BGIOSGA022444

From RiceWiki
Revision as of 13:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022444| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022444, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022444

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022444, complete gene.

LocusTag

OSJNBB0005A05.14-1

Ensembl Transcript ID

BGIOSGA022444-TA

Ensembl Protein ID

BGIOSGA022444-PA

Length

3676

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5025392..5029067

Sequence Coding Region

5025392..5025616,5026736..5026836,5027569..5027657,5028138..5028372,5028814..5028936
,5029046..5029067

Genome Context

<gbrowseImage1> name=IndicaChromosome06:5025392..5029067 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:5025392..5029067 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGATCTCGCTATTGCAGAGGAGCTCATCAAGCCGATCCGCTGATGTAGCCGCTGGCAGTCCTAGCCAGCCCGGCCGAGCTCCGCCGTCACCACCTCAAGCACCCACTGAAGCCGCAAGTGACCTCACCCACATCTTCTTTGTGGAGGTAGCGGTGAACACCCCTGCGGCGGTCGTCGCACCGCACCACATCGGACTACCTCGGCGGTGGGGTGAGTTGGAGGTGCAGGTTGCGATGGCCCGCGTGTACGTCGGAAACCTGGATCCCCGCGTGACGGCGCGGGAGCTCGAGGACGAGTTCCGCGTCTTTGGAGTTCTTCGGAGTGTATGGGTCGCAAGAAAGCCACCAGGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCAATTCGTGATATAGATGGCAAGAATGGATGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGTGGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAGACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTCCAAGCTATGGCAGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MPISLLQRSSSSRSADVAAGSPSQPGRAPPSPPQAPTEAASDLTHIFFVEVAVNTPAAVVAPHHIGLPRRWGELEVQVAMARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDGKNGWRVELSRNASSGRGGRDRYGSSESKCYECGETGHFARECRLRIGSGGLGSGRRRSRSRSRSRSPRYRRSPSYGRRSYSPAGRSPRRRSVSPARARSYSRSPQYNRGRDESPAYDNGYRRSRS</aaseq>

Gene Sequence

<dnaseqindica>1..225#1345..1445#2178..2266#2747..2981#3423..3545#3655..3676#ATGCCGATCTCGCTATTGCAGAGGAGCTCATCAAGCCGATCCGCTGATGTAGCCGCTGGCAGTCCTAGCCAGCCCGGCCGAGCTCCGCCGTCACCACCTCAAGCACCCACTGAAGCCGCAAGTGACCTCACCCACATCTTCTTTGTGGAGGTAGCGGTGAACACCCCTGCGGCGGTCGTCGCACCGCACCACATCGGACTACCTCGGCGGTGGGGTGAGTTGGAGGTGAGCTCCTTGTGGATGCCGACCTCGCCATTGTAGAGTCCCCGCCCATTGACGAGGTCGACGACGTGAAAGGATATGAGGGAGGGGGCAGGCAGACGCGAGGGAGGAGCTCGTCAAGCCGAAATGCTGTCGCTGGTGGTCCCAACGTCTACCCCTCCGGCACCGGCAACCATGATGAGATCCCACTCTAGCTCGTGGAACACGAGTGGGAGGCTACAGAGGGCGAGGCGACATGAGGTGTCGGTAGCACGGCAAGGTTTGGTTAGGATGTGCAGAGCTGGTGGTGGTGGAGGGCAATGAGTTCACGAGCGGTCGAGGGTGCCGGAGCTGCTGCTGTCGGTGGTGCCATCCTCCTCACCGGCTGCTCTTCCTCACCGTCTGTTGCTGGGCGCTGCCCGATGATATGAGCACAGAGGAGAGATTGAGAGAGAGGGGGGAGGGAGGGGGGGGGGGTGAACGGGAAATGGTCATTGACAAGTGTGCGTCGACATATGCTACGTCAACAAAAACCGAGGATAATATGGTCCATATTGCTAAGGGACTTATTTTACATGGTTTCGAATACTTGAGGGGTCAACATTTCTAACATTGAGGATTAGGGGGACGTCATGTAGACTCGATCTGAAGTTGAGGTACTGAGAGTGAACTTGTTCCAAAAAAACTGAAAACAATAAGCCCACTATGAGTCCACGGGCCCAAAGACCCAGGCCCAAACCGCGTGCCGTTTCCCTGCACAAGCCCAACCCCACACATATCATCTCATCCCATCTCTCCCCCGTCTTCTCGAACTCTCCATCTCGGGATCTCGCCCACCCACCACTCCACCCCCTCTCCTCTCCGTGCGCCGCCGCAGAATTCCTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGAGGTCCATCGAGATCGCGACCGGAGCAGGTGGGTGATCCGCTCCCGCCTCTCGCCTCCCCCCTCTTACCTCCCCTCCTTCGTGATTTCCCCGGTCCCAAACCCTAGATCCGCCGCACGGCCCCTTGCGGGATTAGATCTATCGGTCTCGGGGGGCAGGTCTCTACGTCGTTTTTGTGATTCGTTGTTTAATCCGATTGTATTTTTGTTTTCTTTTGGCGATTTGATAGGTGCAGGTTGCGATGGCCCGCGTGTACGTCGGAAACCTGGATCCCCGCGTGACGGCGCGGGAGCTCGAGGACGAGTTCCGCGTCTTTGGAGTTCTTCGGAGGTTAGTGACTCGCCCCACCTGTGGTATGTATTGTGTGCGATTGTTTCGGTTTTCTGCTAGAGCTGCGTGAGCATGTGGAATCATATGGGGGAACATAGCTTTAGTCCACCATCGGAACAGCAAAACTCGTTCTAGGGCCAGGGCCTGAGTGACCTATGCAGCCACATTTATGTAACTTTTGGGGAAGACGATTGGCCATACCAGCAGTGCACGGTGAAATTTTAAATGTTGTAGGCTTTTCTGAAATCCTGTTCCGACCCTAGTAGATTTTACTGTAATAGAAGAGGTAGAGAGGGAATTTGATGGATTCATTTTACTCAAGATTATCTTATTACAAGTCGTTATTTATTTATTTATTTTGAGATGTATTGATCTTTCTAGAGCACAATTACTTCCCAGCTATGGCATCCAGGCTTTAGATTGCAGTGTACCCATCTACCTGACATCAATGGCCTCCAACCAAACACTAGACTTCAAGCACCTTGGATTAGATTTTATCAGGATACAAATTCAACTCATTCAGATATCTACAACACTTATTTGGCTAATTTACTGTATGCTGGAGATGCTTTTACGGTTTTTCTGTTGCCTAACTTTTTCTTATTTTCTTGATGTGCTGCCAATAAGTTTCTTACCTGAGGCCATGTATTTGTATTTTGCACCCACAATTCAAATTATGTTTGATGCTGATTGTCCTGATGCAGTTTGCTTATTTTTGTTTTGTGCAAGCAGTGTATGGGTCGCAAGAAAGCCACCAGGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCAATTCGTGATATAGATGGTATGTGAATGCTTTTATGAGAACATAGCCTCTGTCAGTTGGATCTATCACCTCTGAGAATCTTTCTGCTCTGATTTTCTTTTGGTGAGTTACAGGGTGGTCTTTGCTTGCAAAAATATCTTGTGAAAGTTAAACTTCTTTCAAAGGCCATGATATATGCCTATTAGTGACAACATGTGTTACCATTATATCTATACTTTGTTTTAGTACCAGAATTATGTGAATGTGATGTGGCCTGCTGTTTAGATTATGCTTTTCCTCCCAGTCCCTCTCTCTCATCCACCAAAACACCTCCTTGCACTGTTATGTTAGAGCAATTTCATGTTTGTGCATTAATCACTTGGACGTATAAGCTGTTTGGACATTGTCAAGAGGGTCAAGATCCTACATTTATGGGGGAAGTGGGGTGAGGCGATAAGGCGTAAAACAAACAGTAGTGACAACTCTGAATTTCTAATTTTTAAATGGCTTCTTTTATAGGCAAGAATGGATGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGTGGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAGACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTCCAAGCTATGGCAGAAGGTAATCAAAATGTCAAATAACTGTTACACTGTTGCAATAGTTAAAAGCTTTTTGTTACTATAAGTTAATGGTCACAATACCATTGTTGGGACTGTTGGTTCTGCTATGGATGTGAAGTGTTAGTGGTTTGCAACCCTACTCACTCTTTGATACAACTAAGTTATCTTTCTGTATTCATTGTAAAACATTATATGACATGCACACAATTTGTTAATTTAGGGGTGCCTATGGTCCAAATTTACAAACACTAAGATAAAGCTTGCAATTTTTTCTATTCAGTATTTATCCACCTCTTGCCATTTCCCAACATCTAGGATAGTAAGTGCTAGCAAAGAATAGTGTAGCATTTATGCCCTGTTTTGTGTATGTAACTAGTATATTTACACGAAGAAGAAGAATAACATATCTGATAATGTTATAAATGATTTGCTATGTGAGCAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGGTAATGCAGATTTCAGTAAGCAGTTGTCATTTTACTGTTTCTAACTGAGTTAACCATTTTCATCGTTCGCTCTTCGACAATCTCTAATATGTTCCATTTATGGTGTAAGATATCGCCGCAGCAGAAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022444