BGIOSGA022424

From RiceWiki
Revision as of 13:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022424| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022424, complete gene.| tag = OS06G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022424

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022424, complete gene.

LocusTag

OS06G0181200

Ensembl Transcript ID

BGIOSGA022424-TA

Ensembl Protein ID

BGIOSGA022424-PA

Length

2479

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4616501..4618979

Sequence Coding Region

4616501..4616846,4616971..4617122,4617206..4617277,4617371..4617523,4617599..4617762
,4617840..4617987,4618380..4618502,4618624..4618711,4618801..4618979

Genome Context

<gbrowseImage1> name=IndicaChromosome06:4616501..4618979 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:4616501..4618979 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGAATCATGTGGTTTCCGCTCCCCCTAATGGCAACAGTCAAATTCCACTGCAGGCGACCGCTGGTATTGATAGTGTGGAAGCCACACGTGATCCAGCTTACACAGATTCTCTATTCTCAAATCAGGATCCTTGGAATGCAGTGGGAAATGCTTCTGTAGCGCCTCCAAGACTGAATAAGTTGGCTAAGGAGCCTGCTGTTTCTGGAGATCCATATGTGGAAGGCCATGGGCTTGCCATCAACAGTTCAAATGCTGCTACACTCTTAGAAGAAGGCAATCTTCCACTCATCCAGGACCGCACTTTTAAGGACATCTATCCTGAACCCTCTCAAATGAGCAAAGGATACGGAGAAGAAACTATTAAGCGACAGTTACAAGCTGTTGCTGAGGGTGTGGCAGCATCTGTCCTTCAGTCACCTTTCCCTGAAAAACCAACCGTATTCTCTGGTGATCACACAGATAAACAAGGAGCTGTAATTGATCCAAAATTGGAGGATGCGGTGAACAATCAATCAGACAAAACAAGCCAAGGAGTTAAAGTTTTAGATGATATTGATAATCTTCAGATAATAAAGAATAGTGATCTAGAAGAATTGCGGGAACTGGGTTCTGGAACCTTTGGTACTGTTTACCATGGAAAATGGAGAGGTTCCGATGTTGCTATAAAAAGGATCAATGATCGATGCTTTGCTGGGAAGGCATCTGAGCAAGAGCGGATGAGAACTGATTTCTGGAATGAAGCTGACAAGCTTGCATCATTGCACCATCCGAATGTTGTAGCTTTCTATGGTGTTGTACTGGATGGACCAGGTGGATCTGTTGCAACAGTAACTGAATACATGGCTAATGGTTCTCTTCGACAAGCATTGCAAAGACATGAAAAGATATTTGATCGGCGTAGGCGTCTCCTGATTGCAATGGATGTTGCGTTTGGTATGGAGTATTTGCATGAGAAGAACATTGTACACTTTGACCTAAAGAGTGATAATCTGCTTGTCAATCTAAGAGATCCTCAGCACCCTATATGCAAGGTTGGTGATTTGGGCTTGTCGAAAGTTAAATGCCAGACGCTAATATCTGGTGGGGTGCGAGGAACACTTCCTTGGATGGCCCCGGAGCTGTTGAATGGAAGCAGCAGCCTTGTTTCTGAAAAGGTCGATGTTTTCTCCTTCGGAATTGTAATGTGGGAGCTGCTCACTGGTGAAGAGCCTTATGCCGAATTGCATTATGGCGCCATCATAGGCGGGATTGTAAACAACACCCTGCGCCCTCCGGTGCCCGAGTCATGCGACCCTCGGTGGAGGTCACTGATGGAGCAATGCTGGTCGTCGGAACCGTCAGAAAGACCGAGCTTCACGGAGGTTGGCAAGAGGCTACGGGCCATGGCAACCCCCTCTACCAAGGCGCAACCTCAGAAATAA</cdnaseq>

Protein Sequence

<aaseq>MLNHVVSAPPNGNSQIPLQATAGIDSVEATRDPAYTDSLFSNQDPWNAVGNASVAPPRLNKLAKEPAVSGDPYVEGHGLAINSSNAATLLEEGNLPLIQDRTFKDIYPEPSQMSKGYGEETIKRQLQAVAEGVAASVLQSPFPEKPTVFSGDHTDKQGAVIDPKLEDAVNNQSDKTSQGVKVLDDIDNLQIIKNSDLEELRELGSGTFGTVYHGKWRGSDVAIKRINDRCFAGKASEQERMRTDFWNEADKLASLHHPNVVAFYGVVLDGPGGSVATVTEYMANGSLRQALQRHEKIFDRRRRLLIAMDVAFGMEYLHEKNIVHFDLKSDNLLVNLRDPQHPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYAELHYGAIIGGIVNNTLRPPVPESCDPRWRSLMEQCWSSEPSERPSFTEVGKRLRAMATPSTKAQPQK</aaseq>

Gene Sequence

<dnaseqindica>1..346#471..622#706..777#871..1023#1099..1262#1340..1487#1880..2002#2124..2211#2301..2479#ATGCTGAATCATGTGGTTTCCGCTCCCCCTAATGGCAACAGTCAAATTCCACTGCAGGCGACCGCTGGTATTGATAGTGTGGAAGCCACACGTGATCCAGCTTACACAGATTCTCTATTCTCAAATCAGGATCCTTGGAATGCAGTGGGAAATGCTTCTGTAGCGCCTCCAAGACTGAATAAGTTGGCTAAGGAGCCTGCTGTTTCTGGAGATCCATATGTGGAAGGCCATGGGCTTGCCATCAACAGTTCAAATGCTGCTACACTCTTAGAAGAAGGCAATCTTCCACTCATCCAGGACCGCACTTTTAAGGACATCTATCCTGAACCCTCTCAAATGAGCAAAGGTTTTATTCTCTTTTTCATCTTATATGATTTGGTCAGTTGTACTGTATTAACCATCTGATCATCTTAAAACTGAAACTGACTAAGCATGATTGTTTGCCCCCTTTTACTTTTGTCTTCAAAAAGGATACGGAGAAGAAACTATTAAGCGACAGTTACAAGCTGTTGCTGAGGGTGTGGCAGCATCTGTCCTTCAGTCACCTTTCCCTGAAAAACCAACCGTATTCTCTGGTGATCACACAGATAAACAAGGAGCTGTAATTGATCCAAAATTGGAGGTGGGCGGTGTTTATTTCTTTCCTTCCTGTTATAACTCTTTGTGGTTTGAGTGGTTACAAATTCCTTTCTTTGCTTTGTTCAGGATGCGGTGAACAATCAATCAGACAAAACAAGCCAAGGAGTTAAAGTTTTAGATGATATTGATAATCTTCAGGTTGGTGACAGCTGCAATCTAAAATTGTTTCATGTAAACTTTTGTTTGCAGGCAAATAGTTCACCCTTATTTTTTCACTACTGTTAATTCCAGATAATAAAGAATAGTGATCTAGAAGAATTGCGGGAACTGGGTTCTGGAACCTTTGGTACTGTTTACCATGGAAAATGGAGAGGTTCCGATGTTGCTATAAAAAGGATCAATGATCGATGCTTTGCTGGGAAGGCATCTGAGCAAGAGCGGATGGTCTGCACCTAACATACTGAATCTTTTTCATCTATTGTTAAGTTTGTCATGTTGTAAATTTGCCTGTGCTTGTAGAGAACTGATTTCTGGAATGAAGCTGACAAGCTTGCATCATTGCACCATCCGAATGTTGTAGCTTTCTATGGTGTTGTACTGGATGGACCAGGTGGATCTGTTGCAACAGTAACTGAATACATGGCTAATGGTTCTCTTCGACAAGCATTGCAAAGACATGAAAAGTATAGTAGCTGTTCAGTGCCATACTTATCACTTACCATGTTGTGATGCATATAATTCTATTTTCTTCTGCCTTCAGGATATTTGATCGGCGTAGGCGTCTCCTGATTGCAATGGATGTTGCGTTTGGTATGGAGTATTTGCATGAGAAGAACATTGTACACTTTGACCTAAAGAGTGATAATCTGCTTGTCAATCTAAGAGATCCTCAGCACCCTATATGCAAGGTGAAATCTCTTCGCTATTCGCATCACTTTTCTCTGCTTGTTTTGTAAGTGCTAAAAATTAATCAAATCAATCGTTATTCAAGTTATACTGTTATCATATGTTCTTGACAAAGAGAATAAGGTGTTTCCTTTATCAGAAAAAGAAAATGTGGTTTTATGTTACAGAAGCAATGTGTTGCTAAAGACAAAGAATCCCCAAGTGATTTGGATGTCTGAAACAAAGTTGTACTCTTAGGCACATCAGAGATGTCTTCTATTGCTGCATTTAGGGTGTAAATGAGTAGATATTTAGAGGACAGTTGGTTGTACTTATAGTGAAGACATTAAACATCTGCCTTGCGCGCAAGGCATGAATTGCTGCCATTTTGTAGTAACTGCTTCTCTTTTTGTAGGTTGGTGATTTGGGCTTGTCGAAAGTTAAATGCCAGACGCTAATATCTGGTGGGGTGCGAGGAACACTTCCTTGGATGGCCCCGGAGCTGTTGAATGGAAGCAGCAGCCTTGTTTCTGAAAAGGTTTGCCAGTGACCACACCCACATTCCTTGCGCCGCCACTTGACATGCGCTCTCTTTTCCAAAGTCACCTTTCATATGCTTTGCCTTTTTTTGACTGAAACTTCATATGCTTTTCTTGCAGGTCGATGTTTTCTCCTTCGGAATTGTAATGTGGGAGCTGCTCACTGGTGAAGAGCCTTATGCCGAATTGCATTATGGCGCCATCATAGGTACGCATGCTACTTCTTTACATAATCCACATCCCTTAATTAAATCCAATGCCATTCTTGTTGCTGAACTTTTCGCGTTCTACAACCAGGCGGGATTGTAAACAACACCCTGCGCCCTCCGGTGCCCGAGTCATGCGACCCTCGGTGGAGGTCACTGATGGAGCAATGCTGGTCGTCGGAACCGTCAGAAAGACCGAGCTTCACGGAGGTTGGCAAGAGGCTACGGGCCATGGCAACCCCCTCTACCAAGGCGCAACCTCAGAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022424