BGIOSGA022468

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Revision as of 13:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022468| Description = BGIOSGA022468| Definition = Oryza sativa Indica Group BGIOSGA022468, complete gene.| tag = | tid = BGIOSGA022468-TA|...")
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Gene Name

BGIOSGA022468

Description

BGIOSGA022468

Definition

Oryza sativa Indica Group BGIOSGA022468, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA022468-TA

Ensembl Protein ID

BGIOSGA022468-PA

Length

5683

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5544029..5549711

Sequence Coding Region

5544029..5544074,5544323..5544435,5544527..5544622,5544720..5544776,5544862..5545017
,5545119..5545203,5545444..5545534,5545613..5545777,5545867..5546062
,5546310..5546448,5546904..5548591,5549292..5549482,5549567..5549711

Genome Context

<gbrowseImage1> name=IndicaChromosome06:5544029..5549711 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:5544029..5549711 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGATCAGGGATCATCCGGTGTGTCTCCCGCCCCAGGGGAAGGGGAGAAGAAAGCCATCAATTCGGAGCTATGGCATGCTTGTGCCGGGCCTCTTGTGTCGCTGCCGCCGGTGGGCAGTCTCGTCGTGTACTTCCCTCAGGGTCATAGCGAGCAGGTTGCTGCTTCCATGCACAAGGAGCTGGACAACATCCCTGGTTATCCCTCTCTTCCGTCTAAGCTGATCTGCAAACTTCTGAGTCTCACCTTACATGCAGATTCTGAAACTGATGAAGTTTATGTTCAGATGACACTTCAACCAGTCAATAAATATGATCGAGATGCAATGCTGGCATCTGAACTGGGCCTGAAGCAAAACAAGCAACCAGCGGAGTTCTTTTGCAAAACGCTGACGGCGAGCGACACAAGTACCCATGGTGGATTTTCAGTGCCACGTCGTGCGGCGGAGAAGATATTTCCACCACTAGACTTTACCATGCAACCACCAGCACAAGAGCTCATCGCCAAGGATCTGCATGATATTTCATGGAAATTTCGACACATTTACCGAGGTCAACCAAAGAGGCACCTTCTGACAACTGGTTGGAGCGTCTTTGTCAGCACAAAAAGGCTTCTAGCTGGTGATTCAGTTCTGTTTATAAGGGATGAGAAATCTCAGCTTCTATTAGGCATACGTCGTGCTACCAGACCCCAACCAGCTCTATCGTCATCAGTTCTATCAAGTGATAGCATGCACATTGGGATTCTAGCTGCTGCAGCACATGCTGCTGCAAACAGTAGCCCATTTACTATTTTCTACAATCCAAGGGCAAGTCCATCAGAATTTGTCATTCCTTTAGCGAAATATAACAAGGCTTTGTATACACAAGTATCTCTTGGAATGCGGTTCAGAATGCTGTTTGAGACAGAGGATTCAGGGGTTCGAAGATATATGGGAACAATCACAGGTATTGGTGACTTGGATCCAGTGCGCTGGAAGAACTCTCATTGGCGAAACCTTCAGGTTGGTTGGGATGAATCAACAGCATCTGAGAGGCGCACTCGTGTTTCAATATGGGAGATTGAACCAGTCGCGACACCTTTTTATATTTGTCCACCACCATTTTTCAGGCCAAAACTTCCTAAGCAGCCAGGAATGCCAGATGATGAAAATGAAGTTGAGAGTGCTTTCAAAAGAGCCATGCCATGGCTTGCTGATGACTTTGCCCTGAAAGATGTGCAAAGTGCATTATTTCCAGGTCTGAGCCTAGTCCAATGGATGGCTATGCAACAGAATCCTCAGATGCTAACAGCTGCGTCCCAAACAGTGCAATCACCGTACTTGAACTCCAATGCATTGGCTATGCAGGATGTGATGGGTAGTAGCAACGAGGACCCAACAAAAAGATTGAACACACAGGCACAAAATATGGTTTTACCTAATTTACAGGTTGGCTCAAAAGTGGATCACCCTGTAATGTCTCAACATCAACAGCAGCCACACCAACTATCACAACAGCAGCAGGTCCAGCCATCGCAGCAAAGTTCTGTGGTTTTACAGCAACATCAAGCCCAGTTGCTGCAGCAGAACGCCATTCACTTGCAGCAGCAGCAAGAACATCTCCAGCGGCAGCAGTCACAACCGGCACAGCAGTTGAAGGCTGCTTCAAGTCTGCATTCAGTGGAACAGCACAAGCTGAAAGAACAGACTTCAGGTGGGCAGGTTGCCTCACAAGCACAAATGTTAAACCAGATTTTCCCACCATCTTCATCGCAGCTACAACAGTTAGGTTTACCCAAGTCACCTACTCATCGCCAAGGGTTGACAGGATTACCAATTGCAGGTTCTTTGCAGCAGCCCACACTAACTCAGACATCTCAAGTCCAGCAAGCAGCCGAATATCAGCAGGCCCTCCTACAGAGTCAGCAACAGCAACAGCAACTGCAACTGCAACAACTATCACAACCAGAAGTACAGCTGCAGCTGCTTCAAAAGATTCAACAACAAAACATGCTATCTCAGCTGAACCCACAACATCAGTCCCAGTTGATTCAACAATTGTCTCAGAAAAGCCAGGAAATTCTACAGCAACAAATTTTGCAACATCAATTTGGTGGGTCTGATTCTATTGGTCAACTCAAGCAATCACCGTCGCAGCAAGCTCCTTTAAACCACATGACAGGATCTTTGACGCCCCAGCAACTTGTCAGATCACATTCGGCACTTGCTGAGAGTGGGGATCCATCCAGTTCAACTGCTCCATCCACCAGCCGTATTTCTCCAATAAATTCGCTGAGTAGGGCAAACCAAGGAAGCAGAAATTTAACTGACATGGTGGCAACACCACAAATTGACAACTTACTTCAGGAAATTCAAAGCAAGCCAGATAATCGAATTAAGAATGACATACAGAGCAAAGAAACAGTCCCTATACATAACCGACATCCAGTTTCTGATCAACTTGATGCATCATCTGCTACCTCCTTTTGTTTAGACGAGAGCCCACGAGAAGGTTTTTCCTTCCCTCCAGTTTGTTTGGATAACAATGTTCAAGTTGATCCAAGAGATAACTTTCTTATTGCGGAAAATGTGGACGCATTGATGCCAGATGCCCTGTTGTCAAGAGGTATGGCTTCAGGAAAGGGCATGTGCACTCTGACTTCTGGACAAAGGGATCACAGGGATGTCGAGAATGAGCTATCATCTGCTGCATTCAGTTCCCAGTCATTTGGTGTGCCTGACATGTCCTTTAAGCCTGGATGTTCAAGTGACGTTGCTGTTACTGATGCCGGAATGCCAAGCCAAGGTTTGTGGAATAATCAAACACAACGGATGAGAACTTTCACTAAGGTTCAAAAGCGTGGTTCTGTGGGGAGATCAATTGATATCACAAGATATCGAGATTATGATGAACTTAGGCATGATCTTGCATGCATGTTTGGTATCCAAGGTCAACTTGAAGATCCATATAGGATGGATTGGAAGCTAGTCTATGTTGATCATGAGAATGATATCCTTCTTGTCGGCGACGACCCTTGGGAGGAATTTGTGGGCTGTGTGAAGAGCATCAAAATACTCTCAGCTGCTGAAGTACAACAGATGAGCTTGGATGGTGACCTTGGTGGCGTCCCTCCACAAACACAGGCCTGTAGTGCCTCTGATGATGCAAATGCATGGAGAGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MKDQGSSGVSPAPGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLICKLLSLTLHADSETDEVYVQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFFRPKLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSALFPGLSLVQWMAMQQNPQMLTAASQTVQSPYLNSNALAMQDVMGSSNEDPTKRLNTQAQNMVLPNLQVGSKVDHPVMSQHQQQPHQLSQQQQVQPSQQSSVVLQQHQAQLLQQNAIHLQQQQEHLQRQQSQPAQQLKAASSLHSVEQHKLKEQTSGGQVASQAQMLNQIFPPSSSQLQQLGLPKSPTHRQGLTGLPIAGSLQQPTLTQTSQVQQAAEYQQALLQSQQQQQQLQLQQLSQPEVQLQLLQKIQQQNMLSQLNPQHQSQLIQQLSQKSQEILQQQILQHQFGGSDSIGQLKQSPSQQAPLNHMTGSLTPQQLVRSHSALAESGDPSSSTAPSTSRISPINSLSRANQGSRNLTDMVATPQIDNLLQEIQSKPDNRIKNDIQSKETVPIHNRHPVSDQLDASSATSFCLDESPREGFSFPPVCLDNNVQVDPRDNFLIAENVDALMPDALLSRGMASGKGMCTLTSGQRDHRDVENELSSAAFSSQSFGVPDMSFKPGCSSDVAVTDAGMPSQGLWNNQTQRMRTFTKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGDDPWEEFVGCVKSIKILSAAEVQQMSLDGDLGGVPPQTQACSASDDANAWRG</aaseq>

Gene Sequence

<dnaseqindica>1..46#295..407#499..594#692..748#834..989#1091..1175#1416..1506#1585..1749#1839..2034#2282..2420#2876..4563#5264..5454#5539..5683#ATGAAGGATCAGGGATCATCCGGTGTGTCTCCCGCCCCAGGGGAAGGTGAGAAGAATCCTTTTGCTCTTTGCTCATGTGCTTGCTTCCTTTGCATTGTTCAGAAAAATTCAGGTCGTTTTGCTTGAGCATTTGCCGAATTCATGGCCATCATCGTTGCCGCAGCGCACATTTGCAGTGAAACCTTGCTCATGGCCTCCTCCTCCTCCCTATGAATCTTATCGCATTAGCGTGTGCTGTGTAGTGTGAGGTTGGATACACTGCTGTAACAACTGAGCATGGGTTTTGCAAAGCAGGGGAGAAGAAAGCCATCAATTCGGAGCTATGGCATGCTTGTGCCGGGCCTCTTGTGTCGCTGCCGCCGGTGGGCAGTCTCGTCGTGTACTTCCCTCAGGGTCATAGCGAGCAGGTGAACAATTTTGTCATCTTACTGTCTGAAATGTGCTGAATCGTGACAAGTTTCTGAAAATTTTCTTGTTTTCTGGTATGCCTTTGTTTAGGTTGCTGCTTCCATGCACAAGGAGCTGGACAACATCCCTGGTTATCCCTCTCTTCCGTCTAAGCTGATCTGCAAACTTCTGAGTCTCACCTTACATGTATGTGCATAGTACTTTCCACTTTGATGCTATAGTTGTGTTTTTCCTTTTTCATCTTTGCTAATTGGGTGCGCGCAACATGTTTTTTATTGTTCAGGCAGATTCTGAAACTGATGAAGTTTATGTTCAGATGACACTTCAACCAGTCAATAAAGTATGTAAGATGATGATCTATTTGATTATGGGAACACACTATTTATCTCCGTGAAATTGAAATATGTTTTCTGGATGTGTTTTAGTATGATCGAGATGCAATGCTGGCATCTGAACTGGGCCTGAAGCAAAACAAGCAACCAGCGGAGTTCTTTTGCAAAACGCTGACGGCGAGCGACACAAGTACCCATGGTGGATTTTCAGTGCCACGTCGTGCGGCGGAGAAGATATTTCCACCACTAGTATGCAGAGTTTCTTCATAACCCTTGCAGTAATTTTGATGGAACTATGCATTTATCAGATGCAGTGAATACCTGCCTTACCAGGATAACATGTTCGATAGGACTTTACCATGCAACCACCAGCACAAGAGCTCATCGCCAAGGATCTGCATGATATTTCATGGAAATTTCGACACATTTACCGAGGTATGCCAAACTGCTAACTGCTCAGAGAATATCTGTACATTGACTTGGTTTTATATTTATTTCATTGCCACATTTTTTTTGACAGACCCATTACTTACACTTAGTTAGCACTTTGCATCTAGTTTTCCTGCTTTTTCTTTGAACTGCTAAGGATGTCTCTGTCCTGGGACATGGTGGCCGATCAATCAATTGCATTCTGTACTTACCTGTATACTACTGTACCTTCACATGGACACGCAGGTCAACCAAAGAGGCACCTTCTGACAACTGGTTGGAGCGTCTTTGTCAGCACAAAAAGGCTTCTAGCTGGTGATTCAGTTCTGTTTATAAGGTAGCACACTGAAATTCAAGTGCATCGATTTGTCTAAATCGTTTCAAGAAATATTGATTCTACATCTTTTGTTTGCAGGGATGAGAAATCTCAGCTTCTATTAGGCATACGTCGTGCTACCAGACCCCAACCAGCTCTATCGTCATCAGTTCTATCAAGTGATAGCATGCACATTGGGATTCTAGCTGCTGCAGCACATGCTGCTGCAAACAGTAGCCCATTTACTATTTTCTACAATCCAAGGTATTATAGTTCTTACTTGATATCCCATTATCCCAATGCACTCTCTGCTACCCTTTGGGACTATGAACTCATTGTTGTTATTCTGATAGGGCAAGTCCATCAGAATTTGTCATTCCTTTAGCGAAATATAACAAGGCTTTGTATACACAAGTATCTCTTGGAATGCGGTTCAGAATGCTGTTTGAGACAGAGGATTCAGGGGTTCGAAGATATATGGGAACAATCACAGGTATTGGTGACTTGGATCCAGTGCGCTGGAAGAACTCTCATTGGCGAAACCTTCAGGTGTGCTACTCTTTTCTTCTTTTAGTTCTGCAATGTGTCACATTCATACATCTCATTCTCATCTATGATCTGTAAGAAATAACAAAATATCTGGATTAATTATTTGTATTAAATTAGAAAATTCAACCTCATTTTGAAGAAATCTTTGAAATAAGATTGCCTAACACCCTATAGAATTGTTGTTTGCAAGTTTGTTTAGCATATTATACAAAACCTTCCCTGACTTCACCTCCTCTTTCTAAGTTAGGTTGGTTGGGATGAATCAACAGCATCTGAGAGGCGCACTCGTGTTTCAATATGGGAGATTGAACCAGTCGCGACACCTTTTTATATTTGTCCACCACCATTTTTCAGGCCAAAACTTCCTAAGCAGCCAGGAATGCCAGGTACAGATACTTCCACTCAACATTATATATATATTAGCTAGTATTACTATTTAGGGAATAGTGTAATATGCAGATCATTTTGATCTTTGGGAATTAGTGCTTCAATCATACAGTCATTCTCTTCTTGCTGAACTCATTAAGCTTGTAAAGAACACTGCAACCTAATTTTCACCAACGTGCATACGCATTATACTAAAAATGGTTTGCTTCTTGCATGCATATGAACTTGATGCATCTGTTAACAGCAAGAGGTTCTAGCCAAAGCACATAAACACACTTCAATTCTCTTAAATGTAGTTGCTTCTTGATTGTGTATAAACTTGAAATATTAATAATCAGCAAGAACTGTGGATTTGTTGTTTGTTACCTGTGTACAAGTTAACTTCCTTGCAAATTTTGCTTGCATTTTCTTAAGATTTGTTTGGTCCTCATATGAAAATTGCTAAAACTTGCAGATGATGAAAATGAAGTTGAGAGTGCTTTCAAAAGAGCCATGCCATGGCTTGCTGATGACTTTGCCCTGAAAGATGTGCAAAGTGCATTATTTCCAGGTCTGAGCCTAGTCCAATGGATGGCTATGCAACAGAATCCTCAGATGCTAACAGCTGCGTCCCAAACAGTGCAATCACCGTACTTGAACTCCAATGCATTGGCTATGCAGGATGTGATGGGTAGTAGCAACGAGGACCCAACAAAAAGATTGAACACACAGGCACAAAATATGGTTTTACCTAATTTACAGGTTGGCTCAAAAGTGGATCACCCTGTAATGTCTCAACATCAACAGCAGCCACACCAACTATCACAACAGCAGCAGGTCCAGCCATCGCAGCAAAGTTCTGTGGTTTTACAGCAACATCAAGCCCAGTTGCTGCAGCAGAACGCCATTCACTTGCAGCAGCAGCAAGAACATCTCCAGCGGCAGCAGTCACAACCGGCACAGCAGTTGAAGGCTGCTTCAAGTCTGCATTCAGTGGAACAGCACAAGCTGAAAGAACAGACTTCAGGTGGGCAGGTTGCCTCACAAGCACAAATGTTAAACCAGATTTTCCCACCATCTTCATCGCAGCTACAACAGTTAGGTTTACCCAAGTCACCTACTCATCGCCAAGGGTTGACAGGATTACCAATTGCAGGTTCTTTGCAGCAGCCCACACTAACTCAGACATCTCAAGTCCAGCAAGCAGCCGAATATCAGCAGGCCCTCCTACAGAGTCAGCAACAGCAACAGCAACTGCAACTGCAACAACTATCACAACCAGAAGTACAGCTGCAGCTGCTTCAAAAGATTCAACAACAAAACATGCTATCTCAGCTGAACCCACAACATCAGTCCCAGTTGATTCAACAATTGTCTCAGAAAAGCCAGGAAATTCTACAGCAACAAATTTTGCAACATCAATTTGGTGGGTCTGATTCTATTGGTCAACTCAAGCAATCACCGTCGCAGCAAGCTCCTTTAAACCACATGACAGGATCTTTGACGCCCCAGCAACTTGTCAGATCACATTCGGCACTTGCTGAGAGTGGGGATCCATCCAGTTCAACTGCTCCATCCACCAGCCGTATTTCTCCAATAAATTCGCTGAGTAGGGCAAACCAAGGAAGCAGAAATTTAACTGACATGGTGGCAACACCACAAATTGACAACTTACTTCAGGAAATTCAAAGCAAGCCAGATAATCGAATTAAGAATGACATACAGAGCAAAGAAACAGTCCCTATACATAACCGACATCCAGTTTCTGATCAACTTGATGCATCATCTGCTACCTCCTTTTGTTTAGACGAGAGCCCACGAGAAGGTTTTTCCTTCCCTCCAGTTTGTTTGGATAACAATGTTCAAGTTGATCCAAGAGATAACTTTCTTATTGCGGAAAATGTGGACGCATTGATGCCAGATGCCCTGTTGTCAAGAGGTATGGCTTCAGGAAAGGGCATGTGCACTCTGACTTCTGGACAAAGGGATCACAGGGATGTCGAGAATGAGCTATCATCTGCTGCATTCAGTTCCCAGTCATTTGGTGTGCCTGACATGTCCTTTAAGCCTGGATGTTCAAGTGACGTTGCTGTTACTGATGCCGGAATGCCAAGCCAAGGTTTGTGGAATAATCAAACACAACGGATGAGAACTTTCACTAAGGTTGGTACAGTTCTTTTGAGGACACATTTATTCTGGACCTACATTTGTCTGCGATCTTTCAAAATTGTGAAAATGCACATATCAAAAGCTACCTTATTGGGTGCATACATGTCTAGCTTGAGAAAGTTTTGCTTGATTCAAGATCAGAGGGCTAAGTTAGAAAACCTGAATTGTTCTTGTTAGTAATCAATTAATCACTAAGTTAGATATCGCCTGCATCTTTTTTTTGTGAACTATCAACGTCGTTGAATAGGACCAATGAATTTTCGGATACATGTGTCATTCTATCGTTTGTGATTTAAAAAATTGACAACCAATTTGAACATGACAAGTGGGCCCTGACCCACAGATGAGCGTGGCATTGACTAGCATTTCTCAGACACAAACTATAGGGTAACATGTAGCTAGATGACCCACCAATGATTCCTGACATCAGTTGGCACATACTAATAATGTAACTCCAGAAATGTTAAACGTTGTTTGTGATATTTTTGCTGCCTTTCATGTCTATGTTGGTCATGTTTTTTGGGGGAACATATGTTGGTCAGGTTTAGCGAGAACTAAACATCCTGCATTCCTGCTCATGTTCTGGAGCATCATCATTTATTCCAAATTTCTATGCCAAACAATGGCTTAACGATCCAACTATTATCCTTTATTCTCAAACTGTCCTCTTATGTGGCAAACTATCTTCATGAAGGTTCAAAAGCGTGGTTCTGTGGGGAGATCAATTGATATCACAAGATATCGAGATTATGATGAACTTAGGCATGATCTTGCATGCATGTTTGGTATCCAAGGTCAACTTGAAGATCCATATAGGATGGATTGGAAGCTAGTCTATGTTGATCATGAGAATGATATCCTTCTTGTCGGCGACGACCCTTGGGAGTAAGTGCTTCCCTTCCCTCCTCTTGGATCCAATACAATTCTATAGCTAGCCCCTCCTGATGATTTAGAAAACTTGATATGCAGGGAATTTGTGGGCTGTGTGAAGAGCATCAAAATACTCTCAGCTGCTGAAGTACAACAGATGAGCTTGGATGGTGACCTTGGTGGCGTCCCTCCACAAACACAGGCCTGTAGTGCCTCTGATGATGCAAATGCATGGAGAGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022468

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022468&oldid=44993"