BGIOSGA022378

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Revision as of 13:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022378| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022378, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA022378

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022378, complete gene.

LocusTag

OSJNBA0015I14.33

Ensembl Transcript ID

BGIOSGA022378-TA

Ensembl Protein ID

BGIOSGA022378-PA

Length

3563

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3922241..3925803

Sequence Coding Region

3922241..3924308,3924380..3924510,3924592..3924672,3925316..3925401,3925710..3925803

Genome Context

<gbrowseImage1> name=IndicaChromosome06:3922241..3925803 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:3922241..3925803 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAGTAGCCGAGATTCTGAAGAAGAAAGGCCTCAAAGGAAGGACAATGGCGAAGAAACTGAAAATGGGGAAGATGGTGGAAATGCTTTGAGCCTCAAGGATGTTGCCAATGAGCTTCTTGGTTGTGTTGTCCATAGTGAGGAAGAGGCATACAAACTGTATTGTGACTACGGACATAGAATTGGTTTTAGTGTCCGCAAGGGTAAACAGTCTTACTTCATTGGCACGAAGAATATTCGTACAAAAGATTACTACTGCTCAAAAGAAGGGCTTAAGTACGATGAGCCAGTTACAGAAGCAAATTTTAATCGACCAGACACAAGAACTAATTGCAAAGCAATGATCCGCTTTAGAGTTGATGAGAAAGGACGCTGGACAGTCATACGCTTTGTCCCAACGCATAATCACCAGTTGGCTAAACCTGGGGAAAGACACATGTTGAGATCTGCAAAGTCGCTTGCTGTTGGAAAATCAGGTGTCATAGATCCACAAGCATCTACGGAATCACATCCAATAAATGGTTTCTCTCATATGATAGGAAGTGATATTGTGGAGCCTCCTGGGTATACTATAAGGGATTGCTACAATCATGTGAGCATGCAGGGTATAACGATAATCGAGGCAGGAGACAGCCAAAGTCTTGTGAACTATTTCAAGCGTAGAACCAATGAGGAAGGTATGTTCTATTGGGATGTTCAAGTTGATCAAGAAGGTCGTATGACCAACTTTTTCTTCAGGGATGCCAAAAGTAGAAATGATTTTGACTGCTTTGGAGATGCTGTTATATTTGACACAACCTTCCGCACAAATAAATACAGCCTGGTATGTGCTCCTTTTGTTGGAGTTAACCACCATTGGCAGAATATTGTTTTTGGATGTGCATTCTTGTTAGATGAGTCCTCAGCTTCCTATGTTTGGTTATTTAAATCATTCCTCGAGTCAATGGGTGGCCGGTCTCCAAAATCAATTTTCACTGATCAGGATGACGCTATTACGCAGGCAGTTGAGCTGGTTTTTCCTAACACGCAGCACTGTTTTTCCTATTGGCATATTCTGAAAAATGCACAGTCTCATTTAGGCACGGTAAATACCTCTCAAACATTTCAAAATATGTTTATTAAGTGCATGCAAGGACCTAACTCAGAAACGGAGCTTGAGGAATCATGGGCCACAATGTTAAATGAATATAAGTTACAGGAGAATAGCTGGCTTAGCGACCTTTATAGGTCCCGCAATAAATGGTGCTCAGCATTTAATAAAGATACTTTCGATGGTGGGATCAATTCATCTCAGTGGGGGGAGGTCTCAAACAATACATTTACTGGAATATCTGATGAATCTACCCCTCTTACACGATTTGCCCTTTTACTAGAAAAGGTTTTCAAGGGTCTACGTAGAAATGAATCTGAAGAGGATTTTCGCTGTAGCCAAACTGCTCCAGTTCGTGCAATTAAACACAGTACAGTTCTGAAGCAGGCCGCAGAATCCTACACGCATAAGATATACAAATTATTTGAGGCAGAATTTCTGGATGGGTGCGGAGCAACTTCATGCCATGAAAGTTCTTGTGGTGGGAACTTGTTGAGGTTTGAAATTACTATGCAGGGGAGGGGATCAAAAGTGTGGACCGTTCTTCTTGATACCTCCACGATGGAAATCTCTTGTGGTTGCAGAAAGTTTGAAAGGATGGGTCTTCTTTGTTCACATGCTCTGAAAGCCTTCAGCCTGCAAAATATGGACACAATTCCTGAGAAGTACATTTCGAAACGATGGACAAAAGATGCCAGGAGAAGCATGTATAAGCTTAGTCAAGATGATTCAACACAACAGGAATGCACTGAGGCTGAACTTGCATATCGCAACCGGGCAACGCAGTATGCATGTAGCCTTATAGCGAAGAGCCAGGAACTGGATGAATCAAGAAAGATATTCTGGGACACCCTTGAAACAGGAGAAAAAGCACTTGATGTATTCTTTGAAATTAGAAGTTTGCGTAGTCAAGCTGCAAAAGATGTCAGTAAAAGGGACAAAAAGAAGAAAAAATCATCTAAAGGACCAAGCACAAAAAAAGCAAAACCAACCCCAGCAACTTCCTCTGCTGTACCTGAACTTCTTGCCCATACTAATGTGCACCAGTTTCAATCTGCACAAGATGCTCAGGGTAACACGACAATTGGTAGACCGTTGTACTATCAGGCTTTTTCATCTGCCCCAATTCAACCAAACCAGATCTACATGCATCCGAACATGCACACAATGCCTCTTTGTGCACCACAGGAATCTGCTAAGACGTCTTTTGGAAAATGCTGCTTGGACATGGATGCAGCCAACCACCTGGATGGATTTTGTCAACCTTCCCGGAGTTGTCAAGAGCAGATAGCATCCCTTCTCGAAGGAGTTGAGCTGCAGAACAATGTGAAAAGGAAGCTGAAATGGAAGCTCATGCAGATTCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MDSSRDSEEERPQRKDNGEETENGEDGGNALSLKDVANELLGCVVHSEEEAYKLYCDYGHRIGFSVRKGKQSYFIGTKNIRTKDYYCSKEGLKYDEPVTEANFNRPDTRTNCKAMIRFRVDEKGRWTVIRFVPTHNHQLAKPGERHMLRSAKSLAVGKSGVIDPQASTESHPINGFSHMIGSDIVEPPGYTIRDCYNHVSMQGITIIEAGDSQSLVNYFKRRTNEEGMFYWDVQVDQEGRMTNFFFRDAKSRNDFDCFGDAVIFDTTFRTNKYSLVCAPFVGVNHHWQNIVFGCAFLLDESSASYVWLFKSFLESMGGRSPKSIFTDQDDAITQAVELVFPNTQHCFSYWHILKNAQSHLGTVNTSQTFQNMFIKCMQGPNSETELEESWATMLNEYKLQENSWLSDLYRSRNKWCSAFNKDTFDGGINSSQWGEVSNNTFTGISDESTPLTRFALLLEKVFKGLRRNESEEDFRCSQTAPVRAIKHSTVLKQAAESYTHKIYKLFEAEFLDGCGATSCHESSCGGNLLRFEITMQGRGSKVWTVLLDTSTMEISCGCRKFERMGLLCSHALKAFSLQNMDTIPEKYISKRWTKDARRSMYKLSQDDSTQQECTEAELAYRNRATQYACSLIAKSQELDESRKIFWDTLETGEKALDVFFEIRSLRSQAAKDVSKRDKKKKKSSKGPSTKKAKPTPATSSAVPELLAHTNVHQFQSAQDAQGNTTIGRPLYYQAFSSAPIQPNQIYMHPNMHTMPLCAPQESAKTSFGKCCLDMDAANHLDGFCQPSRSCQEQIASLLEGVELQNNVKRKLKWKLMQIQ</aaseq>

Gene Sequence

<dnaseqindica>1..2068#2140..2270#2352..2432#3076..3161#3470..3563#ATGGACAGTAGCCGAGATTCTGAAGAAGAAAGGCCTCAAAGGAAGGACAATGGCGAAGAAACTGAAAATGGGGAAGATGGTGGAAATGCTTTGAGCCTCAAGGATGTTGCCAATGAGCTTCTTGGTTGTGTTGTCCATAGTGAGGAAGAGGCATACAAACTGTATTGTGACTACGGACATAGAATTGGTTTTAGTGTCCGCAAGGGTAAACAGTCTTACTTCATTGGCACGAAGAATATTCGTACAAAAGATTACTACTGCTCAAAAGAAGGGCTTAAGTACGATGAGCCAGTTACAGAAGCAAATTTTAATCGACCAGACACAAGAACTAATTGCAAAGCAATGATCCGCTTTAGAGTTGATGAGAAAGGACGCTGGACAGTCATACGCTTTGTCCCAACGCATAATCACCAGTTGGCTAAACCTGGGGAAAGACACATGTTGAGATCTGCAAAGTCGCTTGCTGTTGGAAAATCAGGTGTCATAGATCCACAAGCATCTACGGAATCACATCCAATAAATGGTTTCTCTCATATGATAGGAAGTGATATTGTGGAGCCTCCTGGGTATACTATAAGGGATTGCTACAATCATGTGAGCATGCAGGGTATAACGATAATCGAGGCAGGAGACAGCCAAAGTCTTGTGAACTATTTCAAGCGTAGAACCAATGAGGAAGGTATGTTCTATTGGGATGTTCAAGTTGATCAAGAAGGTCGTATGACCAACTTTTTCTTCAGGGATGCCAAAAGTAGAAATGATTTTGACTGCTTTGGAGATGCTGTTATATTTGACACAACCTTCCGCACAAATAAATACAGCCTGGTATGTGCTCCTTTTGTTGGAGTTAACCACCATTGGCAGAATATTGTTTTTGGATGTGCATTCTTGTTAGATGAGTCCTCAGCTTCCTATGTTTGGTTATTTAAATCATTCCTCGAGTCAATGGGTGGCCGGTCTCCAAAATCAATTTTCACTGATCAGGATGACGCTATTACGCAGGCAGTTGAGCTGGTTTTTCCTAACACGCAGCACTGTTTTTCCTATTGGCATATTCTGAAAAATGCACAGTCTCATTTAGGCACGGTAAATACCTCTCAAACATTTCAAAATATGTTTATTAAGTGCATGCAAGGACCTAACTCAGAAACGGAGCTTGAGGAATCATGGGCCACAATGTTAAATGAATATAAGTTACAGGAGAATAGCTGGCTTAGCGACCTTTATAGGTCCCGCAATAAATGGTGCTCAGCATTTAATAAAGATACTTTCGATGGTGGGATCAATTCATCTCAGTGGGGGGAGGTCTCAAACAATACATTTACTGGAATATCTGATGAATCTACCCCTCTTACACGATTTGCCCTTTTACTAGAAAAGGTTTTCAAGGGTCTACGTAGAAATGAATCTGAAGAGGATTTTCGCTGTAGCCAAACTGCTCCAGTTCGTGCAATTAAACACAGTACAGTTCTGAAGCAGGCCGCAGAATCCTACACGCATAAGATATACAAATTATTTGAGGCAGAATTTCTGGATGGGTGCGGAGCAACTTCATGCCATGAAAGTTCTTGTGGTGGGAACTTGTTGAGGTTTGAAATTACTATGCAGGGGAGGGGATCAAAAGTGTGGACCGTTCTTCTTGATACCTCCACGATGGAAATCTCTTGTGGTTGCAGAAAGTTTGAAAGGATGGGTCTTCTTTGTTCACATGCTCTGAAAGCCTTCAGCCTGCAAAATATGGACACAATTCCTGAGAAGTACATTTCGAAACGATGGACAAAAGATGCCAGGAGAAGCATGTATAAGCTTAGTCAAGATGATTCAACACAACAGGAATGCACTGAGGCTGAACTTGCATATCGCAACCGGGCAACGCAGTATGCATGTAGCCTTATAGCGAAGAGCCAGGAACTGGATGAATCAAGAAAGATATTCTGGGACACCCTTGAAACAGGAGAAAAAGCACTTGATGTATTCTTTGAAATTAGAAGTTTGCGTAGTCAAGCTGCAAAAGATGTCAGTAAAAGGGACAAAAAGAAGAAAAAATCATCTAAAGGACCAAGCACAAGTGAGTAGCAAATTTATTCCTTCATGCTTGTAAAACACAATTTTGTTAAAAAATATACCCTCTCCGTGCAGAAAAAGCAAAACCAACCCCAGCAACTTCCTCTGCTGTACCTGAACTTCTTGCCCATACTAATGTGCACCAGTTTCAATCTGCACAAGATGCTCAGGGTAACACGACAATTGGTAGACCGTTGTACTATCAGGTACACATATGTTACTGGGAGTTTTTGTTTCCTTCTGGCATATAAAACTGATCTTACACCAGCATGCTTCATGTTTTGCAGGCTTTTTCATCTGCCCCAATTCAACCAAACCAGATCTACATGCATCCGAACATGCACACAATGCCTCTTTGTGCACCACAGGTATTACGGTCAGCAGACTGACCTAAAAAACTTTGCTTATCTGTTATTTGAGCTGCTCATTGTCGATATTGCTACATGCCATTCTGGGATTAAAGCAAATATTTTTTTGTCAATGTTGTTAAGCGAAATAACTGGACTGTGAACTGTTCAAATATGTACCATGGCTTACGATGGTACTTCACCATCCTTGTGTTGACTGAAATAGTTCCAAGAAGAAAATTTTTCGAGGGGAGTTCCAAGAATAAAATGAATCTGACCCATCAAACATTCATCTATGGGTGTGCTTATTGCTATTCATTTACACATGACCAGCAGGATTTCTCGGCATATTCTGCAATGCGTCCCAATTCGAATTTTGGTGGTGCAAAGAATGTCTGAAGGACAGTAAGGTATATGATTCCTAGTTTTTTAATCCACGGAACCATATGAAACTACCTCCATTTACATATTGCTTTTGCTGCCACTGTTGTCAAGAGGATTTTACTCTGCATATCTAGGATCAGAAATGAATCTCCCTGGCATTTTCTCAACTATTTTGAGCATCTTTGCTATGAATATTTATGGGGTTCAAATTCAGCTCATTGGAGGAACCAACCTGTGCTGCACTTCAAGCCTTACATGCTATATCACTCATGATTTCCAGGAATCTGCTAAGACGTCTTTTGGAAAATGCTGCTTGGACATGGATGCAGCCAACCACCTGGATGGATTTTGTCAACCTTCCCGGAGGTGTGATGTTGCTTTTGGATGTTAATTTCTGGCTCGCAACTGTTGATGTGTGTAACTATTCTGGTCTTTGACGTTTCTGTTCTGTTGAAGTGGAGTTCTAGTAATGTCAATTAGGTGACTGTAGGCTTGTAAGTTATAATTGGAGTGTAGATGCTGGATGAATAGAGGCCAGGAACATGTTGCTTCCATTGTCTTAAGGAAAAGGTTGTAACTGGGAGTAGTCACTAGCTATTTACAGGATCAGATTCTTTGGGCTAAAAGATGATCAGCTGGCGCCCTTGTTGCCTCTTGGCCCATGGTGCTACTAGTTGTCAAGAGCAGATAGCATCCCTTCTCGAAGGAGTTGAGCTGCAGAACAATGTGAAAAGGAAGCTGAAATGGAAGCTCATGCAGATTCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022378