BGIOSGA022469

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Revision as of 13:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022469| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022469, complete gene.| tag = OsI_220...")
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Gene Name

BGIOSGA022469

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022469, complete gene.

LocusTag

OsI_22016

Ensembl Transcript ID

BGIOSGA022469-TA

Ensembl Protein ID

BGIOSGA022469-PA

Length

3734

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5552082..5555815

Sequence Coding Region

5552082..5552252,5552353..5552532,5553866..5554021,5554181..5554258,5554562..5554636
,5555642..5555815

Genome Context

<gbrowseImage1> name=IndicaChromosome06:5552082..5555815 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:5552082..5555815 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGGTGCAGCTCTCCGGTGCCGGAGTCGCCGCGGTGGCCTTCACCAAGAATGGCGCGTCTTCCTTCGACGGGCTCCGCCTCGCGCCGCCATCTGTGCGAGTCTGCTCCTCCAGGCGCCCGTCTCGTAGCCTCGTCGTCAAGGCCGCCACGGTCGTCACCCCAAAGTATACCTCGCTCAAGCCTCTGGGAGACAGAGTGCTTGTGAAGCTTGGTGCTGCAGAGGAGAAGACTGTTGGTGGGATTCTGCTTCCGTCAACCGCACAGTCTAAGCCTCAGGGAGGTGAGGTTGTTGCTGTTGGAGAGGGAAGAACTATTGGGGATAAGAAAGTTGAGGTCAGCTTGCAGATTGGGGCTGAAGTTGTATATTCAAAATATGCTGGGACTGAGGTGCAATTTAACGACACCAAACATCTTATTCTAAAAGAGGATGATATCATTGGTGTTCTTGAGACTGATGATGTCAAAGATATGAAGCCCCTTAATGACCGGGTTCTCATCAAGGTTGCTGAGGCTGAAGACAAAACTGCTGGTGGCCTTATTCTCACTGAAACCACTAAGGAGAAGCCATCAATCGGAACAGGGATCGATCCAGTTCATGGGAGGAAAGAGGACGAGTGCGGCGAGGTAGTCTGCGTGGCCAAAATGGAGGAGGCGGTTGTAGCCGTTGGTCCAGGCCCTCTTGATGATGAAGGCAAGAGGCAGCCATTGTCAGTTTCAGCGGGCAGCACTGTGATGTACTCCAAGTACGCAGGCAGTGAGTTCAAGGGAGCTGATGGCACCAACTACATTGTCTTGAGAGTATCAGATGTGATGGCTGTCCTATCTTGA</cdnaseq>

Protein Sequence

<aaseq>MSSVQLSGAGVAAVAFTKNGASSFDGLRLAPPSVRVCSSRRPSRSLVVKAATVVTPKYTSLKPLGDRVLVKLGAAEEKTVGGILLPSTAQSKPQGGEVVAVGEGRTIGDKKVEVSLQIGAEVVYSKYAGTEVQFNDTKHLILKEDDIIGVLETDDVKDMKPLNDRVLIKVAEAEDKTAGGLILTETTKEKPSIGTGIDPVHGRKEDECGEVVCVAKMEEAVVAVGPGPLDDEGKRQPLSVSAGSTVMYSKYAGSEFKGADGTNYIVLRVSDVMAVLS</aaseq>

Gene Sequence

<dnaseqindica>1..171#272..451#1785..1940#2100..2177#2481..2555#3561..3734#ATGTCGTCGGTGCAGCTCTCCGGTGCCGGAGTCGCCGCGGTGGCCTTCACCAAGAATGGCGCGTCTTCCTTCGACGGGCTCCGCCTCGCGCCGCCATCTGTGCGAGTCTGCTCCTCCAGGCGCCCGTCTCGTAGCCTCGTCGTCAAGGCCGCCACGGTCGTCACCCCAAAGGTATACAGAGGTGTTAAGCTTCCCAATTATCTGTAGATTATGGCGAGCTTGGTTATGGTTAGCATGAGTGAGTTAACGAATTTCGTTGTTCGCATGGCAGTATACCTCGCTCAAGCCTCTGGGAGACAGAGTGCTTGTGAAGCTTGGTGCTGCAGAGGAGAAGACTGTTGGTGGGATTCTGCTTCCGTCAACCGCACAGTCTAAGCCTCAGGGAGGTGAGGTTGTTGCTGTTGGAGAGGGAAGAACTATTGGGGATAAGAAAGTTGAGGTCAGCTTGCAGGTAAAGTTCTTCTCACAATGAGATTGCAAGTGTACCTGTATGATGTCTAGTACTACATTTCTTACCCCATAGCTCGGTTGTGAGTTGCAAGTAGCAGTGACACGGCAATTTACTTGTTGGTTGTTGCCAACTAAATTTAAAAGCATATTGTGTGTGATGCCTTATCAAGAATGCGATGTTAATGGTGTACGGGGTCTGTGAGGCTGAAGTTTCTATGGCACAAAACTCATGTGAAACCAACAGAGGTTTCTCATGATTGCTTTATGACTGTTGTTCAGAGTATGCAACACTGATATATTTTGATTGTTAGTTTCTGGTTTGGTTAAACATATGAATCCACGTAAGGAGTATCCTTTGGCAATGGGCAAATATGTATGAGCATTTGCTTAATTTTGTCATCCATACAAATAGATGTTGTTAGTCTTTCATAGCACTAGGAGAGTAGGAGGTGGTGCATATGACCCGGGTTTGAGAAACAACAGAAAACCGGGAAAAAAGAATCGCTCAACCCTTTTTTTTTAAAGGACTGGTTCACTCCCTCATGTTGGTATTACTAGCAACTTCCATGGAGAACATTTATTTAGTTAGTGCCTGGTTTACAAGTCCAAACCCATGATGTTTTGGCATCTCCATCCCTCAACTAGATTCACTAATGTACATATGAATTTGGACACATATATGAAGCACATACATGAATCTATTCAAAACTCAAAACGTCTTATAATGTGAAACAAAGAAAGTAACTAGGTAAAGCGGCTTCTGAGGTAATGCTGTGTGACTTGTTTGTTTATAGTTATCTTGTTGAACAGGGTACAATTTGTTCTGACTGATGGGCGAAAAAGGCTTTCAATCTCTGTTTTTTTTTCTTAGATGCACCTTGCAACTTTATCTTGGTTCCTGCATGACAATAATTGTTTGGGTTCATCATCTTGTCTACTGGAAATGTCTCTAAGATAAGGTTTAGATTGGTGAAAAATTTACTGATAGTGATGCTTGTTACAGGACCTTAGATTGGTGAAAAATTTACTGATAGTGACTCTTGTTACAGGACCTTGGTTATTTTCATTTGTTGTGTAACTAGTTTTCACTTAACTTGAATTTCTGCAAGGAGATACTACATTAGTAAACTTAATTTAGACAATCATAGCGATTGGCACTACAGAGAGCCTACTGTTGAATTTCAGTGCAGCAATTGTGCTATATATTACCTGATGAACTTGGTGCAATAAGATGTTAAAGTGCCAATCTGCCAATTTGTTCTGTTGCTTTTATGTTGTGGTTTACTGCTTATGCCTTCTAATGGCAGTATTAAGTGATTTATATTGTTCTGTAGATTGGGGCTGAAGTTGTATATTCAAAATATGCTGGGACTGAGGTGCAATTTAACGACACCAAACATCTTATTCTAAAAGAGGATGATATCATTGGTGTTCTTGAGACTGATGATGTCAAAGATATGAAGCCCCTTAATGACCGGGTTCTCATCAAGGTATCCATATGTTATTGTTATTGCTTCTTAAGATAGTTGCCAGTAGGGTTATGGTTTATAGGTAATGAAATTGGAGAATGTTGAATAAATTGTACATCTTGCCGTTGTACTTCCTAGACAACCTTTGGTAATGATTCCCTGCTTTTGTAAATTTGACAGGTTGCTGAGGCTGAAGACAAAACTGCTGGTGGCCTTATTCTCACTGAAACCACTAAGGAGAAGCCATCAATCGGAACAGTAAGTTCTTACCATTGTCTCTTTAAGCCTTGTTATTGTTATTCTATTGCTGTGAACCTAGATTGTTGGGCTATATGCAAAGATTTGTGCATGTACTGAGCCAAGCGAGAAAATGGACATTTAGCCACTTTCAAGAAGTGGTTTCGCTGAAATGCCATTCCGAAAACGCGTTTCGCTAAAATGCCAATATGTAGCGTGCACTCACCGCCACTTGCCATTTTGGCCATTTTGTGCATTTTCAATTGCATTTTCGCTGGAATGTGGCTTGATGGGACCAAATTGCCCTTGCTCGCCGGTTGAAAGGGGATCGATCCAGTTCATGGGAGGAAAGAGGACGAGTGCGGCGAGGTAGTCTGCGTGGCCAAAATGGAGGAGGCGGTGAGCGAACGCATGGCGGCGGCGGTGATGACGGCGACACGGGCATGGCGACGCCGCAGCGAAGGGAGACGCACGGCCTCCACGCCGTCGCGGACGACGCCCTGTCCGCTGACGAAGAAGCTGACGACAGACGGCCATGACCATCTCCAGGATGCCGAACCCCCACCCTCACCAGCGCGCCGATGTCGATGGCCAGGATGCTTGACGAGGTGGAGGTGAGGTCGTCGAGGTGGAGGACCCGACGACGCTTGTAGACGAAGCGGCGGCGGCAGCGGCGGCGTCCTCGAGGTCGAGCGAGTGGAGGACCTGGCAGCGCTTGTAGACGAAGCGGCGGCAGCAGCGTCCTCGAGGTCGGGCGGGTGGAGGACCCGGCGGCGCTTGTAGACGAAGCCGTTGCAGTTGCAGATCTCCCAGTCCTCGTTGCCGTCGCCGCCGGCGGTGGAGGCGTACTAAAATCCATGCGCTCTCTCTCCTCTCTACTCTCTCTTTTTCGCTGAGATTGATTTCGCTTGCTGTGGCGGCTGGGCTCTGATCCGTCGATCCGTGCGCTCGCCAGAGGAGGAGGAGGATTTGGGGTGTGTGTGTGTGCACGGCGGTGGCGCGCGGCGGGATGATGCTGGCGGGGCACAAGTTCAGGAAGGGGAAGAAGGCGGTGGAGGAGGAGGTGAACGGGTTCTTCATGGAGGAGGAGGAGGAGGTAGCGGTGTCGGACGCGTCGTCGATCGGGATGGCATCGTCGGACAGCTCGACGGGAGAAATCGTCGTCGGAGAAGGAGGGGCATTCTCGTCTCTTCAAGCCGCTTCCCAGAGAAAATGATATCCAAAATGGTGAAAATGGCAAAGTAGCTGTGATGGCGCACTCCATATTAGCATTTTAGCGAAACACGTTTTCGGGATGGTATTCCAGTGAAACCATGTTTTCAAAGTGGCAAAATGTCCATTTTCTCCAGCCAAGCTGAACTGAATTTGCATGAGTTTTACCTGTTTATTACCTTCTGAATGCAGGTTGTAGCCGTTGGTCCAGGCCCTCTTGATGATGAAGGCAAGAGGCAGCCATTGTCAGTTTCAGCGGGCAGCACTGTGATGTACTCCAAGTACGCAGGCAGTGAGTTCAAGGGAGCTGATGGCACCAACTACATTGTCTTGAGAGTATCAGATGTGATGGCTGTCCTATCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022469