BGIOSGA022457

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Revision as of 13:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022457| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022457, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA022457

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022457, complete gene.

LocusTag

OSJNBA0090D06.52-1

Ensembl Transcript ID

BGIOSGA022457-TA

Ensembl Protein ID

BGIOSGA022457-PA

Length

6581

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5246515..5253095

Sequence Coding Region

5246515..5246570,5246677..5246726,5246819..5246899,5247411..5247627,5248768..5249155
,5249378..5249581,5250719..5250879,5250947..5251132,5251277..5251508
,5252075..5252277,5252619..5252753,5252912..5253095

Genome Context

<gbrowseImage1> name=IndicaChromosome06:5246515..5253095 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:5246515..5253095 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTCGTTCCCTTCCTCCGGCGCTTCTCCGCAGAAGCAGCAGCACAACGCCAGGAGGAGGCAGCTGATTCGGCAGCAGAGGAAGTCGCTCCCCATCGCCTCAGTGGAGAAGAGGCTTATTGAAGAGGTGAGGAAGAATGACACGTTGATCGTTGTCGGCGAGACCGGAAGTGGCAAGACAACTCAGTTGCCACAATTTTTGTATGATGCTGGGTTTTGTCAGGATGGAAAAGTCATTGGCATAACTCAGCCTCGAAGAGTTGCAGCTGTTACTGTAGCAAAGCGTGTTGCTGAGGAATGCAATGATCAGTTGGGCAAAAAGGTTGGCTATTCTATTAGATTTGATGATTCGACATCAAATGCAACGAGGATTAAGTACATGACTGATGGTTTGCTTTTAAGGGAGGCACTTCTGGATCCACTTTTGTCTAAGTATAGTGTCATAGTTGTTGATGAGGCACACGAAAGAACTGTACATACTGATGTCTTGTTGGGTTTGCTGAAAAAAGTGCAACATTCCCGATCCATTTATGCCAATAAGAATGGAAAGATTTTGCCTGACATACAAGATCAGTCTCAATATTTTACTCTGAAGGCATGCCAAGGAACAAAAATTGATCCTCTAAAACTGATAATTATGTCTGCTAGTTTGGATGCAAAGTGTTTTTCAGATTATTTTGGCAGCGCTAAAGCTGTACATATTCAAGGACGGCAATACCCTGTCGACATACTATACACTTATCAGCCTGAGTCAGATTATCTGGACGCTACACTAGTTACTATCTTTCAGATCCATTTGGAGGAAGGACTGGGGGACATTCTTGCATTTCTTACTGGCCAAGAGGAGATTGAGTCACTGGACAGACTTATTCAGGAGCGTGCTCGTCAACTTCCACCACAGAGAAGTAAGATATGGACTACACCTATTTACTCATCTCTTCCATCAGAGCAGCAAATGAATGCTTTTAAGCCTGCACCAGCTGGAACTCGCAAGGTGGTTTTAGCAACAAATATTGCAGAGACTTCTGTAACAATACCTGGTATCAAATATGTTATTGATCCTGGGATGGTCAAAGCTCGTGCTTATAATCCTGTAACTGGAATGGAATCTCTGATCATTATCCCTGTTTCGAAAGCACAGGCTCTTCAGAGGAGTGGCCGTGCCGGACGAGAGGGACCAGGGAAGTGCTACCGATTGTTCCAAGAAAGTGAGTTTGATAAGCTGGTGGATTCTACTGTGCCTGAGATCAAGCGATGTAACCTTGCAAATGTTGTACTACAGCTCAAAGCTCTTGGAATTGATGACATCATAGGTTTTGATTTTATGGAGAAACCATCAAGGACAGCTATTTTGAAATCATTGGAGCAGTTAATTTTATTAGGTGCTCTGACTGATGATTATAAGTTGTCAGATCCAGTTGGTCGTCAGATGGCTAGGCTACCTTTGGATCCAATGTACTCCAAGGCACTAATAGTAGCAAGCGAATTCAAGTGCTTGGAAGAGATGTTGATTGTTGTCTCTATGCTTTCAGTGGAATCTATTTTCTTCAGCCCACGTGAGAAGTTAGAAGAGGCAAGAGCTGCTAGGAAGAGTTTTGAAAGCTCTGAAGGGGACCACATAACCTTGGTGAATGTATATCGAGCCGCTAAAGAATGCTTGGAGAAAAGCAAAAATGCAAATGCCAAAGAGAAAACAATGGAAAAGGCATTGAACAGATGGTGCAGGGAAAATTTCATCAATTACCGGTCTCTAAGACATGCTTGTGATGTTCACAGCCAAATTCAGGGCCATGTCCAACAAATGGGGCTTAACGTATCATCGTGTGGGGATGACATGGTTCTGTTCCGGAGATGCCTCACAGCTGCTTTCTTCTTGAATGCCGCAATGCGACAGCCAGATGGATCATACAGGGCTCTTGCAACCAGCCAGAGCGTGCAGATCCATCCGTCATCGGTGCTCTTCCAAAAGAAGCCAGATTGTGCCATCTTCAACGAGTTGGTTCGAACGAGTCAGAATTACGTCAAGGACCTGACCCGGATCGATCCCGTGTGGCTGGCTGAACTTGCCCCGCAATATTACGCCACTGAGGATTGA</cdnaseq>

Protein Sequence

<aaseq>MPSFPSSGASPQKQQHNARRRQLIRQQRKSLPIASVEKRLIEEVRKNDTLIVVGETGSGKTTQLPQFLYDAGFCQDGKVIGITQPRRVAAVTVAKRVAEECNDQLGKKVGYSIRFDDSTSNATRIKYMTDGLLLREALLDPLLSKYSVIVVDEAHERTVHTDVLLGLLKKVQHSRSIYANKNGKILPDIQDQSQYFTLKACQGTKIDPLKLIIMSASLDAKCFSDYFGSAKAVHIQGRQYPVDILYTYQPESDYLDATLVTIFQIHLEEGLGDILAFLTGQEEIESLDRLIQERARQLPPQRSKIWTTPIYSSLPSEQQMNAFKPAPAGTRKVVLATNIAETSVTIPGIKYVIDPGMVKARAYNPVTGMESLIIIPVSKAQALQRSGRAGREGPGKCYRLFQESEFDKLVDSTVPEIKRCNLANVVLQLKALGIDDIIGFDFMEKPSRTAILKSLEQLILLGALTDDYKLSDPVGRQMARLPLDPMYSKALIVASEFKCLEEMLIVVSMLSVESIFFSPREKLEEARAARKSFESSEGDHITLVNVYRAAKECLEKSKNANAKEKTMEKALNRWCRENFINYRSLRHACDVHSQIQGHVQQMGLNVSSCGDDMVLFRRCLTAAFFLNAAMRQPDGSYRALATSQSVQIHPSSVLFQKKPDCAIFNELVRTSQNYVKDLTRIDPVWLAELAPQYYATED</aaseq>

Gene Sequence

<dnaseqindica>1..56#163..212#305..385#897..1113#2254..2641#2864..3067#4205..4365#4433..4618#4763..4994#5561..5763#6105..6239#6398..6581#ATGCCGTCGTTCCCTTCCTCCGGCGCTTCTCCGCAGAAGCAGCAGCACAACGCCAGGTGCGCGCACACACCCCTCGCCCGCAGCCTGCCTCCCCGCGGCTTCGTTTCTCTCTCGCTCTAGTTCGTTTGCGTGGGTGTTTTGACTGGTACGGGTGGTGGGCAGGAGGAGGCAGCTGATTCGGCAGCAGAGGAAGTCGCTCCCCATCGCCTCAGGTTAGTCGGAGCATATGGGGTTTTGGGCTGTGATTTTGGGGTTGTTTAGTTAAGTTTTACATGGGTTAAATTTGTTGCTGATGATGGTGCAGTGGAGAAGAGGCTTATTGAAGAGGTGAGGAAGAATGACACGTTGATCGTTGTCGGCGAGACCGGAAGTGGCAAGACAACTCGTAAGTTTGTTGCTGCATTTTGCTTTTATCATCACACATTATTGCCTATTGCTTTGTGAGGCTTGCGGTTTTTAGTTTGTGTAGGCCAGCAACTATTATGCCACATTGTATTACTCATATGCTTGTTGAAGTGGTATGTGCTAGTGGCTTGTGGAGTCTGGAACATTGCCACATTGGCAAAATCGTTCTTGTTCAGCCAACCAAAGGAGTATCTGTAGTCAGTTCTCAGCTAAATTTGCGTTAAAGAAATTCTAAAATTCTATTCCCCTAATCTCATTGGATTGTTGTGCACTAGTGTGTTTGGTCCTTAGGAAGATTGTTTGTGTGGATTTTTTTTTGTCAATAACTGTCAAAATTTCTTTATTTGGTTTATTTTAAGGAGCATATCATCATTGGTTATTGTAGAAACATTTAACGTTACCTAATCATTTATTACATAATCTTTATGCCATTTATTTCAACCTAGCCGACTGACGAAGCACATATTCTTGTGCATTTTATTCTTATGCAGAGTTGCCACAATTTTTGTATGATGCTGGGTTTTGTCAGGATGGAAAAGTCATTGGCATAACTCAGCCTCGAAGAGTTGCAGCTGTTACTGTAGCAAAGCGTGTTGCTGAGGAATGCAATGATCAGTTGGGCAAAAAGGTTGGCTATTCTATTAGATTTGATGATTCGACATCAAATGCAACGAGGATTAAGTACATGACTGATGGTTTGCTTTTAAGGTAATATTATATTTACGGAACTATTAATTATTTGATTATTGTGCGGTTTATTGTTTTATGTAGTTCTTTGATTCCAGCTCATATACTAGTTTCTGTGTTATTTGGAATCTGGGCATAGCAGTTGCCATATACTCTGTCTCTGGCTTGATTGTTGAACCAAAGATTATTTCTTGGACAAAAGGGATACGCCTGGCTTTGCTGAAAGCATAACAGGTTCTACAGAAAATTTGCTGGGCATGCCAGCTTGATTACAAACCGCAAAGCACAGCCATCTAACCCTTAATGCTAAACTAAAACATAGAAGCAAAAATGGGCCAACATTCCCCATGAACAGACATGAACCGAAGATTATTAGATTCACATATATAAGAAAATTGTTCCACCTATTTTTTTCAAGGGATACAACACTGAATTTCTGTATCAAGGATGATGGCTGCTTGCTTATGTTTTTTCTATTATGTTCATATCATAAAAAGTCATTTATGAGTTAGAATTGGTGCAAGTAAAGAAAAACAACGGCTGGATATACATATTTGATGTCACAGTTTGGTGGCACTGATAATCCTTTAGATATCCAAGCATTTTTCTCATATATTTAATATTTTGTAGCAGTAGGCATCCTTACATCTGCATTAGTATAGTTCATTTATCATTTAATTATTTTCTTCAGAGCTAAATATGTACCTTTTTCAATCTTTTTTTTGTTGCTTTTGTACTTTGTAGATTTTAATGTGTGACCTTTTCTTTTTTCTTATATTGCTTTTTTTTTAGAAAAATCAATAAAGTTCAATTTAACTACTACCTCCGTTTTTTAATAGATGACATCGTTGACTTTTTCTCACATGTTTGACCATTCGTCTTATTCAAAAATTTTATGCAAATGTATAAGATATAAATCACACTTAAAGTACTATGAGTTATAAAACAAGTCATAAGAAAATAAATTATAATTACGTAAATTTTTTGAATAAGACGAATGGTCAAACATGTGAGAAAAAGTCAACGGCGTCATCTATTAAAAAACGGAGGGAGTATATGTTATCATGTTACAGATGGCTAAGTCTTCTTTATATGTATCGCTTTTTTGTTCTTCTATGTCAATTTCTCTTTCATAATAAAAGTGTTCCCTTGGATTTGCAGGGAGGCACTTCTGGATCCACTTTTGTCTAAGTATAGTGTCATAGTTGTTGATGAGGCACACGAAAGAACTGTACATACTGATGTCTTGTTGGGTTTGCTGAAAAAAGTGCAACATTCCCGATCCATTTATGCCAATAAGAATGGAAAGATTTTGCCTGACATACAAGATCAGTCTCAATATTTTACTCTGAAGGCATGCCAAGGAACAAAAATTGATCCTCTAAAACTGATAATTATGTCTGCTAGTTTGGATGCAAAGTGTTTTTCAGATTATTTTGGCAGCGCTAAAGCTGTACATATTCAAGGACGGCAATACCCTGTCGACATACTATACACTTATCAGCCTGAGTCAGATTATCTGGACGCTACACTAGTTACTATCTTTCAGGTGAGCATCTCTTGTAAAAGGTGGATGAATTAGGCAGGAGAATTAGAAATTGAAATCCACACAAAATATGATTTCAGAAAGAAAAACTTTTGTCAGAAAACATTATAAGTGATATGCAATCTTAGCTGGAACTATGTTTCATATTACTGTTGTTTCAACTATGACTTGATATAGTCAGTTCATTGTATAAAAACTTCATACTGAAATGTTTGCTTTTTATAGATCCATTTGGAGGAAGGACTGGGGGACATTCTTGCATTTCTTACTGGCCAAGAGGAGATTGAGTCACTGGACAGACTTATTCAGGAGCGTGCTCGTCAACTTCCACCACAGAGAAGTAAGATATGGACTACACCTATTTACTCATCTCTTCCATCAGAGCAGCAAATGAATGCTTTTAAGCCTGCACCAGCTGGAACTCGCAAGGTAAACCTAATATATTACATTTTTTGGATGTTTACTTCAAAGGTGTAAATCGCAATTTTTGTAGAATGATCCCAGAAAGCAAATAGCGCTTGATGACCTGCAATTTAAAATCTTGCTGGCTTGCTTACAATCTATATTTTCTTTACCGATGAGTTCTTCAACTGCTACTCTTTATGCCTGATGTTCCTTCTGGACATAACTTACTGGTGGGGTTGAATAGGTTGTTTCTAATAAACAAAACCATACTTCATTAGAGTATGCAGTTGCAAGTTGGGAGAGCATTGGAACCACGTGTTGTCAGATATACGTGTGACCATATTTATGCATGTTGATAGCGATGCAATTAATACTATACCCAAACCGTACATCATTCCAGATGCCATATGAATTATGAACTATACTCTGATGATCTGCCGAAATTATTTATCTGCAGTAAATAAAAATAGTTGCACCTTCTAAACAAAAATTATATTAATCCATTTTTCAAGTTTGTTTAGGCTAATACTTAATTAATCTTACTATAATTGTGTGCTTGGTTTTCCGTGTTGGGAGGCAAGGTTCCCAACCTTGTAGTATTATACAATTTGTCTTGATGTTGATTATTCCCTGAAGAAGCATAAGTGTAAACTTATGAGGAATTAAGCATACAAGGGAAATGATTTCCTGTATAGGCTGTCATTTGCTCACTTCTCTGTTGCTTAAGAAAACTAAGTACTCCCTTTGTCCCATAATAAGCAACTTTTAGCATTCAAAATTTGTCCCATAATATAGCAACTTCTCCACCTACCCCCTCATCTCAACCAATTACAACCATCTCCCATTTAATTTTTTCACCTACTTCCTCTGGTCAACCAATCACGACCTTCCTGCATTTAATTCCACCTACTTAATAACATGTACCTAACTCCAAAAACAATATTTTTGGATGGAGGGAGTAGATTTTATGGGAAAAGTTCATGTTGGAATATTATTTATTTTTTTAGCTGTGTTTACCTTTTGAATCTTATGGTAATTATTCTAGGATATTGGGCTTTCCTGATAAATATTACTTGTCAAGAAAACATTACCCCCCCCCCCCCCATCCTTGTAAAATGGTAGGTTCGCAGCATTAACTGATGCTCAACCCGTTTCTGTCAGGTGGTTTTAGCAACAAATATTGCAGAGACTTCTGTAACAATACCTGGTATCAAATATGTTATTGATCCTGGGATGGTCAAAGCTCGTGCTTATAATCCTGTAACTGGAATGGAATCTCTGATCATTATCCCTGTTTCGAAAGCACAGGCTCTTCAGAGGAGGTAAATATTTTTTAAGCATTTGTAAATCACGTGTGCCTTTTTCTCTTACCTTGTGATCTATATTCAGTGGCCGTGCCGGACGAGAGGGACCAGGGAAGTGCTACCGATTGTTCCAAGAAAGTGAGTTTGATAAGCTGGTGGATTCTACTGTGCCTGAGATCAAGCGATGTAACCTTGCAAATGTTGTACTACAGCTCAAAGCTCTTGGAATTGATGACATCATAGGTTTTGATTTTATGGAGAAACCATCAAGGTAATCTGTTTTTTTTCTGTTCTTTTAATCTTTTACATGCAAACAACAATATGCTCTGGGCTTCTCAGTATTCACTCTACTTTAATAGCAAGCTGCTTTATTTGGTAACTAAGTTTTCACTATTTTGTGTCAAACCTACTGCAGGACAGCTATTTTGAAATCATTGGAGCAGTTAATTTTATTAGGTGCTCTGACTGATGATTATAAGTTGTCAGATCCAGTTGGTCGTCAGATGGCTAGGCTACCTTTGGATCCAATGTACTCCAAGGCACTAATAGTAGCAAGCGAATTCAAGTGCTTGGAAGAGATGTTGATTGTTGTCTCTATGCTTTCAGTGGAATCTATTTTCTTCAGCCCACGTGAGAAGTTAGAAGAGGTATTATATTCGAATCCTGCGAATGATTAAACCACAAAGTGTTCTTATTTGAGATTATGTTGGTACTGGTATATTCCAGTTATGCTATTCGATCCAAGTTTACTCTTCTTGCAATACCAGGCACTAAATGCCTTTAAGGTTCTAGGTTATTGCTGATTAAGAAATACATTGCACCAAACATATATTTTATAAACACATTTTAAAGTCTAATGAACACTCTATACTGTCATTATACAAGCTTTGGACAAACCAGAACATTATTTAACTCAACACTGCTATACTTGTCTCGTCCATCTTTGGATGGAGCAGAGTTCACCCAGTTCACCCAGTTGTGAACTTGTGATAAAGATAGCAGTTTATTTAGTTATGTTGTGGAATCTTTTACTGTGAAATCCTTTTGAAGTACCTTAAGACCTGAAATTATCATGATTTGTCATTTGCGTATTGACAAGGAAAACTAACATACAACATGTATTTTGATAGGCTACCACTGTTCGGTGATGATAAAGAACTTCAGTTTGTTGCTAACTAAATAGTTCACTTATTGATCCCGAATTCTTATGTAGGCAAGAGCTGCTAGGAAGAGTTTTGAAAGCTCTGAAGGGGACCACATAACCTTGGTGAATGTATATCGAGCCGCTAAAGAATGCTTGGAGAAAAGCAAAAATGCAAATGCCAAAGAGAAAACAATGGAAAAGGCATTGAACAGATGGTGCAGGGAAAATTTCATCAATTACCGGTCTCTAAGACATGCTTGTGATGTTCACAGGTTAGTCAAAATATTGTTCTTGATGGATTCATGAAAAGCTTGAACTATCAACTCAACTGCGAAAAAGATGGCTAGCCGGAGCCCTCAGGGTGTCTTAGCAATGCTGCACTGATCACAAAGCATGGCACTGTATTGTATTTGTAGCATTAGCACTTGAACTATCTGTGGTTGAAGAAACATTTCACCTTATATTAACATTTATTTTAGGACCATTGGAAAATATTCAAAATTTCAAATTAACCTGACATGTTAGACTTTAAGAAATGAAAAGGAACAAAATTCTATCTCGTAAATTTCAGAGTATGGTGCGAGCTTGACATAGGTATTTTTGTTTGTTGCAGCCAAATTCAGGGCCATGTCCAACAAATGGGGCTTAACGTATCATCGTGTGGGGATGACATGGTTCTGTTCCGGAGATGCCTCACAGCTGCTTTCTTCTTGAATGCCGCAATGCGACAGCCAGATGGATCATACAGGTATTACTACGGTTTTCCTCTTTTTCTTGATCTAAATAACTCATCCTAACTATCTTTTCCTGCACTGAAATCCAAGACTACCGCTACAGACTAAAGTTACTGCACACTTAATAGAGAGTTCTTTTGTTGAAGCTAATCAGTAACCTGTTGATTGGCAGGGCTCTTGCAACCAGCCAGAGCGTGCAGATCCATCCGTCATCGGTGCTCTTCCAAAAGAAGCCAGATTGTGCCATCTTCAACGAGTTGGTTCGAACGAGTCAGAATTACGTCAAGGACCTGACCCGGATCGATCCCGTGTGGCTGGCTGAACTTGCCCCGCAATATTACGCCACTGAGGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022457