Os11g0598800

From RiceWiki
Revision as of 09:15, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0598800| Description = Protein of unknown function DUF629 domain containing protein| Version = NM_001074749.1 GI:115486146 GeneID:4350852| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0598800

Description

Protein of unknown function DUF629 domain containing protein

Version

NM_001074749.1 GI:115486146 GeneID:4350852

Length

8040 bp

Definition

Oryza sativa Japonica Group Os11g0598800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:24718943..24726982

Sequence Coding Region

24719205..24720581,24720684..24720809,24720894..24720998,24721100..24721234,24721373..24721422
,24723062..24723120,24723394..24723503,24723586..24723807,24724516..24724749
,24724853..24724952,24725274..24725404,24726409..24726493,24726579..24726703

Expression

GEO Profiles:Os11g0598800

Genome Context

<gbrowseImage1> name=NC_008404:24718943..24726982 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:24718943..24726982 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactgggacagcgccacccccggcttccgcgcgcgggtgaaggacctcaccgggccactcccggccgagcgggaaggggttgacgtcaaggaggagaggctccatgaagcggtggagctcgccgtcgacttccactcggcgctcgcgtaccacgtcgtgggatacgtgcgcgccgcgctcggggaggacgagttggcgctcgattcccttcgcctcgccagggatctcgcccccagcgacctcggcatcgccttcaccctcgccaagaggtacgccgctagggagcagtttgatctggcggtggaagcgtgccaacgcgcgctcggccgaggtgacgctgatctcgtcgacccgcagctaaacgccgtcttcgagtcccgccacttggagccgagcaaagaggcgcggatctccactgctaagaatggcctcaagcaactccttatctccgccttgtcgaagatcgccatcccgatggcccgagatcgttggaacggcatgagcgaggagacgcgccgcagtttcctgacagtgggtattgacgagatggtagcatactgctgtgctaagccgtctgacgagtgtcagatgagtgctctcactggtgcactggactttgtgaaggacaatagagaatggatctgctggctgtgccctcaatgcgaaatgactttcctcactgcgaagaccttccagttgcatgttgaggatgatgagttctcccggtcccaggagttcaaagaatcgctgttgtttgtgccggagaggatatctgatgaacagacagagtttattaagtgttggactctgccatctgatgtcaatcctactgaagaagctgagggagaaaagatcttgaccaagatcaagagtacatttcagtacctcaaggataagaaggctctatctgttgatctttttgacaacctgatcaaattcacgaaaaaccggattgaagaagctgttacccaaaattatagctgcattacttctctggaccctggagggcttctgttgctggggacttatctggatttgcttcgattgagggttggtgatgccgagcaggatagccgtgataattttggtgggggagttgttcaagacgcttgcgttctatctataggtactgatgagaatgtgctaagaattactgatggttctagcaatcaagatgctctgtttagctggctatctagaccttcaagacaagacccatttacatcatgggacaacatgaggcaagcctgtctagataagggaactcatgcccttggaaagttgaatggaagggccgctgcattgatagagaaagttaatctgaaacgtggcttaacagcgacgcagacttatgaagcttattttggtgaaaaggctaaaatagatattgagatcatgcaattggttgccgaagttgataatttgaagaaaaacctcttggaagtctgcacttatgattatcgtgaaatcattttaccagctatgaaagatttcctatgggctaaactgtgtaatgttccacctaaaggggtctcaagttctgagggtgataaagtttctgaggcaagtattgaaaacagagatccagttcaagaagatattaatgcaggtctcaatatcatcagtcctgaatcagtcttacaagaagatgatggaaaagctaccgaggacaatctacagggtggagattcaactgtgcccgactgtaatggtgtcgaagagcttccaggcgatagtaaagtactgcaatctggcaagaagcttgagttgcctccaagagctaacacaagcaccttgggaagctcagagactcctatggaaaaggaaaacaagacttcctcaccatctgattactctggctcaaatgaagggagtgcaaacatttcgagcaatggagtaactggaactgcctatccaaatagtgaaaatgaactaaagtccttgttttcggctctcctgtcattgtggcacttaaggcccttcactgataagttcatgaagaaagcaccgctttatcctcattttggagtttctggaaaagatcggaattgtatgctgtgctacttgttccatagtttcaatgcttttagtgataagagtgactctacagcaacttatcgactgagctgtttgagaccttcttttatcaagattttagaagaggcgaatgtttcgttgaaggaggaaacaaatttggcagtgaaatatatagaaatagtgcttaacatggtgcatacatcagaaactgctaaatgtatcagcaacaacagtaaaaacattctgtacaaaacaacactcttctccagttgtcctgatcatagatgcctctcgcatgaactttttgggatgcacaagaatgcaacagagagcacatattttctcaacgttggtgcaagtgaactgcggaatattgagatgaacacttttgccgatgtcataaaatctgtcgacaagaagtttcactgtaatactgagagtaatgctcacaatcatccgccatgttacttcacaactgcttttggctatccaagtgagaatgatagccatcttgtctctggattactggtcagcatagctgcccccttggacattaatcctgtttatgaaggcctgcactcagaatgcaagtatactatggtttctgcggtatttcgtgctgaggggcgagatatctgccttgctcgagaagaggagaagtggcttgtatatgataactcactcagggaagtcaaggaatttgattcatgggagaaagtgcttgaagaatacagtcgttccagtttctgtccacagataatcttcttcgagcgtatcgacccagtttcagaggccgcgggcacagaagtcacagtctag</cdnaseq>

Protein Sequence

<aaseq>MDWDSATPGFRARVKDLTGPLPAEREGVDVKEERLHEAVELAVD FHSALAYHVVGYVRAALGEDELALDSLRLARDLAPSDLGIAFTLAKRYAAREQFDLAV EACQRALGRGDADLVDPQLNAVFESRHLEPSKEARISTAKNGLKQLLISALSKIAIPM ARDRWNGMSEETRRSFLTVGIDEMVAYCCAKPSDECQMSALTGALDFVKDNREWICWL CPQCEMTFLTAKTFQLHVEDDEFSRSQEFKESLLFVPERISDEQTEFIKCWTLPSDVN PTEEAEGEKILTKIKSTFQYLKDKKALSVDLFDNLIKFTKNRIEEAVTQNYSCITSLD PGGLLLLGTYLDLLRLRVGDAEQDSRDNFGGGVVQDACVLSIGTDENVLRITDGSSNQ DALFSWLSRPSRQDPFTSWDNMRQACLDKGTHALGKLNGRAAALIEKVNLKRGLTATQ TYEAYFGEKAKIDIEIMQLVAEVDNLKKNLLEVCTYDYREIILPAMKDFLWAKLCNVP PKGVSSSEGDKVSEASIENRDPVQEDINAGLNIISPESVLQEDDGKATEDNLQGGDST VPDCNGVEELPGDSKVLQSGKKLELPPRANTSTLGSSETPMEKENKTSSPSDYSGSNE GSANISSNGVTGTAYPNSENELKSLFSALLSLWHLRPFTDKFMKKAPLYPHFGVSGKD RNCMLCYLFHSFNAFSDKSDSTATYRLSCLRPSFIKILEEANVSLKEETNLAVKYIEI VLNMVHTSETAKCISNNSKNILYKTTLFSSCPDHRCLSHELFGMHKNATESTYFLNVG ASELRNIEMNTFADVIKSVDKKFHCNTESNAHNHPPCYFTTAFGYPSENDSHLVSGLL VSIAAPLDINPVYEGLHSECKYTMVSAVFRAEGRDICLAREEEKWLVYDNSLREVKEF DSWEKVLEEYSRSSFCPQIIFFERIDPVSEAAGTEVTV</aaseq>

Gene Sequence

<dnaseqindica>263..1639#1742..1867#1952..2056#2158..2292#2431..2480#4120..4178#4452..4561#4644..4865#5574..5807#5911..6010#6332..6462#7467..7551#7637..7761#actgcgcctccgcatttctcgcctcgcccacccccacacgcaaccgaccgacccatccttaccacccaccccaccccacgctcccctcctccgcgggcttggcatttcaacaaacacctcgcgtgcacctccctcgccgccacctcctcgccgcgcgccgcctcccactcctcctcctcccggcctccgcgcgccaccggcctcggcagctccccgtgggacgcgggggaacaagacgagcccgagcaggagcaggagcaacatggactgggacagcgccacccccggcttccgcgcgcgggtgaaggacctcaccgggccactcccggccgagcgggaaggggttgacgtcaaggaggagaggctccatgaagcggtggagctcgccgtcgacttccactcggcgctcgcgtaccacgtcgtgggatacgtgcgcgccgcgctcggggaggacgagttggcgctcgattcccttcgcctcgccagggatctcgcccccagcgacctcggcatcgccttcaccctcgccaagaggtacgccgctagggagcagtttgatctggcggtggaagcgtgccaacgcgcgctcggccgaggtgacgctgatctcgtcgacccgcagctaaacgccgtcttcgagtcccgccacttggagccgagcaaagaggcgcggatctccactgctaagaatggcctcaagcaactccttatctccgccttgtcgaagatcgccatcccgatggcccgagatcgttggaacggcatgagcgaggagacgcgccgcagtttcctgacagtgggtattgacgagatggtagcatactgctgtgctaagccgtctgacgagtgtcagatgagtgctctcactggtgcactggactttgtgaaggacaatagagaatggatctgctggctgtgccctcaatgcgaaatgactttcctcactgcgaagaccttccagttgcatgttgaggatgatgagttctcccggtcccaggagttcaaagaatcgctgttgtttgtgccggagaggatatctgatgaacagacagagtttattaagtgttggactctgccatctgatgtcaatcctactgaagaagctgagggagaaaagatcttgaccaagatcaagagtacatttcagtacctcaaggataagaaggctctatctgttgatctttttgacaacctgatcaaattcacgaaaaaccggattgaagaagctgttacccaaaattatagctgcattacttctctggaccctggagggcttctgttgctggggacttatctggatttgcttcgattgagggttggtgatgccgagcaggatagccgtgataattttggtgggggagttgttcaagacgcttgcgttctatctataggtactgatgagaatgtgctaagaattactgatggttctagcaatcaagatgctctgtttagctggctatctagaccttcaagacaagacccatttacatcatgggacaacatgaggcaagcctgtctagataagggaactcatgcccttggaaagttgaatggaagggccgctgcattgatagagaaagttaatctgaaacgtggcttaacagcgacgcagacttatgaagcttattttggtgaaaaggttccttttactatatcctgaatttctgtttgctcaatatcctttcagatagtgtttggaccttcctgaccaatcttttaagcttggctgtaaaatgtgcaggctaaaatagatattgagatcatgcaattggttgccgaagttgataatttgaagaaaaacctcttggaagtctgcacttatgattatcgtgaaatcattttaccagctatgaaagatttcctatgggttagtctagttcttgtatgttatttgactttgataaataatactactttgcttatcattgttttcatggttgcactcatgcaggctaaactgtgtaatgttccacctaaaggggtctcaagttctgagggtgataaagtttctgaggcaagtattgaaaacagagatccagttcaagaagatattaatgtaagttgtaacacgaacatgatgttctttctttactctgaagatatatcagctttgattagtttcacttaatcatctttgcatgattgtatgcttaacaggcaggtctcaatatcatcagtcctgaatcagtcttacaagaagatgatggaaaagctaccgaggacaatctacagggtggagattcaactgtgcccgactgtaatggtgtcgaagagcttccaggcgatagtaaagtaattaacggttcaatattttcttacttaaaaaaataacagtatcatcgtgctttagcttctcattcactgcatgcactggcttagtttcatttcatgctttacagtactgaacaaagaaaaatgttctgattttaggtactgcaatctggcaagaagcttgagttgcctccaagagctaacacaaggtaagcatgcttatgttgggtgtagcttgcttccttgaaattgttatttgctggatttcgctcttgttttagactatagctttctggacttgttccactatattatgttcccattttcctatttaatgtattttctgtaaagtttattgagctttctgttatgcttttgacccagtgagtatatctcatatcaccatgatatatatatccaatgatgtatatatccatgtctaagggttatctcaatatttttttctgaaagaaaatcggtagttctgccttatcaattaagggggagaaagatagggacgactacagagttcagtttacaagttttgcaaagaagaaaaccaactaatactaactgttaacaaactaccctaattaaaaggaacggatgagaaggttctctggcacaaatctgtttgacaccagctgttacaaactaccctaattaaaaggaacggataagaaggttctctggctcaatctgttcgacagtattgctatatatatcgagtctaggtcctgcttgacaaactttgcatcttttggatcgctatatacaaaaaacttagggccttcaggagttcttctgcgcagtctctcctttgcacgggagaagattcgaacgtgggggagtccagcatagatagggaacctatcttgatttccagacagcaagaatcgtgagtaaatcccatatgtaccatgtgcagctgcctgcatggatctggttatacctaaagggaaggagtccgatggaaagggcatcgctgcacctagcaaatttatcttggtcatttgtatatcaattacttgctgatgattgaatccgactggaatacgtataattaatggggctgttcatccaaacagtacattgatgggctacattgagtaaataatgaattcagtcagttttcctactttgagtctgggtcgcccaagtagaggcatggtacaactcaaaagggctcaatacttctatactatataataggtactcttaggtgcgtaggagcatatgctttgtagtatttgacagattacagcccaaatttcaaaattatatttgagagggatttgcttggattctgaatgttttttcaaaacagacttacaagttcttggccaaaacttgtggagagtaacctaattttacaattgcaaccgtaatttgtgcttgaatccaggtgtttttgcttactggtttttcattctgatggtttggttggatgatataggagcaagtggcatcgttgtttgtttaatgtgtttgtaaaatttgcatcattagttatcttattccgatggtttaggtaaatttagattcccctgaataagtgctagggattaaaatatgatccagaagggtattccgagtgtaacttttcggcatcaacaatattttactagagaaaatttgaatgccctccctgtctccctctggaatatttagtgcaccaaatgtccacactgttagattaatttcttcatattcatgaacctgcatggggagccatgtgttattttttttaaatgtgaaacaggagggaagcgcctatcatctgtttgcatattcctggtccttcattaacacaggacatgttactaactgcatgtatgtttggcacagcaccttgggaagctcagagactcctatggaaaaggaaaacaagacttcctcaccatctggtatatgtttattatattttttctatatcttatgtcatccagaataccatggtaaccacatgtggttgtaggcttgtacccattgtatttcagtatttcacatccactgtggactatacaaaataaaatgatgtgctttacctgatggactgtcatgaaattctagcgaccactatctaatgcatcgctattcataagaaacttcctgccattctctcaccagtcaccagtgaaaacactcatttgttctggctgggaaaatcttgtaagcagattactctggctcaaatgaagggagtgcaaacatttcgagcaatggagtaactggaactgcctatccaaatagtgaaaatgaactaaagtccttgttttcggctctcctggtaactcctttgtgactctccagattctcttatttacctattattttatgatgtttctcatagcctccaaacacccatgcagtcattgtggcacttaaggcccttcactgataagttcatgaagaaagcaccgctttatcctcattttggagtttctggaaaagatcggaattgtatgctgtgctacttgttccatagtttcaatgcttttagtgataagagtgactctacagcaacttatcgactgagctgtttgagaccttcttttatcaagattttagaagaggcgaatgtttcgttgaaggtttgtccttcagcctcttgtgcctttttttctgacctttttttttcttgctatctcctgaaaaagaatagatcaataacttttcaaatattattttcttcacttataactcactagaaagtataatcaagaaaaaacttaattataaaaaaactatatttgtttaaataaactattcctccatattgtcagcacagaaaatttggcttcactaatcagtaggaattatcatgatgcaaaatcttcattccagcatgaactggattggttttaggcactacttattccccagctattgttactgtagttagagaaaaatagcaagaaaacatcccaaattccaactacctagcacattctagcagtcttcttttttgtcactgtggtttccagaacttgtatggcgttaacaatttttctccagaactagtacaacttaatagggaaaaacaaatcaactattaaaatgctctatagaccaaaggttcatgttaaactttttcccctctacctaaatgatcttacctgctataaattcaattcaagtccaaaacagcatcgctacttttgttcctgacctaattgctttgctacatcctaagtggataaactcttgcagaaagagcaattaaattacttctagaatgaggatcttagcataaatgtgcaatgtttcataatactaacaatattttattctggttgcaggaggaaacaaatttggcagtgaaatatatagaaatagtgcttaacatggtgcatacatcagaaactgctaaatgtatcagcaacaacagtaaaaacattctgtacaaaacaacactcttctccagttgtcctgatcatagatgcctctcgcatgaactttttgggatgcacaagaatgcaacagagagcacatattttctcaacgttggtgcaagtgaactgcggaatattgaggtgtgcttcagtgctttcttgtttccttgttggattagcttgttgtagataatgcgtttgtaaactttgtcatttattaaattgacttatgcttcctctctagatgaacacttttgccgatgtcataaaatctgtcgacaagaagtttcactgtaatactgagagtaatgctcacaatcatccgccatgttacttcacaactggtaatgttgcttgtttcaattaagactgaagtataatcatgtgactacatttacactatatagttgagaacgtactgatgggcagtggaaattaaatgcggccgctttggtcttttgcactaaccaaatcaaaccaactttactggtctgcaaatgacatccttcagtatagtcaatgcaacataaataactagagatttttgacaaatattattggaccgactaaacacaataaatcattatgtaattcatgttatgttcattttgtggtaatttacactaaaactaattttgttctctttgtatattgctttgtcacagcttttggctatccaagtgagaatgatagccatcttgtctctggattactggtcagcatagctgcccccttggacattaatcctgtttatgaaggcctgcactcagaatgcaagtatactatggtttctgcggtatgtgcagatcaaaacttttattctcggattcatatttttaaatcaatttgtccaatattatatggcaatggccccaggacctgttccaggtttaagtcaaatattagaaatttttctgtttacaaagagttttccgtttcaattttcttcctgattgaggttgatcatcaggtttgctaacaggtgagagcttgtgtgattgcatttagtgatgctttgttgagttccactagtgttatagtcttgggtatgcaaattggacgtgtctgtatactcttgcgagagggtaaaatggcatggcatttgttacatttgtacttatcagctgttgatgttcttgcaaccgtcccaaaagtgattttcctatagttttggtcataaaccattgatcttatgaacttagccatgacattgcaattcaaactagaaaaaacagggatttagctgcattgttttgttggcatcaaggtgaaacgcagaatttgatttagaaagcaatcaagcttagccaccttatccagtagaacggaatactagtacagggtattgggacatgaaaggtggagcttattctcaatcgaaactaagaagaagagggcacattttaacataggggacatgcaaacaatgtcaagagcaaatttgccgctccgctgtcacatgggtattatgcaattatttcttcattccggtttcttttgttatacacaacatattgtgtgaactgaatatttgattggaatagttccgttggttcccttgggtcaatgccattgtaggtaatataattaaaatttctccctcaggatattttgtccattttattcgtctcatcaccctgaaacttcttttctttcataatttcttcataacagtataccaccagcttgaccaattacctttttgtcatagttatgtttttcacctctgtaagtacatagttaaaatatactattacacaaatgatcaatgcttgacatacaatctactaacattatcaggtatttcgtgctgaggggcgagatatctgccttgctcgagaagaggagaagtggcttgtatatgataactcactcagggaagtcaaggcaagtttgactcgcatttatcctgcattttcttttggccttttgccagataaccccttttcatgacgagactttctccatgcaggaatttgattcatgggagaaagtgcttgaagaatacagtcgttccagtttctgtccacagataatcttcttcgagcgtatcgacccagtttcagaggccgcgggcacagaagtcacagtctagacaactgcttacagttctacctggaaaccgaatcagggggctatttttgatggctgagtaatcacctttttagttagaatacagatagcttgatgacgcaaagctgaattttctgtcatgtactgtcgatatggctttcgtctctatatgccttgtccttagctttacagttctactaccagatatcatacgcagcgcagggtagtaagtattccagttatgcactacttttaggatgatataccaggtatcttaattacttcgaaacagcttttcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0598800, RefSeq:Os11g0598800