BGIOSGA022333

From RiceWiki
Revision as of 13:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022333| Description = cDNA clone:001-002-H10, full insert sequencecDNA| Definition = Oryza sativa Indica Group BGIOSGA022333, complete gene....")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022333

Description

cDNA clone:001-002-H10, full insert sequencecDNA

Definition

Oryza sativa Indica Group BGIOSGA022333, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA022333-TA

Ensembl Protein ID

BGIOSGA022333-PA

Length

2434

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3238552..3240985

Sequence Coding Region

3238552..3238674,3239832..3239969,3240851..3240985

Genome Context

<gbrowseImage1> name=IndicaChromosome06:3238552..3240985 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:3238552..3240985 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTGGCAGGCGTACGTCGACGACCACCTGATGTGCGAGATAGACGGCAACCACCTCACCGCCGCCGCCATCGTCGGCCACGACGGCAGCGTCTGGGCGCAGTCCCCCAACTTCCCGCAGTACAAGCCTGAGGAGATTACTGGCATCATGAAGGACTTTGATGAACCCGGCAGTCTCGCACCAACTGGTCTTTTCCTTGGGGGCACAAAATACATGGTGATCCAAGGTGAACCAGGGGTTGTCATCCGAGGAAAGAAGGGCACTGGAGGCATATGTGTCAAGAAGACTGGCCTGTCGTTGATTCTTGGAATCTATGATGAGCCGATGACCCCAGGCCAGTGCAACATGATTGTGGAGAGGCTTGGCGATTATCTGATCGAGCAGGGTTGCTAA</cdnaseq>

Protein Sequence

<aaseq>MSWQAYVDDHLMCEIDGNHLTAAAIVGHDGSVWAQSPNFPQYKPEEITGIMKDFDEPGSLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGICVKKTGLSLILGIYDEPMTPGQCNMIVERLGDYLIEQGC</aaseq>

Gene Sequence

<dnaseqindica>1..123#1281..1418#2300..2434#ATGTCGTGGCAGGCGTACGTCGACGACCACCTGATGTGCGAGATAGACGGCAACCACCTCACCGCCGCCGCCATCGTCGGCCACGACGGCAGCGTCTGGGCGCAGTCCCCCAACTTCCCGCAGGTAATCCCATCTCCTCTCCTCTCCCCGTCTCGTTTCCATCTGCTACTTGTTTCGTTCGTGGGCGTGGGCGTGGTGTTAGATCTGCCCACGCGCGGATCTAAAGGCCCGCGATCCCGATCGGGCGCGGGCTGGGATCCGGATCTTGGCTGATGATGATCTAGGTGTGGATCTTGTACGCTTATGGTGTTGTTTCCGCCGCGCTTTCGCTTGATAGGAAAGGATCTTTGTAGGAGGGGAATATTTCTGCTGTGGATAGGAGATGTGTTTTTGAGTTTGAGTTGAACCAATGGTGGAATCGCCGGTTGAAATAGCAAGATCAAATTCATTGCCATGCTACTGTTATCTGTTGTGGGAGGTGTATACTAGCGATTGCTATCTGTTGTGGGAGGGAAATACTAGCTGTGAATAGGAGATGCGTTTTGATTTTGAGTTGAATTAATGGTGGAATCGCCGGTGGGAACAGTAAGATCGAGTTCATTGGTGGGAGGGAAACTGGGAAACACCGAGGCGTTTTGAATTTGGGTTGAATTAATGGTGGAATCGCCGGTGGAAATAGCAAGATCGAGTTCATTGGCACGCAGATGTTATACCGTTCTGGTGAGGATTTAGTCTTCGATTCTAGAGAATTTCTTTAGTCCAGGGAATTCGAAGTCATACTACTAGCTGCATAGGAACTTATCATTTGTTATATGTGAATACCATGAAAACAATATCATTGATGGAATAGCTGCTTAAGGTTAGCTAAAGCATATTGGATATGTTTGTGTGGATCGTGGTGCTTAGAATGCTACACTATTTGGAATATTTCTTTGAGGGTGACATACTTCTCTGATGTACTAAGTGCGTATTTTATGTAATCATGTAGCTGTCTTGTGAAGTGCCTTTTTATATCGCATAGCTTTGTCCCCATCCTTTTGACCATTTGTAGCAGATCCAACATTACCGTAGATCTTACTTGACAGGCATATTATATGATTTTGTGGTGACGATAATAGCTATCTTGTTGCAATAGCGAGTGACTGAATTTACAACAGAGGTCTAATGTAGCGTGTCTTTGAATTCCATTAGAAGAATTTTTCACTTGAAAATTCTGTATAGATACTCCTATTCTGCCTTCTAAATTTTTCTTGTTTTCTGCATCTGGCGCTTTGTTGCAGTACAAGCCTGAGGAGATTACTGGCATCATGAAGGACTTTGATGAACCCGGCAGTCTCGCACCAACTGGTCTTTTCCTTGGGGGCACAAAATACATGGTGATCCAAGGTGAACCAGGGGTTGTCATCCGAGGAAAGAAGGTAAAGTTTTGTTTTTCAAATGAAACGTGTGTGATATCAGCAATGTTTTATGACTGTACTAGTTTTGACAGATTAACTGAATTCTTTATGTGTTTCTTTTTATGGCTCATATGAAGTTATGAACATGGTAAATGATATCGTTCCTATTTTAATCCTTAGGGAAGGTGTTATACCATGTTACCTCATTTATGAAAGCATGTTGCATCTAATTAAATGTTAAATAACGAAACGGCTGCTGGTTTATTCCTTAGTAGAGGAGTTATACTTGTATGCTAGGTTACCTCATTAATGAAAGCTTCTGATGAATACCTTGCTTTAGGGTGTCATTACTCATGGTCTGGTATACGTAGTCTGGAATCTAGAAGTTGACTTTATACAACTGCTAGGCAGGATTAATAGTCCTTGGCATGTATAGTCCTTATATTCATGTTGCTCAAAAAAATTCATTATGAAGTTGCAATAAAAGTTCTGCTTTCACTAGCACCATGTTGATTGCATCTTTGATTTGATGAGCAGTGGAGGTTGGATTATTTTTTTCCCTGTCTTTTCTCTAGCTGTCAATAACTCACAGGCTGCAGTCGTTAACTAGTCGAATAGACATTGAATGTTTAACGGAGAGTACCATTTATTAGTGGTTAAACTACTAGATTATTGCTGGTAAATATCTGTGGCAATTTCATACTATTTTGTTTGGGTATCCCTGCTCTGAATACTGTTTAACTAATGAAGAATGCATTTGTCGCAAGTTGCATGATTTTGTATGAAATTCCTATAACACTACAGAAACCTGTGGAATGCTTTTCAATTTGTTTCTCTGTTTATTTTCCATTTTTTTAAAAAAAAAATTTGGTCTATAACTCCCATCTGCATGTTTCTTACAGGGCACTGGAGGCATATGTGTCAAGAAGACTGGCCTGTCGTTGATTCTTGGAATCTATGATGAGCCGATGACCCCAGGCCAGTGCAACATGATTGTGGAGAGGCTTGGCGATTATCTGATCGAGCAGGGTTGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022333