Os11g0600700

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Revision as of 09:15, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0600700| Description = Similar to RING domain protein| Version = NM_001074756.1 GI:115486160 GeneID:4350860| Length = 6538 bp| Definition ...")
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Gene Name

Os11g0600700

Description

Similar to RING domain protein

Version

NM_001074756.1 GI:115486160 GeneID:4350860

Length

6538 bp

Definition

Oryza sativa Japonica Group Os11g0600700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:24908518..24915055

Sequence Coding Region

24909271..24909516,24911441..24911512,24912304..24912368,24912493..24912625,24912972..24913052
,24913174..24913263,24914529..24914678

Expression

GEO Profiles:Os11g0600700

Genome Context

<gbrowseImage1> name=NC_008404:24908518..24915055 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:24908518..24915055 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgaccatgtggtggtgaatgtggaaggcttgggaaacgatggaggggctgtggagaagccatctgaggccgtgaacagctcagtggtggctgctgcgtcgctttctacgactgttgatacggtcgaggagggcggtggagaggaggagccgctcatccaggcggcggagtgccgtatatgccaggaggaggatagcatcaagaacctcgagaagccttgtgcttgcagtggcagcctcaagtatgctcatagagcttgtgtgcaacgctggtgcaatgagaaaggagacattacatgtgaaatctgtcatgagcaatataagcatggatacacagctccacctcgtgttgaaccagacgataccatcatagatatcggtggtgattgggcacgtgacccaagaattattgctgtagcggctgcacaacgtcgtcttcttgaaactgagtatgatgaatatgctggtactgatgctagtggtgctgcattctgccgttctgctgcacttatactaatggccttgttgctattgaggcatgctttgtctatctcagacaatgaaggagatgatgatgcttctaccatgttctcgctctttctacttcgagctgctggatttctgctgccatgctatatcatggcttggatattcagtattttgcatcgccggcgacaaagacaggaagcggctgcaattgctgcagcagaggtggcattcatcctgcaatcagcccaaggccatgcccttcagttcaccatcgctccagactcccccgccactccacagcatgagccacagcagcagcagccgcagccgcagccgcagcaatag</cdnaseq>

Protein Sequence

<aaseq>MGDHVVVNVEGLGNDGGAVEKPSEAVNSSVVAAASLSTTVDTVE EGGGEEEPLIQAAECRICQEEDSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCE ICHEQYKHGYTAPPRVEPDDTIIDIGGDWARDPRIIAVAAAQRRLLETEYDEYAGTDA SGAAFCRSAALILMALLLLRHALSISDNEGDDDASTMFSLFLLRAAGFLLPCYIMAWI FSILHRRRQRQEAAAIAAAEVAFILQSAQGHALQFTIAPDSPATPQHEPQQQQPQPQP QQ</aaseq>

Gene Sequence

<dnaseqindica>754..999#2924..2995#3787..3851#3976..4108#4455..4535#4657..4746#6012..6161#gaacgaaacacgccttcttccccaacgaccaaaccaaagtttgggtgaagaaaaaaaaatatcgccgcgtttttatcccccacgagacgagtcgagacgaccaaaagcctaactaatcgggggcaagacgaggaggagagcggattctcgtcggcttcggcgaccggaagaggagaggagaccgaccccgcgccgtgttccgccgccgccgccgccgccgacgacgacgacggcaagtaggtgcgtgcgatccccttccccttctctttgcgcggagcccgtcgccgagcggcgcggcggtggggagtccgttgatgtgtgtggtgccgcccgatttgggggtgatgtgatgtggtgtggtggctgctcttctacggtggaatcggggagagattcgcgttgttatggcgctgattcggtagggattgggtgggttgttcgtatgatccgcgctcagaaggggaattttgctgtggagagttgggggggggggggttggttgtagctagggtttcggtcggggacgggctctagtctctagagagttttagagtagtccaatacagtaaacggagtggtttttatttttcaggaattttcgctttactgcccgattcgaactatgcccatttttagccatcctcttgtgcgagtttaccccgtattgaccaatggcgttgtttgccttgttggtttcttgcaggaatttgattctcctggggaattaacttgttaggagaaaaggaatttgggatgggcgaccatgtggtggtgaatgtggaaggcttgggaaacgatggaggggctgtggagaagccatctgaggccgtgaacagctcagtggtggctgctgcgtcgctttctacgactgttgatacggtcgaggagggcggtggagaggaggagccgctcatccaggcggcggagtgccgtatatgccaggaggaggatagcatcaagaacctcgagaagccttgtgcttgcagtggcagcctcaaggtccagctcctcctcttttgatgttatttccatcttggatatggttcttatgttcctgaaattattgtaggcagcttgttgttcatgcagtgcatgtagttactggggctaagaataggctagttggggtagtgcttttcctagtttccattttggcttcattatggtttttcaattctattttcatgttggataagttgatggttttcttgcacataaattgatctaccatgttagataaagttgatttatcacattagattccctgataggttatactacctccatttcaggttataagactttctagtattgcctacattcatataaatgttaatgaatctaggcacacatatatgtctagattcattaacatatatatatatatatatatatatatatatatatatatatatatatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtagttgtttaattgccttgtatatgtatgttcaggatagtatcactgccatatcatatgatggggataaaattgttcacccctatggcagcatagtttactgggatgctatctatctacctgtagaggatgctaacctttaaacatgctgtgtacaaaaaaattggtttatccaataactatgcagtatcgggcatggcatgtatgtacctttaagcatgctcgtgtgactgtgtcctcactttctcctgaatctagctgcaaatggcaagttggattgttctcatatactttttaatgaagaaccaacctttgatctcatagggaagtgatgtggatatggatattgcatatcatctgtttgtcacaatcccttgtggagaacactttgcaaagacaagttgagtcagcactccgttaaacaaagcagctatgaattccattttacaatctttatgggataagacataccagtgttttgtgcaatggtttttgaagcaatagttgggtcaccacattgctactttatggtatgatgctaccttggacactaaatttcaacagcaatacagtgcatgggccggtcttacgtcatattaattgccaatggcaatacgtaatgcaaacccacactcaagcaagcaaccaccaatagtaaggctgtgttcgggaggtggaattccacctccccgcaagaaaaacatggtggtttattaatgtttaattaattaagtattagctaaaaataacttgaaaaatggattaatatgatttttaaagcaacttccgtatataatttttttgtaaaaaatgtaccgtttattagtttgaaaagcatgcacgtggaaaatgagagaggtgagttgggaaagtgaagaaaagaactcagcctaaatatattggttttgagtttgatccaacaacgaaaaatgcatttttatctcttaatattctattgggagcatatcaagggctactcaaaccatctgtccccaactatctccatgacttatcacagtaatactttattgatctcttctgtaccgtctgctggtactgttaagtcttgagttatgtcttgttatttcatttcattacatttcttccatatttctgatagaagctcatgagatgattaaagatccttaataatcttataatccattaacccagtccattttgtgtgaaaaactggatattaaataagcaaatttatgagattcgttactactttatctgctttgtttcttttagcttggaatttgcttttaagtcatagctattctttggatataatgtgtgtttgacatgaacttagaggctgcttctgtgtagtcaactaacttataatgtgtgttgtccttggcttgtataccatatgagaaagtacttgtatgttttatctatgtaattattttgtattctggaattgacaattttactttcttcatgtacagtatgctcatagagcttgtgtgcaacgctggtgcaatgagaaaggagacattacatgtgaaatctgtcatgaggtcagtaagatttcttctctactactccattactacgcattgctttctagttcttatctagaggctaagatagcacctattttgatatgtgtgcatccaaattgcagtatatttgtttcttcttaggacttcatttgtcaaatgttctgatctgaccttgacctgatgatttgacttgttctttctgcaatctcacgtcctcaccaatacaatattgctgttgcgatagctgaattcctctttaatgccatatgcacctttttcttgatgtgtgctgcttgctcttcttctttcacataggcctcactccatacaggatcatggcttttgtgtgacaaccttgaactcatttagtgttgtctatctgccattacaccgttaccatttgaagttgcttggggagcgagagctaaagcagctcatttttattttaatcaatattagttgatttgaagtaatctgagtgacggggacaggtcgtgataaattgggtagatttgagtttttccatgggtgcttagttgtggccttccaatttagtattagttcgatcttttcctttcctttcatgagcttaaaaccagcatttagttttaggagaatgtaggggagaccgggagagccctactatgctggtacattgcatgcttttgtgattgattaactgtttatgtttcaaatatgtttatactcgtagaatacctgtagcttctttcagtcttctgtagattttccaatgtgtttccgttcctgtgtattaatttcgttgaggcttgtattttcttctgcagcaatataagcatggatacacagctccacctcgtgttgaaccagacgataccatcatagatatcgggtaagttatttctgtacttattttgcttaaatttaccagtttgtccatttgattatattgtgttcaagtgcctttgaaatttgaaaatttagaacatttctaagtcaatactgttggcttgcagtggtgattgggcacgtgacccaagaattattgctgtagcggctgcacaacgtcgtcttcttgaaactgagtatgatgaatatgctggtactgatgctagtggtgctgcattctgccgttctgctgcacttatagtaagtactaaacaacaattcaaggtcctgttgtgcttaataagctaagctaattcatagattgctacttccagagtccagacaatttgtccagtcaccagtatagcctatcgccctatcgatctgttttataattgaagaaccatgcttagagataccttgcatttctctcatagttctgtttaatgaatggaagtataatatttttagttggtttacaaataggcaatcaagctagcctccttctctagtcaatcctttgtatgacttctctagccaaatggcttgtctcgaatttctggaattctcaagattgaacattctaaaatccttggtgcttttccagctaatggccttgttgctattgaggcatgctttgtctatctcagacaatgaaggagatgatgatgcttctaccatgttctcggttagtcttgtgttccttccccactttttttatcttattggttctttctgagctcaatgttgacttaaaaatctttttttacatgacttaaaatctattaatgttcttcaatgtccaacagctctttctacttcgagctgctggatttctgctgccatgctatatcatggcttggatattcagtattttgcatcgccggcgacaaagacaggtacttctaattctgtatggatctcattgattgtcaataaaatcattattgggctattcttatggaggaatgaaatgattggtggaccatctgatcctaactttgacacattaaccacttggttggtttaacgaatgggatgggttgttgtgtcactcttatcatgtttagcagaaaaacgaaaaatgacaccacctcaccagaatcacgtgatgatccctatccaacttgatgtagtattatggaatggaagttttaggccccgtttggtagggctccaaactccaaactccaactcctaactctaaactcccactccagtgagagctggctccagtgggagctccaaacactttttcactccagtgtttggctagtattcagctccagatctgaaaaaaaaatttaaaaaagaaaaaaacaaatgcccaaaccctaactgcccgtacgccgccggccaccggccgtgcgctgccgcgtgcgccgtccctgcgccgcgtccccccacgcgccatcggccgccgaccacctgccacgcgagccgtcgcccggcgctggccgcgcgccgccccgcgcacagtccctccatgagccgcctggcgctgcgtgcgccgtcgcccgtcgccggccgcctggcgctgcgtgtgccgtcgcccgtcgccggcagcgccatccgccacggccgcgcgcgctgcccccgtgcgtcgtccccccacgcgctgcccggcgccgcgcgcgctgtcgcccgccgctggccgcgcgccgccccgacgtgccgtcccccatgcccaccgccggtagcgccgtccgccgtggccgggcgccgtcacccgccgccggccgcacgctgttggccagccaccgccccgcgtgccgttcaccctgccatggcgactcgtgaggattacaggaaggggagagagaggtgagaggtggaggtgagattgggggtagttcagtggcatttctgtgtaaataagttaaaaaattaaagggtagtgggtcttttggggtggagtggagctgtggagcagcaaaaacccagctccacccccgtagttcattttgtaggagtagctctgctaactccgctcccaaaaatagaggatctagactgtttggcacagctcgactctaggtaagtttgttgggagctggagctgtgccaaacggggccttacttgccgtaattactctagtgggcattgcagtataactatcatcgatgcaacatctaaactctttcgtacttgtatttttggcaggaagcggctgcaattgctgcagcagaggtggcattcatcctgcaatcagcccaaggccatgcccttcagttcaccatcgctccagactcccccgccactccacagcatgagccacagcagcagcagccgcagccgcagccgcagcaatagctagttacttcagtagcgtctctcaactactgactcgcacatgcagaagaagaggatacctcagctagtggccgctttgttgtttcctgttgcaactggcccagggacgctaagaacctggcctcgccttgtgtggccgggtagaaaccttgtaaaacgccagagattcatttgttgcaagcgaccgcagcttaagccccgctacccttcgatttgtctctgtgtaactcaagcattgatttattgtaaatttgtcgtctgttggagtccatttttttagttcctttgccaagtgttttactgccatgtacagtattattacatgggagcttttatctttcaaagaattaatctgagtgagtgtgaaactgttaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0600700, RefSeq:Os11g0600700