BGIOSGA022430

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Revision as of 13:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022430| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022430, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA022430

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022430, complete gene.

LocusTag

OSJNBB0036B04.15

Ensembl Transcript ID

BGIOSGA022430-TA

Ensembl Protein ID

BGIOSGA022430-PA

Length

4182

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4735467..4739648

Sequence Coding Region

4735467..4735620,4735913..4736065,4736201..4736614,4736738..4736814,4737999..4739219
,4739577..4739648

Genome Context

<gbrowseImage1> name=IndicaChromosome06:4735467..4739648 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:4735467..4739648 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTTCTGGGTGCTTTGAGGATGGAGGAGAGGAAGGGATTGATGGGGAGGGAGAGGGATCAATTCCCCGTCGGCATGCGGGTCCTCGCCGTCGACGATGACCCGGTGTGCCTCAAGGTTCTTGAGACCCTCCTCCGGCGCTGCCAATACCATGTAACATCAACCAACCAGGCTATTACTGCGTTGAAGCTGCTCAGGGAGAACAGGGACATGTTTGATCTTGTCATCAGTGATGTCCACATGCCCGACATGGACGGATTTAAGCTCCTTGAGCTTGTGGGGCTTGAAATGGATCTCCCAGTCATCATGTTATCAGTAAATGGAGAGACAAAGACTGTGATGAAGGGGATAACTCATGGTGCCTGTGACTATCTTCTAAAACCGGTCCGAATCGAAGAACTAAGGAACATATGGCAGCATGTTGTTAGGAGGAAGTTCGGTAATCGTGAGCGAAACAATCTTGATTTCTCCAAAGAATGCAATAAGCCGCAAAGCGCGGATACTGATCATGGACCATACCAACCTACCTGTGGTTCTTCTGATCAAAATGGGAGGTCCAGCAGGAAAAGGAAAGAACTACACGGCGAGGACGACGATGAAGGCGATGATAATGATTATCAAGAAAATGATGAGCCCTCAGCTGCAAAGAAGCCCAGAGTTGTATGGTCAGTTGAGCTGCACCGAAAATTTGTTGCCGCTGTCAACCAGCTTGGAATTGACAAAGCTGTACCAAAAAGAATTCTTGAGCTTATGAATGTGGAGAAACTCACCAGGGAAAATGTTGCAAGTCATCTACAGAAGTACAGGCTTTACCTCAAGAGACTAGGTGCTGTAGCATCACAACAAGCCAGCATTGTTGCTGCCTTTGGAGGCAGAGATCCCTCCTTCTTGCATATTGGAGCATTTGAAGGACTCCAGAGCTATCAACCTTTTGCACCTTCTGCTGCTCTTCCATCTTTCAATCCACATGGCCTGCTAACCCGAACTAGCGCCGCCGCGGCTTTCGGACTTCAGGAGCTTGCTGCCCCCTCCAGCACAATTCAGACTTCTACAGGAAATGTCACAGTTGGCCATTGCTTGGAAGAAAACCAGCAGGCAAATCTAGCACAAGGCTTGACCGCGGCGATCGGGCAACCTCAGCTTCAACAGAACTGGATTCATCAAGAAGGTAATGGTCTGTCTGATGTTTTTTCTGGGAGTTCTCTGACCAACACTTTGTCCAGCACACTCCAAAGAGTTCCAAGCAGTTCATTGCCACCACAAGAACTCTTGGAGTGCAAACAAGCCAAAGTTAGCATGCCGCCATCGATACGGATACCGCCTTCTAGTTCAGCACTTCTTGAGAGGACTCTTGGGGTTTCCACCAATTTGGGAGATTCTAGTATATCCCAGCAGGGTGCTCTTCCAATAGATGGTGGATTTTCTGCTGACAGGTTACCATTGCACAGTTCATTTGATGGCGCTGTTGCAACAAAGCTAGATACTAGTTTGGCAGCTTCACAGAGAGAGATTGGCCAGCAGGGGAAATTTTCAGTTAGCATGCTTGTCTCCCCTTCTGACAATCTTGCATTAGCCAAAAATGCCAAAACTGGAGCTAGTTCTTCTGGCAGTACTATAATTCTCCCTCTTGATACTGCAAGACATTCAGACTACTTGCAGTTCGGAGGTGCAAGCAATTCTTTGCAGAAAATGGATGGACAGAAACAAGATCATATACAGAGCTCAAACATTATATGGAGTTCAATGCCAAGCACTCAACTGCCAAGTGATACCCAAATTCATAATACTCAAAGCCAAAGATTGGACAGCGGAAGTTTTAACCATAATATTGGTGCCCATTTGGCTGACCAAACAAATGCAAGTGCGTCAATACTTCCGCAAATGAAGTTTGACACAAGAATATCAGAAGAGAAAATGAAGCAGAAGAATACATATGACTTGGGTAGTTCAAAGCTGCAGGGTGGATTTAATTCTAGTGGCTGCAATTTTGATGGCCTTCTCAATTCCATAATCAAAGTGGAGAAGGATGATCTCCCATTCATGGACAATGAATTGGGCTGTGACCTTTTTCCACTTGGTGCCTGCATATGA</cdnaseq>

Protein Sequence

<aaseq>MLLGALRMEERKGLMGRERDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVVRRKFGNRERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKRKELHGEDDDEGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKYRLYLKRLGAVASQQASIVAAFGGRDPSFLHIGAFEGLQSYQPFAPSAALPSFNPHGLLTRTSAAAAFGLQELAAPSSTIQTSTGNVTVGHCLEENQQANLAQGLTAAIGQPQLQQNWIHQEGNGLSDVFSGSSLTNTLSSTLQRVPSSSLPPQELLECKQAKVSMPPSIRIPPSSSALLERTLGVSTNLGDSSISQQGALPIDGGFSADRLPLHSSFDGAVATKLDTSLAASQREIGQQGKFSVSMLVSPSDNLALAKNAKTGASSSGSTIILPLDTARHSDYLQFGGASNSLQKMDGQKQDHIQSSNIIWSSMPSTQLPSDTQIHNTQSQRLDSGSFNHNIGAHLADQTNASASILPQMKFDTRISEEKMKQKNTYDLGSSKLQGGFNSSGCNFDGLLNSIIKVEKDDLPFMDNELGCDLFPLGACI</aaseq>

Gene Sequence

<dnaseqindica>1..154#447..599#735..1148#1272..1348#2533..3753#4111..4182#ATGCTTCTGGGTGCTTTGAGGATGGAGGAGAGGAAGGGATTGATGGGGAGGGAGAGGGATCAATTCCCCGTCGGCATGCGGGTCCTCGCCGTCGACGATGACCCGGTGTGCCTCAAGGTTCTTGAGACCCTCCTCCGGCGCTGCCAATACCATGGTCAGTATTTACAGTAACCGCAGCTAATTGTACTTCCATTATCAGCTATCCATGATGCTCAACTTGCTGGTTTTTTTGTTCGATTCTGCATGTTAATGACAGTGTTGTTCTTTTGCTTCTGCTTGCATTGTTCATTGTTGTATTGGAGTACTGTAGTTTTCTTAGAAATCTGAAATGTCACTGATACTAGCATACTTGGCACATTTTAGAACTTCTGTATATCTTATAAATGCAATGCAATATGCCTACTATGGTGCACTGATAAGAGCTCTCTTATGGTGATTTTTAACAGTAACATCAACCAACCAGGCTATTACTGCGTTGAAGCTGCTCAGGGAGAACAGGGACATGTTTGATCTTGTCATCAGTGATGTCCACATGCCCGACATGGACGGATTTAAGCTCCTTGAGCTTGTGGGGCTTGAAATGGATCTCCCAGTCATCAGTAAGTTCAGATTTTCATTTTTTCCCCTTAGTACAAACAAAGTTCTAGATAGGAAGGATCAGCTGTTGTGTAAAAATGTCTTAGCTGAATTTGAGCAAAAGAAATGGAGATGCTAATCGGGTATAATGCCTGCAGTGTTATCAGTAAATGGAGAGACAAAGACTGTGATGAAGGGGATAACTCATGGTGCCTGTGACTATCTTCTAAAACCGGTCCGAATCGAAGAACTAAGGAACATATGGCAGCATGTTGTTAGGAGGAAGTTCGGTAATCGTGAGCGAAACAATCTTGATTTCTCCAAAGAATGCAATAAGCCGCAAAGCGCGGATACTGATCATGGACCATACCAACCTACCTGTGGTTCTTCTGATCAAAATGGGAGGTCCAGCAGGAAAAGGAAAGAACTACACGGCGAGGACGACGATGAAGGCGATGATAATGATTATCAAGAAAATGATGAGCCCTCAGCTGCAAAGAAGCCCAGAGTTGTATGGTCAGTTGAGCTGCACCGAAAATTTGTTGCCGCTGTCAACCAGCTTGGAATTGACAGTAAGAAAGCACCCCCCCCCCCCCACCCCACTTTTTTGCCTTTCTGTAAATGTCCTTGCAGGTTTGCAGCAAACTCATTTATGTTTGTGTCCTTTTTTTTTTTTTACCTCACTGTTGATGCAGAAGCTGTACCAAAAAGAATTCTTGAGCTTATGAATGTGGAGAAACTCACCAGGGAAAATGTTGCAAGTCATCTACAGGTATAGCATTTACTTCCATGACAAAATTATCTGGGTGCCTTTTTTTTTTCTTTTCTTTTTATCCATTCATGAGAGCTCTTGAATTTTGCTCAACCGTCATCCTTTACATGTTCTTCTGTACCTTCAGTTGTTGATGCGTTTTTACTTCAGTTTATGAGGTCGTCCATCATTCATTCATTCATCAGGCCTGCACAAAGTGACAGAAAATCTCTTATCATTATACATGTTGCAAATGCTGATGCTGCACAGCATCGAGAATTCAAGATTCCACCACATGGTTGTCTGAACTCTGAAAAACTCACCATTTTATCACATCATTTACTCAACCTGCACAGAAATGTAGTACAACAAACTTCAGATCAGGATTGATCCACACAGACTGCACATTTTCTTCCCTGATGCAAAATTATCATCGATCCCGATGAACACCATCGAATCAAAGCTTCATCCACCATTTGATTTCATCAATGAAATGGAGGAGTCTGCACCTGAGCACACACGGCCACACAGCATATGTAGCTGGGTAGACCTTCACTCTACCAGAGTAAGCGATCCAGGCGGCCTCGATGGCGCCGCCGCGGCTCAAACTGGCCGGCCTCGTCGCTGTGGCAGCGGGCCAGCTAGGGGATGGCGGCGGCGCAGGGGCTCCGGCGATGGGATCTGAATCCAAACAGCAGAGAGGGTTTTGGTTGAGTTGCCACTGAACTGAACCTGCATATATTTTGGTCATCCATATCTGAAAAATGTGCAATACTTCAGATGTTTAGATCAGTATTTCCTCCAAATTCTTGCAAATATTTTCTTCGGCTCACGAAATTCTTGTTAGCATTGTTGGTTGTGAAGTGGCACACCTATAATCATGTTTGAATTTGACTCAGTCTCTCATCACCTTTTATTTAGTGTTGATGCAGTAAGAGTACTAGAACAGAGCTGATGTTTCCTACTACTTTCATGGCTAGCTAGAATTTTATGGTGTCATACAGGATAAATTGAACGAGGTTCCACCATTTTATCTTTGTTGTTCATATGCAACTAGATTTTATTAAACTGTTGAAATGCAAGAATGTGCAAACATCTCGTATGACAAATCCTAAACAATGTGCTATCTAAATCTGAAAATAGGTGATTTGCTGTTTAAAAACTCAAGTCCATATCTAATCAGTTGATTTTCATGTGACATGCAGAAGTACAGGCTTTACCTCAAGAGACTAGGTGCTGTAGCATCACAACAAGCCAGCATTGTTGCTGCCTTTGGAGGCAGAGATCCCTCCTTCTTGCATATTGGAGCATTTGAAGGACTCCAGAGCTATCAACCTTTTGCACCTTCTGCTGCTCTTCCATCTTTCAATCCACATGGCCTGCTAACCCGAACTAGCGCCGCCGCGGCTTTCGGACTTCAGGAGCTTGCTGCCCCCTCCAGCACAATTCAGACTTCTACAGGAAATGTCACAGTTGGCCATTGCTTGGAAGAAAACCAGCAGGCAAATCTAGCACAAGGCTTGACCGCGGCGATCGGGCAACCTCAGCTTCAACAGAACTGGATTCATCAAGAAGGTAATGGTCTGTCTGATGTTTTTTCTGGGAGTTCTCTGACCAACACTTTGTCCAGCACACTCCAAAGAGTTCCAAGCAGTTCATTGCCACCACAAGAACTCTTGGAGTGCAAACAAGCCAAAGTTAGCATGCCGCCATCGATACGGATACCGCCTTCTAGTTCAGCACTTCTTGAGAGGACTCTTGGGGTTTCCACCAATTTGGGAGATTCTAGTATATCCCAGCAGGGTGCTCTTCCAATAGATGGTGGATTTTCTGCTGACAGGTTACCATTGCACAGTTCATTTGATGGCGCTGTTGCAACAAAGCTAGATACTAGTTTGGCAGCTTCACAGAGAGAGATTGGCCAGCAGGGGAAATTTTCAGTTAGCATGCTTGTCTCCCCTTCTGACAATCTTGCATTAGCCAAAAATGCCAAAACTGGAGCTAGTTCTTCTGGCAGTACTATAATTCTCCCTCTTGATACTGCAAGACATTCAGACTACTTGCAGTTCGGAGGTGCAAGCAATTCTTTGCAGAAAATGGATGGACAGAAACAAGATCATATACAGAGCTCAAACATTATATGGAGTTCAATGCCAAGCACTCAACTGCCAAGTGATACCCAAATTCATAATACTCAAAGCCAAAGATTGGACAGCGGAAGTTTTAACCATAATATTGGTGCCCATTTGGCTGACCAAACAAATGCAAGTGCGTCAATACTTCCGCAAATGAAGTTTGACACAAGAATATCAGAAGAGAAAATGAAGCAGAAGAATACATATGACTTGGGTAGTTCAAAGCTGCAGGGTGGATTTAATTCTAGTGGCTGCAATTTTGATGGCCTTCTCAATTCCATAATCAAAGTGGTATGAACCTCTAATTTTCCTTTCCTTTTTCCCCATATAGTTTTAAATATTTATCTACATGAATATGCTCTTCCTTCTCATTGAGTAATTTAAATTGACTCCACTGTATTTAAGCACAAAGAACAAAGGCCACTCTAAATATTAAGCTGTAAACAGTTGTAACCTACACATAAACAGGATATGCCTAGCAGTACCTAATATTTGCATTTTCCATCTTGTTTTATATTATAGAAATGTTCTTGAGCCACATTTAACTTGGTTCTAACTTATCTAATCTCCATGGGACTTTACCTTTTGCATATATTCTTCTGAAAGAAATGATGGTTTACTGAAGCCTTAATTCTAATTCCAATGCAGGAGAAGGATGATCTCCCATTCATGGACAATGAATTGGGCTGTGACCTTTTTCCACTTGGTGCCTGCATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022430