSGPASIVQAAVPKILSNEHNEFHRNVVNLLESAADALYRRVNQIEALQCYSKPHGSMFMMVEVNTSLLFGVEDDMDFARELIKEESVLVLPGSVIGLKNWIRIFFGAPTSVILEACDRIEAFCQKRAVQVKLLKKKF</aaseq>

Gene Sequence

<dnaseqindica>1..18#144..478#3574..3916#4519..4731#4820..4879#4971..5126#5223..5316#5585..5724#ATGGCTCCAACTGCACAGGCATGTTGGCTACCAACCTAGCTTACAATTAACCTGCCGTTTCTTGGGAATTTTACAGTTAAACTGAATGTGCATATGCATTCATGGTGACTAGCTAATTCTTTGGTTTCTTGATACTTAATTAGGTTGCGGCGGCGCCGGTGCAGGAGCAGGAGAAATGCAACGGCGGCGGCGGAGGCGGGTTTAGGGGTGCGGCGGTGAGGTGCCACCCGGCTCTGTCGACGGAGAAGAAGGCGTCGATCAGGGGCGTCGTCGGGGAGCTGCTCGGTGCTGCGGCGGCGGCGGCCGGCGCCGGCGAGGAGAGGAGGAGGAGCCTCATCTCGCTCGGCGTCGGCGACGCGTCCTCGCACGCCTGCTTCAGGCTCGGCGGCGAGTTCGCGGCCGACGCCGTCGCCGACGCGGCCAGGTCCGGGGTGTTCGACTGCTACGCGCCGTCGTGCGGCTTCCCGGCCGCTCGCCGGTGAGTATCCATGTCTCTGCTTCTTCTTGTTCATGTTCAAGTTAATTAATTCTTTTAATTTCCTGTTGTTTTGTGAGTGAATTTAATTTGCAAGTATTCGTATGTTAATCTCGATGCAAATTAGCATAGTACAATTACTGATTTCTTGACATTGGATATATAGTGTTCTGAGTATTAATTAGCACTACAAGCACGATCACAAAAAGCGGACGTCTTAGATGTATGCAATCAAATGTGTTGATGCTGACAAGAGATAAATTGTCCGAATTAAGATGATGATTAAATATGTATAAGCTAAGAACGGTATGATTAAATTCATTCATAGTTTCCCCGCAAAAAAAAAATTCATTCATAGTTTCATACTAGTATAGTATAGATGTTAGATATATGAAGAAAGAAAATTGAATGATCAAACTGGTATGTTTTTTTTTTGAATTTGAAAAGTCAAAGATATATACCCCTCCGTCCCAAAATAGGATCCAATCAATATTACATTGCTATATTTTGGGATAGATGGAGTAATGTTTCATTGTTTCTTGAGAAAGGTAACAATACCTTAGCATATTTAGTAGAGTAATAAATTCTTGTAGATGAGAGTTGTACATGATTATGTATACACCTATGTTCCTCTTAGCCTAAATTGGGTAGTAAAAAAGAAACTGAAAACAGACACTCTACAGTACATTTGGATCTGAAATACTTAAATATTGTGTTGCGTACTTGTGTCCTTCCATTTGTCCATTCCTTTATGGAAAGATAGTGATTTGGTTATTGCTAGAACACATGGGATCAGTTATCTGGCCCTGTGGTACTTGCAATCGCATAGTACTACCTCCATATTTTAATCTATGACGCCGTTGACTTTTTATCCAACGTTTGACCATTTGTCTTATTCAAAAAATTTATGCAATTTTCATTTATTTTATTGTGACTAGATTCATCATCGAATGTTCTTTAAGTATGATATAAATATTTTATTGTGACTAGGATCTAAAATATAAATGCACAAAAATTTTGAATAAAACAAATGGTCAAACGTTGGTCGAAAAGTCAACGGCATCATACATAAAATACGAAGGGAGTATAAAATAAGAGAAATTTTATAATACTTTTAAAAAACGGTCCTTAAGAAACTAACTCAAAGTACTTAAATAAACTACAATGAAAAAAACAAACAAGAAAATCAACTTCAATAATATAATTTAAAATGTATTTTTTCTTATAAGCATAAGCATAATTGTAACAATTAATGGAACCAATATATCATGGTAGATGAGAGTTAATTATGTATGATTAATACACACCTATGTTCCTCTTAGCCTAAACCAGAAAGTAAATAAAAGCCCCAAAACAGAAACTCTACGGTACATTTGGATCTCAAGTCTTCGATCAGAAACTTCGTTTTGTACTTGTGTATGCTGTGCTTGAGAACGACAGTGATGGTCCACGGTGCTTTTGTCCCTTCCTTTGTGCTAGAGAAAATTGTATGGTCATTGATAGAACACATATACTCCTATATGGGAGCAGTTATCTTGGCACTGTGGTACTTGCAATCGCATATGGTGCATGCCTATACTGTTAATGACAGTACAAGCACACCAACATGACAAGGACATTGGGCCATGATATAAATCTTGGCCCCATCTTGGACATTGCATCATTGTTGTTGCAGTACAGTAGTGCATTATATTATATTGTCATCACAATTCGTAGGATCGGATATGAATATTAGGGATGGAGCTATAGCATTTGATAACCCTAGACTCGTCGGCAGGCAAGCATGGTTAACGGGAATTGTCTACAGTATTGTATCTACATCAGGTGTCGCTAACATGTGAGATCTGATTCACGTGTGAGCCACTTCCATTGTAGAAGCAATACTGAATTGGATCGGGGTGCACACATGGGAGCTCTAAGTAACACAGCCTATATGGGCTGCACGATCACGATCGAACTTGCTGAGACCACACATTGTTTTAAAATGTCCATTACCATTTTACCCAATAACTTTTACATTTGTTAAACTATAGTGAATGAAAGTTTTGTCGTTACACTTGTTATGCAACAGGATTTATCAATTTTTTAAGTCCTTACAACTTCATTTTAAAACATAAGTTATTAAAATTTTAAAGACGAATAGTGCCATGATGGCAATCATTTAAGTACGAAGGGAGTACTAGAAGATATAGGTGTTATATTGCTGACGTATAGCATGCTTGGGTTCAGCCACGTGGAAGTGGGTCCTTATAGAACATAAATTCCATAGCTTAATTAATCTCACGGGAACTAAGAAAAAGTACATACTTTAATTTAAAAATAAAAGTACAGAATTTAGTGGCCACCTATATCCAGAACATATTTTCTCCGTGTTGTCCACATTATTTGGTAGTGTTAGGATTTTTAATTTCCATTTTTTTAACTTAGTTTATTTCCATGTTAGTTATAGTCCCATACTGTTTGTTCACGGGTGACTACTGCCAACTGCGTATGAACGCTTTTGTTTGGTACGTATGTATAATAATTCCGAACGCTTTTTTTCTGAGCAATCTTTTTCCATTAGCGCGTACCCAACCACACGGAAAACGGAACGATCCATTAGCGTGTGATTAACTAAGTATTAGCTAATTTTTTTTAAAAAAATGTATTAATTTAATTTTTTAAGCAACTTTCATATAGAATTTTTTTCAAAAAAAACCGCACCGTTTAGCAGTTTGAAAAGTGTGTGCGCGGAAAGCGAATGAGGGGTTAGGAAAAGGGGCATCCGAACGCACCATATATTTGGTTTTGCACCTCATGTCTTTCATATAACTAGAGCAAGAATCCATTGTATTTGGAATTGAGATCTTCTGACTAAAGTCACATGACTTTGAGTTCCTGACATGTGGGTCCACAGGTTAGTGGCTATAAAGTCATCAGAATTAAAGACAGAGGATCTCAATCCTTCCATTTGTACAACTTAATATGCTCTTCTCTTTGTAATTGTATGAGTGGAGTAGATGCTATCCTAATTAGTGAAGTGAATGCCTCGTTAATTCTACTGAATCAGTGAAACTAATTAATATCCATATCTGCAATTCTCGTGCGCCGGAAACCAGCGCCGTCGCCGACCACCTGTCCGCCGGCGCGCGCCACCGCACCCGCGACGCCGACGTGTTCATGACGGCCGGCGGCACGGGCGCGATCACCGCGATCGCGACGGTGCTCGGCGGCGCGCCGGGGGCGAACGTCCTGCTGCCGCGGCCGGGCTTCGCGCCGTACGAGGCGGCCTGTGAGCTCGCCGGCGCCGAGCCGCGGTTCTACGACCTCCTGCCGCGGCGGGGCTGGGAGGCCGACCTCGCCGGCGTTCGCGCCATGGCCGACGGCGCGACGGCGGCCATCGTCGTCATCAACCCCAACAATCCCTGCGGCGCGGTGTACTCTGCACAGCACCTTTTTCAGGTAAGTGATCATTTAACTGCACACTTAAATACGTGTCTAAATTTATTAACATATATATAAATGTAGGCAATACTAGAAAGTTCTACATTGTGAAACGGATGGAGTATTATATGTCTTCAGAATAGAGAAGCATCTAAAAAAATATATCCAACTGGTTTTACAAGTTTTACATTGATAATTTGAAACCATTTCACGTTTATGTGTCTGAAAGATATTTTTTTTCGCGAACACGTAAAAAAAATTGCATGTTAGTATATTAGAAGAAAGTATTGTTTTAGTTACACAACACAACAGACCAGACTGGCCATTGCCGGGTTACAAGGTAAAGGACTGCTAGGGCGAAAAGACGGAAAAATAAAACTGAAAGTTGCTGCTCCTATATAGAGGGAGATAGAGGGTATATGCATCTGAAAGATACATACGCAAATGTACAATTATGATAGCTGAATAAAAAATTTTACAGTAGAGATACCAAAATTTTCAGTGTAAGTACAGTACCAAAAATTACACTAAATCCCTACGCACTAAAACATGCCCATGAACAAAGTATGCAGAACTGCCATCTCTTATTAGTACCAACTATATCTCGCTGGATTTTGTAGATTGCTGAAACAGCGAGAGAATTGGGGATCCCAATCATAGCAGATGAGGTGTATGCACATATGGTGTTTGGTGGGAGCAAGTTTGTGCCAATGGCTACCTTTGCACATATCACACCAGTAATCACCATTGGAGCACTATCAAAGAGATTCATGCTGCCAGGATGGCGACTTGGTTGGTTGGCCTTCTGTGACCCCAATGGTGCACTCAAGCATGTAAGGCAGTAAACTCTTTTCATGTTTTTAAATTCTTGTTTGTATGAAAAATTCACATTTACATATTCATAATTCTGTTCTTCAAAAGGTCAGAAATGCAACAGAAATGCTACTGAATGTGACTTCAGGCCCTGCGTCCATAGTTCAGGTCAGAAACAAATTGTAATTTCTTTACCAACTACAATGAATGCATAGTGTGGGTACTAAACATGGTGAAATATTTTTTGTCACACATGCAGGCTGCAGTTCCTAAGATTCTCTCAAACGAACACAATGAATTCCATCGAAACGTTGTGAACTTGCTTGAGTCTGCAGCTGATGCTCTCTACAGAAGAGTGAACCAGATTGAAGCTCTGCAGTGCTACTCAAAACCTCATGGCTCCATGTTCATGATGGTTGGTCTGAAGATAAACTGATTTGAGTAACTGATTTGAGTAATTCCTAATGATTTATTGCTTTATCATTGAATCGATGCTCTCAAAATCATTCAGGTTGAAGTCAACACTTCACTTCTGTTCGGTGTTGAAGATGACATGGACTTCGCTCGTGAATTGATTAAAGAAGAATCTGTCCTAGTTTTACCTGGTATAATTTTGACTACTTCCATGGATTTATGATCTCACTATTAATTTCTACGATAAGTTACTGGTTTTTTAGTGTACTGACTACCGAAAATGAAAATTCTGTAAATTGGTTGAAATCATATTGTTGTTTTTTTAGATAATAATGGAAGCTTTATTTATCTCAATCAATTACAATATTGTGGTTTGGGCCTCAATCAAGTACAAGATTAGTTTTGGCCTCTTGATTTATCTGAATTCACAATTTCGATCTCTGCTATTTCCTTGCACAGGTTCTGTAATTGGGTTAAAGAACTGGATTAGGATATTCTTTGGGGCACCTACTAGTGTGATACTTGAAGCCTGTGATAGGATTGAAGCATTCTGCCAAAAAAGAGCAGTTCAAGTAAAGCTACTGAAAAAGAAGTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022295