BGIOSGA022416

From RiceWiki
Revision as of 13:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022416| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022416, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022416

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022416, complete gene.

LocusTag

OSJNBA0035I03.5

Ensembl Transcript ID

BGIOSGA022416-TA

Ensembl Protein ID

BGIOSGA022416-PA

Length

1485

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4503995..4505479

Sequence Coding Region

4503995..4504219,4504313..4504572,4504792..4505116,4505237..4505479

Genome Context

<gbrowseImage1> name=IndicaChromosome06:4503995..4505479 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:4503995..4505479 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGACGAGTCATGGAGGACGCCGGCGATAGTGCAAGAGCTGGCGGCGGCCGGCGTCGAGGAGCCACCGAGTCGGTACGTGCTTGGGGAGAAAGACCGTTCTGACGAGCTGGTCGCCGCCGAGCTGCCGGAGCCCATCCCCGTCGTTGATCTCAGCCGGCTAGCCGGCGCCGACGAGGCTGCCAAGCTCAGGGCGGCTCTGCAGAATTGGGGCTTCTTCCTGCTTACCAACCATGGAGTAGAAACCTCTCTGATGGATGATGTGTTGAACTTGGCAAGAGAGTTCTTCAACCAACCGATCGAACGGAAGCGAAAATTCAGCAACTTGATCGACGGCAAGAACTTCCAGGTGGAAGGGTATGGAACTGACCGGGTGGTAACCCAAGATCAGATCCTGGACTGGTCTGATCGGCTGTTTCTCAGAGTTGAACCCAAGGAGGAGCGAAATCTTGCCTTCTGGCCTGACCATCCTGAATCTTTCAGGGATGTTCTGAACGAGTACGCATCAAGAACCAAAAGAATAAGAGACGATATCGTTCAGGCTATGTCCAAGCTTCTTGGGCTTGATGAGGATTACTTCTTCGACCGACTCAACAAAGCTCCTGCACTTGCAAGATTCAACTACTACCCTCCCTGTCCAAGGCCTGACCTTGTGTTCGGCGTCAGGCCTCACTCCGACGGCTCCCTCTTGACGATTCTTCTCGTCGACGAAGATGTCGGTGGCCTGCAAATTCAGAGGGATGGCAAGTGGTACAATGTTCAGGTCACTCCCAACACGTTGCTGATCAACTTAGGTGACACCATGGAGGTATTGTGCAATGGCATCTTCAGGAGCCCAGTGCACAGGGTGGTGACAAACGCCGAGAGGGAGAGGATCTCACTGGCCATGTTTTACAGTGTGAATGATGAGAAAGATATTGGGCCGGCGGCTGGTTTGCTGGATGAGAATCGGCCTGCAAGATACAGGAAAGTGAGCGTCGGAGAGTTCAGGGCTGGGATCATTGGAAAATTCTCTCGACGAGAGAGATACATCGACTCCCTGAAGATCTGA</cdnaseq>

Protein Sequence

<aaseq>MADESWRTPAIVQELAAAGVEEPPSRYVLGEKDRSDELVAAELPEPIPVVDLSRLAGADEAAKLRAALQNWGFFLLTNHGVETSLMDDVLNLAREFFNQPIERKRKFSNLIDGKNFQVEGYGTDRVVTQDQILDWSDRLFLRVEPKEERNLAFWPDHPESFRDVLNEYASRTKRIRDDIVQAMSKLLGLDEDYFFDRLNKAPALARFNYYPPCPRPDLVFGVRPHSDGSLLTILLVDEDVGGLQIQRDGKWYNVQVTPNTLLINLGDTMEVLCNGIFRSPVHRVVTNAERERISLAMFYSVNDEKDIGPAAGLLDENRPARYRKVSVGEFRAGIIGKFSRRERYIDSLKI</aaseq>

Gene Sequence

<dnaseqindica>1..225#319..578#798..1122#1243..1485#ATGGCTGACGAGTCATGGAGGACGCCGGCGATAGTGCAAGAGCTGGCGGCGGCCGGCGTCGAGGAGCCACCGAGTCGGTACGTGCTTGGGGAGAAAGACCGTTCTGACGAGCTGGTCGCCGCCGAGCTGCCGGAGCCCATCCCCGTCGTTGATCTCAGCCGGCTAGCCGGCGCCGACGAGGCTGCCAAGCTCAGGGCGGCTCTGCAGAATTGGGGCTTCTTCCTGGTCAGCTACTAACGCAGTGATCCTACTTTGCTTAATAAAAAACTTGCTACTTTGTATCAATTTCTCCAATTTTCCTGGCTGTGTGTGATCCAGCTTACCAACCATGGAGTAGAAACCTCTCTGATGGATGATGTGTTGAACTTGGCAAGAGAGTTCTTCAACCAACCGATCGAACGGAAGCGAAAATTCAGCAACTTGATCGACGGCAAGAACTTCCAGGTGGAAGGGTATGGAACTGACCGGGTGGTAACCCAAGATCAGATCCTGGACTGGTCTGATCGGCTGTTTCTCAGAGTTGAACCCAAGGAGGAGCGAAATCTTGCCTTCTGGCCTGACCATCCTGAATCTTTCAGGTCACCTACTCACCTTACAGTGATCGATGTTTTACTTTCCAGTTTACACACGTCTGAATTTCTTCCTACTCTTTTTTTTTGGTGCAAAAGATGGTGTTTTTATTGTTCATGTATTACTAACAAAGTAACAAGAATTGTTGTCTTAATTCAGAAAGAATAACTTGACGATGTATCGAGAAATGGTTTTACTGAGCTATTAGAGAGCCTTTTCTTCTGCAGGGATGTTCTGAACGAGTACGCATCAAGAACCAAAAGAATAAGAGACGATATCGTTCAGGCTATGTCCAAGCTTCTTGGGCTTGATGAGGATTACTTCTTCGACCGACTCAACAAAGCTCCTGCACTTGCAAGATTCAACTACTACCCTCCCTGTCCAAGGCCTGACCTTGTGTTCGGCGTCAGGCCTCACTCCGACGGCTCCCTCTTGACGATTCTTCTCGTCGACGAAGATGTCGGTGGCCTGCAAATTCAGAGGGATGGCAAGTGGTACAATGTTCAGGTCACTCCCAACACGTTGCTGATCAACTTAGGTGACACCATGGAGGTAATTGGCATCTAGCATCCAAAACACTTTCTCTCTGAATCTGCAGAGACATTTGTAATATGATGATAAACCCAGGTTTCTGAATCCTGATGCATATTTGGATGCAAAATTTATGTGCAGGTATTGTGCAATGGCATCTTCAGGAGCCCAGTGCACAGGGTGGTGACAAACGCCGAGAGGGAGAGGATCTCACTGGCCATGTTTTACAGTGTGAATGATGAGAAAGATATTGGGCCGGCGGCTGGTTTGCTGGATGAGAATCGGCCTGCAAGATACAGGAAAGTGAGCGTCGGAGAGTTCAGGGCTGGGATCATTGGAAAATTCTCTCGACGAGAGAGATACATCGACTCCCTGAAGATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022416