BGIOSGA022396

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Revision as of 13:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022396| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022396, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA022396

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022396, complete gene.

LocusTag

OSJNBA0014B15.5

Ensembl Transcript ID

BGIOSGA022396-TA

Ensembl Protein ID

BGIOSGA022396-PA

Length

6101

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4238771..4244871

Sequence Coding Region

4238771..4238944,4240195..4240362,4240460..4240546,4241160..4241294,4241429..4241539
,4241777..4241868,4241951..4242056,4242138..4242224,4244458..4244871

Genome Context

<gbrowseImage1> name=IndicaChromosome06:4238771..4244871 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:4238771..4244871 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCCGTGCGGGACGGAGCGGCGGTGGCGGGGTACATGGCGGAGGATGACCCTGACGGGGCGGCTTCGGAAGACGGCGATATGGACGTGGAGGTGGGCGGCGAGGAGTCGCAGGCGCGCGACGGCGACAGGAGGGACGGCGGCGACGGCGACGACGAGTACGCGCTGCTCACTAGGATAACTGATACATCAGCAGCTGAAGCAAGAGCAGGAAAGGATATACAAGGTATACCATGGGAGAGGTTACAAATAACCAGGAGCGATTACAGAAAAGCTAGGTTGGTACAGTACAAAAACTACGAAAACTTCCCTCAATCAGGAGAGCTCATGGATAAGATATGCAAGCAAGTGGATAAGATCAGCAAGTATTATGAATTTCACTACAACACTAGATTAGTGAAGCCATCAATCCTCCACTTTCAGCTTAGGAATTTGTTATGGGCAACGTCGAAGCATGATGTCTACTTCATGTCAAATTCCACAGTAGGCCACTGGTCATCATTGTCTCACAATCTATCAGAGGTTCTTGATTTCTCCGGGCATGTTGCTCCTGCGCAGAAACACCCTGGCAGTTTACTGGAAGGGTTTAGCGGGGTTCAAGTTAGCACACTTTCAGTGAATGAGGGTTTATTGGTTGCTGGTGGTTTTCAGGGAGAACTAATTTGCAAGGTTGTGGGAGACCGTGATGTTAAGTTCTGCACAAGGACAACTTTAAGCGACAATGCTATCACAAATGCGATAGATATACACAGATCTGCAAGTGGAAGCTTGCGTGTTACCGTGTCCAACAATGATTGTGGTGTTCGTGAATTTGACATGGAAACATTTCAGCTCTTGAACCACTTCAGTTATAACTGGCCAGTAAATCACACATCTGTGAGCCCTGATAGGAAACTTCTGGCAGTAGTTGGAGATGATCGGGATGCTCTTCTTGTTGATTCAAGAAATGGAAAGGTAACCTCTACCCTAGTTGGCCATCTGGACTATTCGTTTGCTTCGGCATGGCACCCTGATGGCCGCACCTTCGCAACCGGTAACCAAGACAAGACCTGCCGCGTCTGGGACGTACGAAACCTGTCAACCTCCCTCTCAGTACTTAGGGGCAACATTGGCGCTATCCGTTGCATCCGCTACTCCTCAGATGGCCAGTTCATGCTCTTCTCGGAGCCCGCTGACTTCGTGCACGTCTACAGCGCCGCTGCGGACTACAAGAAGAGGCAGGAGATAGATTTCTTCGGCGAGATCTCCGGCATCTCGCTTAGCCCAGACGACGAGTCACTGTTCGTCGGAGTGTGCGACCGTGTGTACGCCAGCTTGCTGCACTACAGAATGGTCCACTCCTTTGGATACCTCGACTCGTTCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAVRDGAAVAGYMAEDDPDGAASEDGDMDVEVGGEESQARDGDRRDGGDGDDEYALLTRITDTSAAEARAGKDIQGIPWERLQITRSDYRKARLVQYKNYENFPQSGELMDKICKQVDKISKYYEFHYNTRLVKPSILHFQLRNLLWATSKHDVYFMSNSTVGHWSSLSHNLSEVLDFSGHVAPAQKHPGSLLEGFSGVQVSTLSVNEGLLVAGGFQGELICKVVGDRDVKFCTRTTLSDNAITNAIDIHRSASGSLRVTVSNNDCGVREFDMETFQLLNHFSYNWPVNHTSVSPDRKLLAVVGDDRDALLVDSRNGKVTSTLVGHLDYSFASAWHPDGRTFATGNQDKTCRVWDVRNLSTSLSVLRGNIGAIRCIRYSSDGQFMLFSEPADFVHVYSAAADYKKRQEIDFFGEISGISLSPDDESLFVGVCDRVYASLLHYRMVHSFGYLDSFM</aaseq>

Gene Sequence

<dnaseqindica>1..174#1425..1592#1690..1776#2390..2524#2659..2769#3007..3098#3181..3286#3368..3454#5688..6101#ATGGCGGCGGCCGTGCGGGACGGAGCGGCGGTGGCGGGGTACATGGCGGAGGATGACCCTGACGGGGCGGCTTCGGAAGACGGCGATATGGACGTGGAGGTGGGCGGCGAGGAGTCGCAGGCGCGCGACGGCGACAGGAGGGACGGCGGCGACGGCGACGACGAGTACGCGCTGGTCGGTAACGCCTTCCTTGCTGCTGGTGGTGGCTGCCTTGGTGGTTTTCGTGCCGCGAATCTGAGCCGCCGCCGTGTCACTGTTCTGGCTTGGTTCTCGTTTGATTTGTCTGAGGGTTCCATTCCTTCTTTTTTTTTTCATTTTTTTTAACCTTCGAGATTGGGTTACGTTTGGTGGGTAGCATGTCGCGATAAGCGTCGGAGCTTAGTATCTAGGGTTGTTCATGGACACAGGATAGCCTTCTGCTCCGAATCAGGTCCCTGCTGATCGCTATCATAGGTATACAGGGTTAGTTTTCTAATGTTTTGCAGTGCTGCTGCTAGGATGCATCGTGTGGAAAAGGACACATAGGAAATAAGTTAAAAAATTAAGCAGTTGATTGTTTTGTTATGACAAAGTAGAAAAGGCTAAGTTGGCATCTATAAACAGTTATTATATATGATAAGTGGGGAATTTACTTAGTCAAAAACACATCGATTGCACGGGGAGCCTTAGTGCAGTGATGTACTCTAAACAAGTGTATGTGTAATTAATTTTAGTTGATTAATAGGGCAGATCTGCATTTGGACAATTTTTCCCATTTAGTCCTTGGTTGCTGAATTCTTTTCGTTAACTAGAGACTTCATGTCAACGGTGTTTGTGGAGTAGATTTTTTCTGCCCAATCATGCAGCTCTAGATTGCTACCTAGGTTGTGCTTATCTTCAGCCAATAATGGCATGGCATACCATTCTCTCTGTTAGGTCGTTTTCATAAAAGGGGTATAGTGCATAGTTTTTCTATGCCCATCTTGGCCCGGCGTTGTGGATGCATTGTTTTTCAGTGCCTTTTGAATTGGCTAAGACCAATGAGTATCAAATATGGTTTTCTACCAGGAAATAGGACTCATGTCTTGTTCTTGTTGATCAAAGTTAGATCAGTTCACCTATTCAATTAATTGCCGACTCAGCTGGGCCCGTCTTTTGGCATATGTGATAACTGATAGTGCCCATGTGGGTCAACATGCCTATCTAATTGCCAGATCACAGGATGCTGGAGAATCGGATGCAACAGCTTGTCAAGGATAAAGATTATCTGTTTTGTTCAAACTTCTTGTGTTTTCCTTTGGTCTTTTCTGTACTGTGAAATCCGAACAGAAGCATGATGAGTTTGCTTCAATCTTTAGGATTATTCAGATGTGATTGTTCATTAAATGGTCTTGTGCATATGAAATAAAAATAGGTTGAAACAAAGTGTTTTTTTTTCTGTGCAGCTCACTAGGATAACTGATACATCAGCAGCTGAAGCAAGAGCAGGAAAGGATATACAAGGTATACCATGGGAGAGGTTACAAATAACCAGGAGCGATTACAGAAAAGCTAGGTTGGTACAGTACAAAAACTACGAAAACTTCCCTCAATCAGGAGAGCTCATGGATAAGGTCTCTATTATCATGAAATTTTATCTATCAATGTTTGTTTTTTTTGCTCTATGGATGTTCCAAATTCCTGAAAAAAAATGCATCTTACATTTTTCAGATATGCAAGCAAGTGGATAAGATCAGCAAGTATTATGAATTTCACTACAACACTAGATTAGTGAAGCCATCAATCCTCCACTTTCAGGTGAGTTGCATTCTTTCTTAGCTGACAAATACTCCTTTTTATCAATCCTCCACTAGATTAATGCGGGATAAGCTATTTTTCTTAGCTGTTAGCATTAGTTGTGTATCATCGGAGTTGTTACACCTCATTTACTTGTCTTACGTATGTGGCCATGTCAATAAGAACTACAAAGATAAAAAATGTTGTATGATCATTAGGGAAAGGGAACCTTTAACAAATTGTGAAATTGGCCTCTAAACAAGAAAACTACTGTTCCAGAGCATAGAATTAGTTCAATTGTTTTGCAGGATTCTGGTTCAGTTATGTTGGTAAAAAGGTTTTGGGATATTTCAAAGGGAATGCTGTAGTGGCTAAATACTTGGATGTTTTCATGGAACTGTTAAACACATGAAATCATGGCTTACACAATCTTGCCAGTGAAAAATTAAGTTTAAAGTTCTTCATACAAGCGAATTTTGAACTATGACTGGATATAATCAATGATGCAAACTTAAACACTTTTGCCTTGATGTCTTCATTATTATGAGGTCCATTCTTCTTTATAGCAGCTATTTGAATTTGTCTTGTCATATGAGTCCCAAGGCTGCTCAGTACTGACGAACTGCTTCTGTAGCTTAGGAATTTGTTATGGGCAACGTCGAAGCATGATGTCTACTTCATGTCAAATTCCACAGTAGGCCACTGGTCATCATTGTCTCACAATCTATCAGAGGTTCTTGATTTCTCCGGGCATGTTGCTCCTGCGCAGGTTTTCTTCTTTTTCATTTCCTGCTTGTGTTTATTTGAACTAAAGATCTTTTTTTTATTAGTGATGTTTCTCCCAAGTTCAATTACTCTTGTTTTTTTATGTAAAATTATTCTGAAATTAATGTTGTCACACAGAAACACCCTGGCAGTTTACTGGAAGGGTTTAGCGGGGTTCAAGTTAGCACACTTTCAGTGAATGAGGGTTTATTGGTTGCTGGTGGTTTTCAGGGAGAACTAATTTGCAAGGTAAGGTGCTGTTTCCCCTACTTTTGCTTTATAATAAGTACCTGCTTTAATGAAAAAAAAGCAAGCCATGAGTATCATCAGGCTTACATGCTCAGTATTTGCCAGTCTTGCTACAGGTTTGGGGATCCTTTACCTTTTCTTAATAAAAGAGGCAACCATGAATATTGTTTTTTTAAATAGAAAAGGCAAACCTTAAATATCAGGTTTACGTGCTCAATATTTTTTATCTTTGTACAGGTTGTGGGAGACCGTGATGTTAAGTTCTGCACAAGGACAACTTTAAGCGACAATGCTATCACAAATGCGATAGATATACACAGATCTGCAAGGTAAAAATATACCAGCTTAAATCTTTGGCTGAAGATGTACCTATCATTACAGAAATCTAAAGCCCTAAAATTGTCCATGTAGTGGAAGCTTGCGTGTTACCGTGTCCAACAATGATTGTGGTGTTCGTGAATTTGACATGGAAACATTTCAGCTCTTGAACCACTTCAGTTATAACTGGCCAGTAAATGTAAGTCATCTCTCTTCAATATCCACACAACGCTTTTATGTCCAGCCATCCTTGTTTGACTTCCTTACTACTCCTATGCAGCACACATCTGTGAGCCCTGATAGGAAACTTCTGGCAGTAGTTGGAGATGATCGGGATGCTCTTCTTGTTGATTCAAGAAATGGAAAGGTAAATGGCTAACATGTGCTCAGTCTCACATCGTCTGGCCTCAGTGGCGAAGCCACGGGGGGTGCCGGGGAGGGCCTGACACCTACGTTACCCTGATAGGCTGATACGGATACGCGATACGGCGATACCGGGATACACCGTCTTCTAAAAAACATGGATACGGGGATACGCGTGTATATATATATATATAATTAAAAATACAAAATAAATTAAGTGTGGAATATGGACTGAAAAATTAGGCAGCACAACAGCATCAAACCACCAATGCACCGATCATCATATATATGATATATATCTCAGTACGACATATTCACAGCATCTCACCATTCACTGAAGAGGCATGCATAAATAAGTGCAAGACTACACAGTAGATGAAATCATGAAAATAACATAGTTCTTCAAATAGATGGTAGACAACATTTTTCACATAGTAGATAAACCAATAGTAGAACATAACCACAGTGCTAAACTAATTAGAATTAACTTGTCCATGACTTCAAATTCAACTCAATAACTAGATAGCAAGACTAGATAAATTGATTGTTGATTTCATCCATTGGAACCGAAGTGGATGAAGGCCCATCACCTTATATGTCCAATGCACCAAGATCTAGCAGTCTCTCAGGGTCAGGCTCATCAAGTGACAGTTCTAGCAGTCTCGATGCATCAAAATCCATTGAATCTATCAAAGACGACAGCAATTGTACTAAGAAAAAGGGAACTGGAACACTATGCACGATGCAGATCAAACTTGGAGGGGATTTTCATTTACCTCAAGTCCTCAATGTCATCGGAGGCTGGGATCGAAGGAAGACAACGGCACTGGGCGCCGGTCGAAGCGGACAGCGGAGGACGGATCAGAGACGGCGGCAAGGCAACGCAGCGACGGTGTAGGCGGCGGCGCTGCGATGGGGATTGGGGTAGTGAGGAGAGAGGGGCAGTGTGAGTTGTGAGAGCGAGGGGCGGCGCGGGTGGAGGGGGAGAGAGATGCGGTTTTGTTCCTACGCGATTTAGGGCTCCCCCGTATCAGGTCCGCATCCCACCGTATCGGAAGAGTATCGGTGTTTATTTTAATTATCTGAAAAAGAGAAAAAAGAGGGATACGTACGGGATACCTATCCGGACGTATCTCACATGTATCCGCAGCCTGCCACCCCTCATCCTCTGATCGAAACCGCCCCCCCCCCTCCCCCCTCAATCTCTCTCTCGATAAATAATTAACAGATGCAGGAGTATATCAGTAGCTAGCAACTCACTAAGTCCGCATGCATATGTGTAGCTGAATGCATATGCATGGCTCTAGCTGGGAGCATCGATCAGCACTCACTAACTCCCGCATGCAGCTGGGCGAAGCTTTTGATGTGATGTGACCAATTAACAAGATGAAGTCTTCAAATTAAAGAAGTAATTGAGATGTTTTGTAGTGTATCAAATCTCAGTTCTAGTATAGACGAACTACATAAATTGTGTTTAAGTCTCTCTTGCATGATTCAACTATGCAATTCTTAGGGTACGTTCGATTCAGTTATTGGAAGTATATTTCTAGCGGCAGCGTATGATTAATTAGGTATTAATTATTAGAAACTTATAAAATAGATTAACAAACTTCTATTAAAAAACTTTTGCACAAACAATTTATTTAACCGTTTGGGTAGTAGCTAATGAAAAAGGAGAAGTTGCCCAAAACAACTCAGCCTTACTAAAGAGGTGGATGGATGGGGATAAACCGCCTAGACGCTCACACAAGGTCGATTCCGAGGCCACCATTTGTTGGGGGTGAAAACTGATCATGCATACAGTACATTGTTTACCAAGCAGCAATAAGCTTTCTTCTAGATACATTGACCTTATGGTTGGCCCCTCTAATATATAAATCCTGGCTTCGCCACTGTCTGGCCTAGTCTCAATTCTCAACCATTATTGTTAGATATTCATTGTAGATATTAATTATTCTCCCCCCGTTGAAAATTCAAAAAAAGATATTAATTATTCTGTTTTGTTTCGTTTTAACTTGGACAAACCCTGTCTCTCCATGCTTATTAGTGTAGCACATTGGACTGCTAGGGTCTTACCCTTTTCTTGACAAGTCACAGGCATTTTGCTTCCATGACCTATAACAAAATTATGCAGTATATGAACTTCTTCAAGAGAGATTGATTTTCTTTATTTGAGAATTGTACCGTACTGGTGTATATCTGGATAGTGACATTGAACGCTGAATCCTTCTCTTCAGGTAACCTCTACCCTAGTTGGCCATCTGGACTATTCGTTTGCTTCGGCATGGCACCCTGATGGCCGCACCTTCGCAACCGGTAACCAAGACAAGACCTGCCGCGTCTGGGACGTACGAAACCTGTCAACCTCCCTCTCAGTACTTAGGGGCAACATTGGCGCTATCCGTTGCATCCGCTACTCCTCAGATGGCCAGTTCATGCTCTTCTCGGAGCCCGCTGACTTCGTGCACGTCTACAGCGCCGCTGCGGACTACAAGAAGAGGCAGGAGATAGATTTCTTCGGCGAGATCTCCGGCATCTCGCTTAGCCCAGACGACGAGTCACTGTTCGTCGGAGTGTGCGACCGTGTGTACGCCAGCTTGCTGCACTACAGAATGGTCCACTCCTTTGGATACCTCGACTCGTTCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022396