Os11g0598500

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Revision as of 09:15, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0598500| Description = NB-ARC domain containing protein| Version = NM_001074748.1 GI:115486144 GeneID:4350851| Length = 3873 bp| Definitio...")
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Gene Name

Os11g0598500

Description

NB-ARC domain containing protein

Version

NM_001074748.1 GI:115486144 GeneID:4350851

Length

3873 bp

Definition

Oryza sativa Japonica Group Os11g0598500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:24704987..24708859

Sequence Coding Region

24704987..24708859

Expression

GEO Profiles:Os11g0598500

Genome Context

<gbrowseImage1> name=NC_008404:24704987..24708859 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:24704987..24708859 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactgagctcgcttctggcgccgtgagctcactgctggtggtcatccgcaacgaggcggctcttctcggcggtgtccgggacgacgtgcagttcatcaaggaggagatggagagcatgcacagcttcctggggcacctggccaggagcgctccacagggtggcgagcacgatgagcaggtgtgtacatggatgaaacaggtgcggctgctcgcccaggactgcaacaattgcatcgacctctacctgtactctgggaatccagagattcaccgcgccaagggcagactccggcgacacctctggtgggcttactggtacctgcgcaagatggtcgcgcagcaccgcgcggccatccagctatgccagctcaaggaccgggcgcgggacgtcggcgagcgacggatgaggtacggcgtggaggttccagccacgacaaaggctgctgcacctgacgcagaaggtggctatgctgctggagatgatgaagactatgaggatcattctgctcgaagggccgtctatgagccccccgctctggaagactacgtgaacgcaaaactattggagtgggcagaagaaattcctccagacgccattgagacgttgtccatcgccattgtggcaccggatacagataacaaggaagtccttgatcttgcacgcgatactttggttgttccaggcaactactaccatcgcagtatcacggtcaacgtcccggcggtgcacgccgattttttaccgctacgacctaaggagattctctactacatcttacgggagctcgagcccggatcccagaagcacgtcacatatcaaggtgacccttggcaagattactacaatatttactgtggcaaaaaaagggtgcttcataaaatcaaaaggaatatagaaaagatgaatgtttacaagaagcttgagaagatcaagagtgatattaaagatggacaacataagagtgacaagcagctgctgcttcaactacaaaagaagggtgtggatcaggtggatctacatgtactcgttcagctattgctgctccagtctcaacaagaccaagcaaacaacaaagcagtagacatgtataaattaccagagtggaactacgataacatcatgaaaatagcaaggaagcttaagaagcatatggaagcagacgaggagcttaatgagcaaattagtgtagaaaagagaacaactaagcaaggaggaggaggagagaacaaggaggagaaagacaaaggagatggagacagagaagaggggaaggaggagaacgagaaagacaaaggagaagcagacggagaaggagagcaggaggaggagatgaaggacaaggaaaaaggaggagaagagaggaaggaggagccgcaccacgagaagcaggagcacaagaaggaaaaggaagtgaaagaagaagagaggaaggaggagcagaacaaggagaaagaggagagggaagggacagaagaaaaacaagtaggaggaggggagaaaaaagaagaaaaagaagacggtgatgatgatggcgtcatcgacgacaattacgatgaggaggaggaggaggaggaagaagatgacgacccgattcatcttcatgaagctcaatacgtacaaattctactagaagtgttcccaaagatcaccagcagcaaggcccagcagcaggacaaatcagaggccaagcaagctacaaacaccgcaacgactacattggatgaggtacgaatcaaacaaatgatcaatgacgcaaaacgagatatcttaagggagctgcggggaggcaaatctgataagaatgaagcaacaggagaacctgatgttccacctgataagaatcaaccaacaggtgaacatgcaggtgttccggaccaaaatggagaggcttgttttgaagaattagagctgaagatcgaagaaatcaagcaggaacttaaagagcagctgaagatcaaagggatcgtggacaagatcaaacatcacttacagggtgagtgccccctcattatcctaaaagttgatgacatgatggatggatccagatgggaggagttcagaagggctttgagcctattagaatgcagtgccgatgcactgatcttcaccacagagagcaccgaacaggctaaaggatattgctatccaccgcgagaacctatagatcactgttctcatgttggtctctaccatcatacagtgctcgaacttactagcaagcagaagaataaaagcaactatgacccccggatttttcttgacatcttgaaggagtgtgaggggcatgaattctgcatgaggatcttcacccatgctgtgtatgctaaccccaagaagagcactgaagagttaagcaagctgcacagcaccctgcaggattcacaaaaatcatttgacgcaatagctaagaatatgctcatgtactcttacaatgatctgcctaaagaatacaaatcctgcttgttgtacctagctatcttccccaagggacagaagatcaggcggtcaaccttgattggacggtgggttacagaagggttgacattcaaggaagattggcccagttctgtgcgtcaggcaaatcaatgttttgatgccctcatccgtcggtggcttgtttatcctgctgatattggtgccacaggaaagatcaagagctgtgaagtaggtgatctagttcatgggttcattaccacaattgctagaaaacaacacattgtggagacacgcctatcacatcacttggctcgccacttctccattttcaatgatctccgactccgcagttccgatagaattcaaacgttcttccaaagcctctcacaatcatctcgagtatccctactgaaggttctagatctagaaggttgtcagtgctttggtgttaagaatcagaggtacctcaaggacatctgcaacaagatgttactgctcaagtatctgagcctaaagggaacaaatattacccaactgcccagagaaatcaactgcctccgtgagctagaggtattggatatccgagaaaccatggtgccagcaaatgcaacggttaatgtcctgctcttgaagctgaagcgtctacttgctggtcacattgacccaagtctaagaaattttcgcactagcgttcatattcctcacaggatagacaagatggtaaacatagaggtactatctaatgtcaaggcccagcgcagtgatgatttggaagatattggaaagctatggcagctgaggaagctaggtgtggttattaatgctaagaaaagtcacctcgagaagttgcttaaagcaatcagcgacctacatgagtgcatccgttctctgacaatcactattcccacaaccacactcgagggtactccttcaaacccagagttaccagatcatattgactctaaccttccccatcccaagaaacttgagagtctaagcatcagtggagccaggtatctttttccattgttgatcaaaagtgataataacaagcttgccaaggtaactctaagtagcacacaactgaaccaagatgatctggaggtcctcgccaagctacccaagttacagtgtgttaggctccgacacatttcatgcacagagagcatgctcatcttcaagaaagatgatttcaaatgtctcaagtaccttcttattgagggctttaacttgactaatatcacttttgagaatagatcagcctgtgagctcgagaagatggttttatcttccaccagcatagagtctatctctggagttgataggcttccaaaattcaaagagcttgagttgaacaacagccctgtcccgaatgaggtgaaagaagccattgaaaacaataaaaggataaatcttaaatgtaatgaaccatga</cdnaseq>

Protein Sequence

<aaseq>MTELASGAVSSLLVVIRNEAALLGGVRDDVQFIKEEMESMHSFL GHLARSAPQGGEHDEQVCTWMKQVRLLAQDCNNCIDLYLYSGNPEIHRAKGRLRRHLW WAYWYLRKMVAQHRAAIQLCQLKDRARDVGERRMRYGVEVPATTKAAAPDAEGGYAAG DDEDYEDHSARRAVYEPPALEDYVNAKLLEWAEEIPPDAIETLSIAIVAPDTDNKEVL DLARDTLVVPGNYYHRSITVNVPAVHADFLPLRPKEILYYILRELEPGSQKHVTYQGD PWQDYYNIYCGKKRVLHKIKRNIEKMNVYKKLEKIKSDIKDGQHKSDKQLLLQLQKKG VDQVDLHVLVQLLLLQSQQDQANNKAVDMYKLPEWNYDNIMKIARKLKKHMEADEELN EQISVEKRTTKQGGGGENKEEKDKGDGDREEGKEENEKDKGEADGEGEQEEEMKDKEK GGEERKEEPHHEKQEHKKEKEVKEEERKEEQNKEKEEREGTEEKQVGGGEKKEEKEDG DDDGVIDDNYDEEEEEEEEDDDPIHLHEAQYVQILLEVFPKITSSKAQQQDKSEAKQA TNTATTTLDEVRIKQMINDAKRDILRELRGGKSDKNEATGEPDVPPDKNQPTGEHAGV PDQNGEACFEELELKIEEIKQELKEQLKIKGIVDKIKHHLQGECPLIILKVDDMMDGS RWEEFRRALSLLECSADALIFTTESTEQAKGYCYPPREPIDHCSHVGLYHHTVLELTS KQKNKSNYDPRIFLDILKECEGHEFCMRIFTHAVYANPKKSTEELSKLHSTLQDSQKS FDAIAKNMLMYSYNDLPKEYKSCLLYLAIFPKGQKIRRSTLIGRWVTEGLTFKEDWPS SVRQANQCFDALIRRWLVYPADIGATGKIKSCEVGDLVHGFITTIARKQHIVETRLSH HLARHFSIFNDLRLRSSDRIQTFFQSLSQSSRVSLLKVLDLEGCQCFGVKNQRYLKDI CNKMLLLKYLSLKGTNITQLPREINCLRELEVLDIRETMVPANATVNVLLLKLKRLLA GHIDPSLRNFRTSVHIPHRIDKMVNIEVLSNVKAQRSDDLEDIGKLWQLRKLGVVINA KKSHLEKLLKAISDLHECIRSLTITIPTTTLEGTPSNPELPDHIDSNLPHPKKLESLS ISGARYLFPLLIKSDNNKLAKVTLSSTQLNQDDLEVLAKLPKLQCVRLRHISCTESML IFKKDDFKCLKYLLIEGFNLTNITFENRSACELEKMVLSSTSIESISGVDRLPKFKEL ELNNSPVPNEVKEAIENNKRINLKCNEP</aaseq>

Gene Sequence

<dnaseqindica>1..3873#atgactgagctcgcttctggcgccgtgagctcactgctggtggtcatccgcaacgaggcggctcttctcggcggtgtccgggacgacgtgcagttcatcaaggaggagatggagagcatgcacagcttcctggggcacctggccaggagcgctccacagggtggcgagcacgatgagcaggtgtgtacatggatgaaacaggtgcggctgctcgcccaggactgcaacaattgcatcgacctctacctgtactctgggaatccagagattcaccgcgccaagggcagactccggcgacacctctggtgggcttactggtacctgcgcaagatggtcgcgcagcaccgcgcggccatccagctatgccagctcaaggaccgggcgcgggacgtcggcgagcgacggatgaggtacggcgtggaggttccagccacgacaaaggctgctgcacctgacgcagaaggtggctatgctgctggagatgatgaagactatgaggatcattctgctcgaagggccgtctatgagccccccgctctggaagactacgtgaacgcaaaactattggagtgggcagaagaaattcctccagacgccattgagacgttgtccatcgccattgtggcaccggatacagataacaaggaagtccttgatcttgcacgcgatactttggttgttccaggcaactactaccatcgcagtatcacggtcaacgtcccggcggtgcacgccgattttttaccgctacgacctaaggagattctctactacatcttacgggagctcgagcccggatcccagaagcacgtcacatatcaaggtgacccttggcaagattactacaatatttactgtggcaaaaaaagggtgcttcataaaatcaaaaggaatatagaaaagatgaatgtttacaagaagcttgagaagatcaagagtgatattaaagatggacaacataagagtgacaagcagctgctgcttcaactacaaaagaagggtgtggatcaggtggatctacatgtactcgttcagctattgctgctccagtctcaacaagaccaagcaaacaacaaagcagtagacatgtataaattaccagagtggaactacgataacatcatgaaaatagcaaggaagcttaagaagcatatggaagcagacgaggagcttaatgagcaaattagtgtagaaaagagaacaactaagcaaggaggaggaggagagaacaaggaggagaaagacaaaggagatggagacagagaagaggggaaggaggagaacgagaaagacaaaggagaagcagacggagaaggagagcaggaggaggagatgaaggacaaggaaaaaggaggagaagagaggaaggaggagccgcaccacgagaagcaggagcacaagaaggaaaaggaagtgaaagaagaagagaggaaggaggagcagaacaaggagaaagaggagagggaagggacagaagaaaaacaagtaggaggaggggagaaaaaagaagaaaaagaagacggtgatgatgatggcgtcatcgacgacaattacgatgaggaggaggaggaggaggaagaagatgacgacccgattcatcttcatgaagctcaatacgtacaaattctactagaagtgttcccaaagatcaccagcagcaaggcccagcagcaggacaaatcagaggccaagcaagctacaaacaccgcaacgactacattggatgaggtacgaatcaaacaaatgatcaatgacgcaaaacgagatatcttaagggagctgcggggaggcaaatctgataagaatgaagcaacaggagaacctgatgttccacctgataagaatcaaccaacaggtgaacatgcaggtgttccggaccaaaatggagaggcttgttttgaagaattagagctgaagatcgaagaaatcaagcaggaacttaaagagcagctgaagatcaaagggatcgtggacaagatcaaacatcacttacagggtgagtgccccctcattatcctaaaagttgatgacatgatggatggatccagatgggaggagttcagaagggctttgagcctattagaatgcagtgccgatgcactgatcttcaccacagagagcaccgaacaggctaaaggatattgctatccaccgcgagaacctatagatcactgttctcatgttggtctctaccatcatacagtgctcgaacttactagcaagcagaagaataaaagcaactatgacccccggatttttcttgacatcttgaaggagtgtgaggggcatgaattctgcatgaggatcttcacccatgctgtgtatgctaaccccaagaagagcactgaagagttaagcaagctgcacagcaccctgcaggattcacaaaaatcatttgacgcaatagctaagaatatgctcatgtactcttacaatgatctgcctaaagaatacaaatcctgcttgttgtacctagctatcttccccaagggacagaagatcaggcggtcaaccttgattggacggtgggttacagaagggttgacattcaaggaagattggcccagttctgtgcgtcaggcaaatcaatgttttgatgccctcatccgtcggtggcttgtttatcctgctgatattggtgccacaggaaagatcaagagctgtgaagtaggtgatctagttcatgggttcattaccacaattgctagaaaacaacacattgtggagacacgcctatcacatcacttggctcgccacttctccattttcaatgatctccgactccgcagttccgatagaattcaaacgttcttccaaagcctctcacaatcatctcgagtatccctactgaaggttctagatctagaaggttgtcagtgctttggtgttaagaatcagaggtacctcaaggacatctgcaacaagatgttactgctcaagtatctgagcctaaagggaacaaatattacccaactgcccagagaaatcaactgcctccgtgagctagaggtattggatatccgagaaaccatggtgccagcaaatgcaacggttaatgtcctgctcttgaagctgaagcgtctacttgctggtcacattgacccaagtctaagaaattttcgcactagcgttcatattcctcacaggatagacaagatggtaaacatagaggtactatctaatgtcaaggcccagcgcagtgatgatttggaagatattggaaagctatggcagctgaggaagctaggtgtggttattaatgctaagaaaagtcacctcgagaagttgcttaaagcaatcagcgacctacatgagtgcatccgttctctgacaatcactattcccacaaccacactcgagggtactccttcaaacccagagttaccagatcatattgactctaaccttccccatcccaagaaacttgagagtctaagcatcagtggagccaggtatctttttccattgttgatcaaaagtgataataacaagcttgccaaggtaactctaagtagcacacaactgaaccaagatgatctggaggtcctcgccaagctacccaagttacagtgtgttaggctccgacacatttcatgcacagagagcatgctcatcttcaagaaagatgatttcaaatgtctcaagtaccttcttattgagggctttaacttgactaatatcacttttgagaatagatcagcctgtgagctcgagaagatggttttatcttccaccagcatagagtctatctctggagttgataggcttccaaaattcaaagagcttgagttgaacaacagccctgtcccgaatgaggtgaaagaagccattgaaaacaataaaaggataaatcttaaatgtaatgaaccatga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0598500, RefSeq:Os11g0598500