BGIOSGA022400

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Revision as of 13:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022400| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022400, complete gene.| tag = OS06G01...")
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Gene Name

BGIOSGA022400

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022400, complete gene.

LocusTag

OS06G0173000

Ensembl Transcript ID

BGIOSGA022400-TA

Ensembl Protein ID

BGIOSGA022400-PA

Length

6179

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4306591..4312769

Sequence Coding Region

4306591..4306867,4308047..4308108,4308238..4308387,4308998..4309174,4309718..4309933
,4310024..4311702,4311824..4311889,4311975..4312044,4312131..4312769

Genome Context

<gbrowseImage1> name=IndicaChromosome06:4306591..4312769 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:4306591..4312769 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGCCGCCGGCGCCGCCGTCCGTGGAGCGGCAGGTGGCGGAGATAGCCGCCGAGCCCGACCGCGCCTCCGCGTACGCGCGTCTCCTCCACCTGCAGCGCGCGTGCGCCGATGACCCCTCCGCGGCCGCCGACCTCGCCGCAGCCTCCCCTTCCATCCTCCTCCCGCTCCTCCTACGCGACGCCGGTGACCGTGATGAGGCCGTCGCCGCCTCCGCGCTCAAGTGCCTTGGCTTCACGCTCTACCATCCGGTCCTCGTCTCCACCGTCTCAGGGCAGATGGCTCAGTCAGTATTAGATACCGTGATACAGCTAATCATGACCACTCAGATGAAGGCTATTTGTAATCTGGGTGTGTGGTGCATCTCTGTGCAAGAATTGGAGGCTGTCGTTGTAGATCATCGAGCAACTTCTTTGCTAACTGCTATTGTTCATGCCATTGACAATCCATTTTGTTCTTTGTCTACAACATTTGAGGCTGTTCAGGCTATCATGAAACTTACGAGTCAAAATCCAGAAAAAATGAGGGAACTATCAAGCATATGGGTTCCACCGATATACCGAAGACTCTTGAGTGTTGATAAGGCAGAAAGGGATATGGCAGAAAGGTGCCTGATTAAAGTGTCATCTGTTGTTTTACCACCACAATCTCTTCTATCGAAGGCAATAGCTTCAGACCTTGAGCATTCTCTGCTCTCTTGTATGTTGAATATGATCCATGATCCTGTAAAGAAAGTTCAAGCAGTGAAGTCATGGGGCTGGTACATATCCTTACTTGGCTTACATGTGGTGGATAATAGACATCTACTTAATAAAATCCTTAAGGTCCCTGAGCAGTTGTTCATTGATTCTGATACGCAAGTCCAGATTGCCACAATGGTTGCCTGGAGAAATTTGGTGAATGCATTTCTTCCTCAGGCTTCGGAGACTTTGGTTCCAAAAACTAAAATTTCTCCCATTGAATCCAGAGCAGATACAAATGCTCAGTTGAAAAAGATAAGGCTAATTATGATGCCTTTGGGTCGAATTCTGTCAAGAAGTCATAGTATTGCTTTAAGTTCTTCCTGCTTGAGCACATGGCATCACCTCTTATATAAACTTGGTGATTTGATAAATCAGCTACCTATTCTGGAGGCTGCTTTTGGGCCAGTACTCAAAATAGTTTTCTCCATTGGACCAGATATTCAGAATAAGCCGCTTTATTCATTTTGTGTCAATCTGTTTCATGAATATATTTCAACAAAAGTCCGAGACATGGCCTCACATGGAGAGTATTTGCCCATTCCACTGAATCAGAACTTGCTGTCCCAATCCTGTATACATCTCAAGACCTTGATGGATGGTCAGTGTATCAGATGGTTACCATGGGATGTTACTTGCTTTGATTTTCATTTGGACATCCTGGTCTGTATTGTAAATCCAGAACTACTTCGTAAGATGACTCTTGAAAGCGTGGTGACTGTTATGGATTCTGCTACGCATATTTTCAGATTGCTTGTTCAGGGAGTTCAAGTTGATTGTAAAGCAAAATGTGCTAATGGCAACGCTCAGATTTGCGTTGCTAAGGTGTGCAAGTTTGTGAAGAAGGTGTTTATGGATCTTGTAGGAAAGCAAAACAACAACAATTGTTCAGTGTTACTGCAATATGCTTTTCAGTTTGTGAAAGTTATTTTGGAGGAATTGGATCATTGCCTACTGGCTTCTGGAATCTGTGTGATAGGCTTAGACATCGAACACATAAAAGAGATGGAATATGCAGATTGCAGCCCAAAGTTATCATATCCAGGAATGAAGTCATATTCTTACATGGAAATGGTTTCTCCAGAAGTTTACATGATTGTCCTGTCTCTATCAATTGTAGCTGAGTTTACTGGAGAGCTCTCACATGGAGATGCTGAGCAATTGGCTATAATTATTTGCTTATCCAATTTCCAGGACAATTTTCATGCTGCTGTTTCTTTTATGTATAAGCAGATCATGCTTCTGACAGATAATAGGCTAAGAATGAGATGGTTGATGGTGTGGAACAAAATTGCGAAGCGCTTGAATGGGCAAATTACGCCAAACTTAAAAAAAATTATCTGCGGCGCAGGTGTCCATGATGTACTCTATCAGTTCTTCTGCTATCCATTTTTTGCTTTCCTATTGCCTGGGAGGAAATCTACTCTCTGTGGCTCTGAAAGTTCTTCTGAGTCATACCTTTCTTTGACACATGACCTAGAGGTGGAAGTGGCTATTGAGGTTTATAGATCCATTTGTGCAAACTCCAATCATGGTCCAGAGGCTGATCACAAGGTTTTCCTGGAGAGCTTTTGTGGATTTGTTGTAAGCATAATTGATGAAAACATCTCCCTGTTCCAAGCCAACATTGAGTACTGTTCAGAGAAGAAGTTTAAAAATTGTGCTATCCTTTCTACTCTTGGCGAACTAGTTAGCGGATTATTAGAGAATGGTCATATTTTGAACTACGCTATCAAAGAGCCAACAGAAGCAAGTGAAGAGTCTGCTGGATATAGCCAGCCTAGCATCCTTCTGTGTTGCTTGAGGCTTGTTAGCAGGTTTATGGGACTGTCAACTATTGTTATCAAAGCAAATCCAACTACCCAACACCAGATCATGAGCAGGGTTTTTTCATCTTTATCTGCGTTCGCTGGGTATCTTCTGTTGAAGAAAGATGTTCTTCTATTCTTTGAGATAATTGGAGAGCAACTAACTGAATGTCTCTCTTTATCTGGCACATTATACCGTGAAATGCAACATGGGGAAACCATTAATCAGATTGAGAAACTCTGGCTCAAGATCATCATGTGCCTAAAGATGAGCAAGCTCATCAATGATTGTTCCTTCCTTCAAAAGCAGCAAATGCTACTTCAAGCGGCAGTCAGTCACCCACATCGTCCCATTTCGGTTGCAACTACACCAGCCTGGAGAGCATCAAGATATGATATCTCAACCTTGCAGCACTCATCATTCTCCCTTTCTAAACTGGATAAATTGCCAATGGAGAGAAGAAAAGATCTTACTGACCCTTGCACTCCTCACAATGCCATCGCGCTCGAAGAAATCGACATTTTGAGGAAGTTCAAACACCCAATTTCTGAGTTGGAGAAGAATGATGAATCTATTAAGATCTCTGTGGGTCTAGGGAGAAAGAGGTTGAAGATCATGAAGTACTCAATGAAGCCAAGGGAACCTGGAAAAAGTACAGTTCCTCCTGGTAATTTTAGCTCTAAAAAGGATACTGATGCTGATGCCTTCTCATCGCATTACATGGAAAGCAAAGCGTGTAGGAAACCGGAATTAATACTTGAAATGCTTAAAAGAAAAAGATAG</cdnaseq>

Protein Sequence

<aaseq>MPPPPAPPSVERQVAEIAAEPDRASAYARLLHLQRACADDPSAAADLAAASPSILLPLLLRDAGDRDEAVAASALKCLGFTLYHPVLVSTVSGQMAQSVLDTVIQLIMTTQMKAICNLGVWCISVQELEAVVVDHRATSLLTAIVHAIDNPFCSLSTTFEAVQAIMKLTSQNPEKMRELSSIWVPPIYRRLLSVDKAERDMAERCLIKVSSVVLPPQSLLSKAIASDLEHSLLSCMLNMIHDPVKKVQAVKSWGWYISLLGLHVVDNRHLLNKILKVPEQLFIDSDTQVQIATMVAWRNLVNAFLPQASETLVPKTKISPIESRADTNAQLKKIRLIMMPLGRILSRSHSIALSSSCLSTWHHLLYKLGDLINQLPILEAAFGPVLKIVFSIGPDIQNKPLYSFCVNLFHEYISTKVRDMASHGEYLPIPLNQNLLSQSCIHLKTLMDGQCIRWLPWDVTCFDFHLDILVCIVNPELLRKMTLESVVTVMDSATHIFRLLVQGVQVDCKAKCANGNAQICVAKVCKFVKKVFMDLVGKQNNNNCSVLLQYAFQFVKVILEELDHCLLASGICVIGLDIEHIKEMEYADCSPKLSYPGMKSYSYMEMVSPEVYMIVLSLSIVAEFTGELSHGDAEQLAIIICLSNFQDNFHAAVSFMYKQIMLLTDNRLRMRWLMVWNKIAKRLNGQITPNLKKIICGAGVHDVLYQFFCYPFFAFLLPGRKSTLCGSESSSESYLSLTHDLEVEVAIEVYRSICANSNHGPEADHKVFLESFCGFVVSIIDENISLFQANIEYCSEKKFKNCAILSTLGELVSGLLENGHILNYAIKEPTEASEESAGYSQPSILLCCLRLVSRFMGLSTIVIKANPTTQHQIMSRVFSSLSAFAGYLLLKKDVLLFFEIIGEQLTECLSLSGTLYREMQHGETINQIEKLWLKIIMCLKMSKLINDCSFLQKQQMLLQAAVSHPHRPISVATTPAWRASRYDISTLQHSSFSLSKLDKLPMERRKDLTDPCTPHNAIALEEIDILRKFKHPISELEKNDESIKISVGLGRKRLKIMKYSMKPREPGKSTVPPGNFSSKKDTDADAFSSHYMESKACRKPELILEMLKRKR</aaseq>

Gene Sequence

<dnaseqindica>1..277#1457..1518#1648..1797#2408..2584#3128..3343#3434..5112#5234..5299#5385..5454#5541..6179#ATGCCGCCGCCGCCGGCGCCGCCGTCCGTGGAGCGGCAGGTGGCGGAGATAGCCGCCGAGCCCGACCGCGCCTCCGCGTACGCGCGTCTCCTCCACCTGCAGCGCGCGTGCGCCGATGACCCCTCCGCGGCCGCCGACCTCGCCGCAGCCTCCCCTTCCATCCTCCTCCCGCTCCTCCTACGCGACGCCGGTGACCGTGATGAGGCCGTCGCCGCCTCCGCGCTCAAGTGCCTTGGCTTCACGCTCTACCATCCGGTCCTCGTCTCCACCGTCTCAGGTAGAATGGCTCCCCTGTATCCACAACTCGTCAGTGAAATGTGCAGTTTCGGTTGAGCAGACTTGGGATTGTTGAGTAACTGTGATGTCACAAATTTGATTCAGCTTAGTTACTACTCCTACAGTACATTTGGATGTGGATTTTCATCCCTCAAGGCCTCGAGGGGACATCCCCTTGTTGTTTGCATGTCATCTAAATAGTTATCAACAAATTTTAAAAAAATTGACAAAATAGATTAATACGAAATATATCACTCCACAAACATGCAAGACCAAATTAAATTTCTACAAGTTATAACAAAAATAACAAACTAAACTGAAAATAGTGATCGCACATTCGCAACTATATGTGTTATTTTTGTTACAACTTGTAGAAGTTGAATTTAAACTTGCATGTTTGTGGAGTGATATATTTCATATTAATCTATGTTGCCAATTTTTTTCATATTTTTTTATGACTATTTAGGTGACATGCATGAAACGAGAGGATATCCCCTCGAGGGATGATTTCACTTTCCCCAGTACATTTGTGTAATCCGGTTAATGAAACGAAGCATAAAATGTTTTTTTATGTGTATGGAATAAAGGTCCCCTAAAATAGGCCTTAACCGTGTGATTTATTTCCGAAACTTACTCCTATGCATACACATTGAGATCCTGAGCTTGAACTTCACCAGCAGCCTGATTTGATATTTCTAGGCATTAACTTGTTTATTCTACTGAATGCCCTGTCCTGTTGATGGTTTAGGTTCTTTAATTTAAGATTGTTACATATAGTTTACTGTTGTTTACGCTAACCCTTGATGTTAAATTCTGACAATATATACATGACTATAGGTACATCCACCAATGGTACAGTTATAAGCTAGTGGACTGGCCCTTTATGGAAATTGTCAATTTTCATTTTTTTCCTGTTAGGTAATATTGTAAACGATGTTAGGATTAACAAGTTTCTTTTAATGTATATCGTGCTTTCTATAGTTGATGAAAGGAGTAACACATATTTTATTGTCGCTATTTTATTTGCCATTATCCCTTCCATTCTGTACCAGTCAATTGCCCCTCACAACTGAATAACTGATTCAATGTGCTTATACACATGATTGATAATGTTTATAGCTTTCTATCTTTGAACGGACAATTTTGATATTGTTTTTTTTTTGAAAAAAAAATCCTGCAGGGCAGATGGCTCAGTCAGTATTAGATACCGTGATACAGCTAATCATGACCACTCAGATGAAGGTTGTTCACACTTTCTATCCTTCTGTGTATAAATGTTTCTATTGTTCAATGTTAGCATGGAGAGTTTGATTATATTTTGGTAATCTAGTTCTTATTTTATCCTATTTAATTTACCAATTTGTACTGTAGGCTATTTGTAATCTGGGTGTGTGGTGCATCTCTGTGCAAGAATTGGAGGCTGTCGTTGTAGATCATCGAGCAACTTCTTTGCTAACTGCTATTGTTCATGCCATTGACAATCCATTTTGTTCTTTGTCTACAACATTTGAGGCTGTTCAGGTATTCTGCATACTCGAACTGATCCCTACTTCATTGCCTAGCTCTGGATGTGCAGTTATGCAATAAATTTATCTTCTGAGCATCTGATTCCTGTATAGTTGATTGTTTAGGAATTATCACATGCAAATAACAAACAAGTCATGTAAATAATTGCTTTGCATTGTAGTATGATGCCAATAAATGACCAGATAATCAACGGCATTCATAAGCTTTTTATTTTGTTTGGAGTTGACCTGAAACCCTGCAAAGATCTTATAAACTGAGACAGCTTTACAGATTTTCCACATGAATTAATGAGCGAGGCTACTAATTAATTGATTCCTTCTGTCTTTTTTATGTACATTTTTGGATGAATTTCATTCTACACCAACACATATAGCTCTTGCACTGGCATAGGCAATGCAAGGAAACAGTTGTGAGTTAGTAAAAAAACATTTTTTTATGCCATTGCTATTATGAGAATTGGACAATATAGGACAATTGGACAATCATTCTTAGGGGGAAATTCGAGCACCTTTATCCTGAGAGTCAAAACATGCTTCTTTTTTTCTTTTTCTGTGTTACCAGCTAATACCACTTAGAACTTACATTCCCTTTGATAACTGTGAAGGCTATCATGAAACTTACGAGTCAAAATCCAGAAAAAATGAGGGAACTATCAAGCATATGGGTTCCACCGATATACCGAAGACTCTTGAGTGTTGATAAGGCAGAAAGGGATATGGCAGAAAGGTGCCTGATTAAAGTGTCATCTGTTGTTTTACCACCACAATCTCTTCTATCGAAGGTAATTGAAATATTGCTCCTATTCTGAATGTCTAAGAGTTGCCTCTAATTGGTAGCATAATACTTTCATTGTTAAAGCCACATATTATTTTTTTAATGAAAAAACACTTAATAAATTAGGTATTGAAATATTTTATGTTGAGTTGTTGAAAACTTCGTGGACAAACAAAAAAAAATAACATTGGCCTATCTCCGTAGTATTTGTACTGAACTGAGCTGTAATTCTGAAATGCTATAGAATCTATGTACAAAGCAAACTAAAAGTTATTGGTAGATTAATTTGGCCAATGTGTATCTGGCAGACTGGCACGTGTCAATGGCACTTTCTTGTCACATATTTATGTGGCATTTGACATGTGAATCTTTATATTATTTTTGTGATTTAGAGATGTGCCATATTAATGCATCCTTTTGCAATTCTGATGCTGCATTACTTATTTACCAACCGCTTGTTGTATCATGTTACTTGCTAATGCAATCCCATTTCCAATCTACATGGTGTGACAGCTTCTGAACTTAATTTTCTTTGATGCTTGCTGTGTAGGCAATAGCTTCAGACCTTGAGCATTCTCTGCTCTCTTGTATGTTGAATATGATCCATGATCCTGTAAAGAAAGTTCAAGCAGTGAAGTCATGGGGCTGGTACATATCCTTACTTGGCTTACATGTGGTGGATAATAGACATCTACTTAATAAAATCCTTAAGGTCCCTGAGCAGTTGTTCATTGATTCTGATACGCAAGTCCAGATTGCCACAATGGTGAGCTAAACTGTTCATTTATCAAGTGAAATTGTTCTCCATTAAGAGAATCTATCCTGTCGTAATATGATAATACTTTCAGTTTTACAGGTTGCCTGGAGAAATTTGGTGAATGCATTTCTTCCTCAGGCTTCGGAGACTTTGGTTCCAAAAACTAAAATTTCTCCCATTGAATCCAGAGCAGATACAAATGCTCAGTTGAAAAAGATAAGGCTAATTATGATGCCTTTGGGTCGAATTCTGTCAAGAAGTCATAGTATTGCTTTAAGTTCTTCCTGCTTGAGCACATGGCATCACCTCTTATATAAACTTGGTGATTTGATAAATCAGCTACCTATTCTGGAGGCTGCTTTTGGGCCAGTACTCAAAATAGTTTTCTCCATTGGACCAGATATTCAGAATAAGCCGCTTTATTCATTTTGTGTCAATCTGTTTCATGAATATATTTCAACAAAAGTCCGAGACATGGCCTCACATGGAGAGTATTTGCCCATTCCACTGAATCAGAACTTGCTGTCCCAATCCTGTATACATCTCAAGACCTTGATGGATGGTCAGTGTATCAGATGGTTACCATGGGATGTTACTTGCTTTGATTTTCATTTGGACATCCTGGTCTGTATTGTAAATCCAGAACTACTTCGTAAGATGACTCTTGAAAGCGTGGTGACTGTTATGGATTCTGCTACGCATATTTTCAGATTGCTTGTTCAGGGAGTTCAAGTTGATTGTAAAGCAAAATGTGCTAATGGCAACGCTCAGATTTGCGTTGCTAAGGTGTGCAAGTTTGTGAAGAAGGTGTTTATGGATCTTGTAGGAAAGCAAAACAACAACAATTGTTCAGTGTTACTGCAATATGCTTTTCAGTTTGTGAAAGTTATTTTGGAGGAATTGGATCATTGCCTACTGGCTTCTGGAATCTGTGTGATAGGCTTAGACATCGAACACATAAAAGAGATGGAATATGCAGATTGCAGCCCAAAGTTATCATATCCAGGAATGAAGTCATATTCTTACATGGAAATGGTTTCTCCAGAAGTTTACATGATTGTCCTGTCTCTATCAATTGTAGCTGAGTTTACTGGAGAGCTCTCACATGGAGATGCTGAGCAATTGGCTATAATTATTTGCTTATCCAATTTCCAGGACAATTTTCATGCTGCTGTTTCTTTTATGTATAAGCAGATCATGCTTCTGACAGATAATAGGCTAAGAATGAGATGGTTGATGGTGTGGAACAAAATTGCGAAGCGCTTGAATGGGCAAATTACGCCAAACTTAAAAAAAATTATCTGCGGCGCAGGTGTCCATGATGTACTCTATCAGTTCTTCTGCTATCCATTTTTTGCTTTCCTATTGCCTGGGAGGAAATCTACTCTCTGTGGCTCTGAAAGTTCTTCTGAGTCATACCTTTCTTTGACACATGACCTAGAGGTGGAAGTGGCTATTGAGGTTTATAGATCCATTTGTGCAAACTCCAATCATGGTCCAGAGGCTGATCACAAGGTTTTCCTGGAGAGCTTTTGTGGATTTGTTGTAAGCATAATTGATGAAAACATCTCCCTGTTCCAAGCCAACATTGAGTACTGTTCAGAGAAGAAGTTTAAAAATTGTGCTATCCTTTCTACTCTTGGCGAACTAGTTAGCGGATTATTAGAGAATGGTCATATTTTGAACTACGCTATCAAAGAGCCAACAGAAGCAAGTGAAGAGTCTGCTGGATATAGCCAGCCTAGCATCCTTCTGTGTTGCTTGAGGCTTGTTAGCAGGTATGTTGAATTAAACTTACAGAGGAAATACTTTGTAATCTGTCCTGTCTGACATGAAAGGATAAATTTTGATGATTTCAGAATGTTTAAGTAATCCCCAACAAATTCATGGCAAATGCAGGTTTATGGGACTGTCAACTATTGTTATCAAAGCAAATCCAACTACCCAACACCAGATCATGAGCAGGTAAACATCTGGATTTAATCATTAGCAGGAATCTGCTTTAGTTTGGATTTTATATTATTCTTCTCTTACTTTGGTTATATGTCAGGGTTTTTTCATCTTTATCTGCGTTCGCTGGGTATCTTCTGTTGAAGAAAGATGTTCTTCTATTCTTTGAGGTTTGTGAAATCTTTGTACAAGTACAAGGCTCATGGCATCTTTCATGCTAGTTGCACTAACAAAACTTCAACTCATCCCCTTGCAGATAATTGGAGAGCAACTAACTGAATGTCTCTCTTTATCTGGCACATTATACCGTGAAATGCAACATGGGGAAACCATTAATCAGATTGAGAAACTCTGGCTCAAGATCATCATGTGCCTAAAGATGAGCAAGCTCATCAATGATTGTTCCTTCCTTCAAAAGCAGCAAATGCTACTTCAAGCGGCAGTCAGTCACCCACATCGTCCCATTTCGGTTGCAACTACACCAGCCTGGAGAGCATCAAGATATGATATCTCAACCTTGCAGCACTCATCATTCTCCCTTTCTAAACTGGATAAATTGCCAATGGAGAGAAGAAAAGATCTTACTGACCCTTGCACTCCTCACAATGCCATCGCGCTCGAAGAAATCGACATTTTGAGGAAGTTCAAACACCCAATTTCTGAGTTGGAGAAGAATGATGAATCTATTAAGATCTCTGTGGGTCTAGGGAGAAAGAGGTTGAAGATCATGAAGTACTCAATGAAGCCAAGGGAACCTGGAAAAAGTACAGTTCCTCCTGGTAATTTTAGCTCTAAAAAGGATACTGATGCTGATGCCTTCTCATCGCATTACATGGAAAGCAAAGCGTGTAGGAAACCGGAATTAATACTTGAAATGCTTAAAAGAAAAAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022400