BGIOSGA022426

From RiceWiki
Revision as of 13:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022426| Description = cDNA, clone: J090092I02, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA022426, complete gene.| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022426

Description

cDNA, clone: J090092I02, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA022426, complete gene.

LocusTag

OS06G0181400

Ensembl Transcript ID

BGIOSGA022426-TA

Ensembl Protein ID

BGIOSGA022426-PA

Length

2242

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4627150..4629391

Sequence Coding Region

4627150..4627362,4627467..4627575,4627715..4627841,4627969..4628020,4628056..4628149
,4628214..4628260,4628339..4628450,4628725..4628851,4628941..4629391

Genome Context

<gbrowseImage1> name=IndicaChromosome06:4627150..4629391 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:4627150..4629391 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGCCGCCGTCTTCCCTGCCTCCCCGCGTCCTCCCCAACCTTGTCTCATGCTCCAGGAGAGCCGTGACATCGGCTGCCACCGCAGCAGCCGCAGCCTACTCGACAGCCGCCGCCGCGGGGGGCGGCGGCGGCGGCGGCCGCCCTCTCCGCTACGCCGTCCTCGGCGCCGGGTTCGCGGGGCTCTCCGTCGCTTGGCACCTCCTCAAGTATAGCCCCAAGGGTTCCCGCGTGCGCGTCGACATCTACGACGAGAGCGGCATCGGCGGTGGCGCATCGGGCGTTTCCGGGGGGCTTCTCCACCCGTACTCACCTAAAGTGAAGCTTCTATGGAAGGGTGCTGAATTCTGGAAAGAGTGTATGGATCTGCTGCGTTGCGCGGAGCAAGCGAATGGAGCCGCTGGGGCAGATGGAGCTAGCCAAGATGAGACCCTTATCTGGAGAAGGGGAATTATACGGCCGCCTACAAGCGAGAAAACTGCTGACATATTGCTGGAGGTGCTTCCTTTTTTGTTTCTGGTGTACGATCTTGACTGCTTCGACCTATCCAAGTTAGAATGCTCAGAGTTCCCTCCAGAGTTGCAGCCTTCAATTTACATGCCATTAGCGCTGAACATCAACCCTAAGAAATATTTACAGGCTTTGTTCTTCGCATGCCAAAATATGTCTGATGAAGCATCATTATCATCCAGCGAACAGAAAGAGTGCAAGCTGTACAACGAACACGTCGATGATCTACAGCAATTGGCAGGTGATTATGATTCAGTAATTATCTGCCTTGGTGCTAGAGCTAGCTCACTTCCAGAACTCACAAATAAGCTACCTCTTAGAACATGCCGAGGAGTTATAGCTGAATTCCAGTTGCCATCAGATACAATAGAAACATATGGCAGTCAAAGTCCTTCAATCTTATCTGATGCTTGGCTGGCATTCCAAGGTCCTCGTACCGTTTCCATTGGGTCGACTTGGCAGTGGAAGTCAGAAAACTATTCTTCATCTGTATCTGATGATGAAGCTCTCAATGCAATGGAAGAGCTGCTCCCAAAAGCCTCTGCTGTTTATCCAGGAATAACTAAATGGAAATTTGTACAAGCAAGGGCTGGGATAAGAGCAATGCCTCCACTGACAGCCAACGGATCATTGCCGCTGTTGGGTTGTTTGAATGATGTGATAGGCAAGAGGAGCAACTGTAGTTTTTGGCTAGTTGGTGGCCTTGGTGCCAGGGGTCTTCTGTTCCATGGTTTGGCTGGAAAGCTTACTGCCAAGGCTGTAATTTCCTGCGACGAAAACCTAATACCTCCTGAATTCACTTGCTGGAAAGAACCTTAG</cdnaseq>

Protein Sequence

<aaseq>MPPPPSSLPPRVLPNLVSCSRRAVTSAATAAAAAYSTAAAAGGGGGGGRPLRYAVLGAGFAGLSVAWHLLKYSPKGSRVRVDIYDESGIGGGASGVSGGLLHPYSPKVKLLWKGAEFWKECMDLLRCAEQANGAAGADGASQDETLIWRRGIIRPPTSEKTADILLEVLPFLFLVYDLDCFDLSKLECSEFPPELQPSIYMPLALNINPKKYLQALFFACQNMSDEASLSSSEQKECKLYNEHVDDLQQLAGDYDSVIICLGARASSLPELTNKLPLRTCRGVIAEFQLPSDTIETYGSQSPSILSDAWLAFQGPRTVSIGSTWQWKSENYSSSVSDDEALNAMEELLPKASAVYPGITKWKFVQARAGIRAMPPLTANGSLPLLGCLNDVIGKRSNCSFWLVGGLGARGLLFHGLAGKLTAKAVISCDENLIPPEFTCWKEP</aaseq>

Gene Sequence

<dnaseqindica>1..213#318..426#566..692#820..871#907..1000#1065..1111#1190..1301#1576..1702#1792..2242#ATGCCGCCGCCGCCGTCTTCCCTGCCTCCCCGCGTCCTCCCCAACCTTGTCTCATGCTCCAGGAGAGCCGTGACATCGGCTGCCACCGCAGCAGCCGCAGCCTACTCGACAGCCGCCGCCGCGGGGGGCGGCGGCGGCGGCGGCCGCCCTCTCCGCTACGCCGTCCTCGGCGCCGGGTTCGCGGGGCTCTCCGTCGCTTGGCACCTCCTCAAGGTCCTCCTCCCTTCTCCTATCCTCATCCTCTGCTTCAGACGAGTTACCTGCCACTGGAATCACCTCCTGAGCCGACGCCTTCGAAAATTTCTGATTGATTCCAGTATAGCCCCAAGGGTTCCCGCGTGCGCGTCGACATCTACGACGAGAGCGGCATCGGCGGTGGCGCATCGGGCGTTTCCGGGGGGCTTCTCCACCCGTACTCACCTAAAGGTCTCCCATCTCCATCACCTGAAGCATTGCAAATTATGATTTCACCAACTTATTATGCAACTACCAGTTGAGCCATTTAGTTCCAGCTTATAATTAGTGTGAATGCGTGATGCGCAAATCGAATTCTCGTTAACCGCAGTGAAGCTTCTATGGAAGGGTGCTGAATTCTGGAAAGAGTGTATGGATCTGCTGCGTTGCGCGGAGCAAGCGAATGGAGCCGCTGGGGCAGATGGAGCTAGCCAAGATGAGACCCTTATCTGGAGAAGGCAATTCCTTGTTCTTTGTAGATAGACTTGTTATGGATTTACTTATTGCTTCTGTTTGGCATGTCTTTTGTGGGCTGCTGTATTTGTGTGTGCACATTATGAGAAGTGGTTTAACTGAACTGAGCAGGGGAATTATACGGCCGCCTACAAGCGAGAAAACTGCTGACATATTGCTGGAGGTACTGCTGAATTAAGATTGTGCTGATATGCTCAGGTGCTTCCTTTTTTGTTTCTGGTGTACGATCTTGACTGCTTCGACCTATCCAAGTTAGAATGCTCAGAGTTCCCTCCAGAGTTGCAGCCTTCAAGTTCTTGATTCAGACGAGGCACAGTGTCTGATCCCTGGGTTATGTGTTCCGTTGAACTTTGCAGTTTACATGCCATTAGCGCTGAACATCAACCCTAAGAAATATTTACAGGTGGTGTGCTCCTTCACGCTATCTCGTTGTCAATGATTTGTCATCTATTCTTGATACCCATTCTTGGGGGCTCTGCAGGCTTTGTTCTTCGCATGCCAAAATATGTCTGATGAAGCATCATTATCATCCAGCGAACAGAAAGAGTGCAAGCTGTACAACGAACACGTCGATGATCTACAGCAATTGGCAGGTAAATTCTCGCTCAATCACCTGATTGAGCAAGGACAAACATGGACCTTGTTATACCATGCTTTCAATTTTGGCTTTTCCATTAACATTAAACTGAAAGTGCACACAGTGTCTACTCCTGAAGCAAAAGCAAAGATTTGTTCTTGTCAATTTACAATTGTTAATTTCAGAGACCTCTGTTAAGAAAAATGTTAAAATGCAACACTTGTATGGTTCACTGAAGCTGCTTCAGTATGGACTTCTTCTAACCTAAAGATCCTATCAAACATCTGCAGGTGATTATGATTCAGTAATTATCTGCCTTGGTGCTAGAGCTAGCTCACTTCCAGAACTCACAAATAAGCTACCTCTTAGAACATGCCGAGGAGTTATAGCTGAATTCCAGTTGCCATCAGATACAATGTAAGGGAAATTCTTTGTGTTTAAGAATTGAACTTAAGTCATTACAGCATCAACTGGGATTATCTAATTGGTGTGTTTCATTCCTGCAGAGAAACATATGGCAGTCAAAGTCCTTCAATCTTATCTGATGCTTGGCTGGCATTCCAAGGTCCTCGTACCGTTTCCATTGGGTCGACTTGGCAGTGGAAGTCAGAAAACTATTCTTCATCTGTATCTGATGATGAAGCTCTCAATGCAATGGAAGAGCTGCTCCCAAAAGCCTCTGCTGTTTATCCAGGAATAACTAAATGGAAATTTGTACAAGCAAGGGCTGGGATAAGAGCAATGCCTCCACTGACAGCCAACGGATCATTGCCGCTGTTGGGTTGTTTGAATGATGTGATAGGCAAGAGGAGCAACTGTAGTTTTTGGCTAGTTGGTGGCCTTGGTGCCAGGGGTCTTCTGTTCCATGGTTTGGCTGGAAAGCTTACTGCCAAGGCTGTAATTTCCTGCGACGAAAACCTAATACCTCCTGAATTCACTTGCTGGAAAGAACCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022426