Os11g0602300

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Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0602300| Description = Similar to HVA22-like protein a (AtHVA22a)| Version = NM_001074762.1 GI:115486172 GeneID:4350866| Length = 4398 bp| ...")
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Gene Name

Os11g0602300

Description

Similar to HVA22-like protein a (AtHVA22a)

Version

NM_001074762.1 GI:115486172 GeneID:4350866

Length

4398 bp

Definition

Oryza sativa Japonica Group Os11g0602300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25014483..25018880

Sequence Coding Region

25014730..25014785,25016318..25016344,25016443..25016565,25017442..25017685,25018062..25018556

Expression

GEO Profiles:Os11g0602300

Genome Context

<gbrowseImage1> name=NC_008404:25014483..25018880 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25014483..25018880 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtccggatctttgctcaaggttcttgccaagaacttcgatgttcttgctgggcctttggttgcactagcttatccgttgtacgcttcagttaaggcaatagaaaccaaatcccctgtggatgatcaacaatggctcacatactgggtgatgtactcattaataacactgtttgagctcacatttgcatcaattattcagtggcttcctttttggccatctatgaaattgatctttatttgctggcttgtcttgccatacttcaatggtgcagcctttgtgtaccaaaattatgtgagacctatgtttgtgaagcaccaaatggttaacatttggtatgtccctcagaaaaagggccttttcggtaaatccgatgacttcctcacagcacttgataaatttattgaagaaaatggacctgaagctctgaagaaactgactaacaaggctggcaaatcatctaaacagtctggcaaatcatggaaagattcaaagtcatcaaaggagtcaaaagattcgaagtcatcaaaggaatccaaagaaccaaaaccatcgaaagattcaaagcaactgaagccaccaaaagtttcgaaagagtcaaagccattgaaggactcgaaagaagacaagaaggcagtgaaagaagataagaaggcggctgcgaaagattcgaaagaacagaagaaggcactgaaggactcgaaagaactaaaaaaggcgttgaaggactcgaaagaacaggggtcgcagaaggattcagatgaacttaaaccaaagagcaacaagcgcgtgacgttcgccgaggtggagcccgagaaggaactcaaggcctccaacagcgactggcatccgacctccgagtatcacagcgtgtacccggagcacaactcatggagcagcagcttcatgatctttgaggatgagaacagttactggaactag</cdnaseq>

Protein Sequence

<aaseq>MGSGSLLKVLAKNFDVLAGPLVALAYPLYASVKAIETKSPVDDQ QWLTYWVMYSLITLFELTFASIIQWLPFWPSMKLIFICWLVLPYFNGAAFVYQNYVRP MFVKHQMVNIWYVPQKKGLFGKSDDFLTALDKFIEENGPEALKKLTNKAGKSSKQSGK SWKDSKSSKESKDSKSSKESKEPKPSKDSKQLKPPKVSKESKPLKDSKEDKKAVKEDK KAAAKDSKEQKKALKDSKELKKALKDSKEQGSQKDSDELKPKSNKRVTFAEVEPEKEL KASNSDWHPTSEYHSVYPEHNSWSSSFMIFEDENSYWN</aaseq>

Gene Sequence

<dnaseqindica>248..303#1836..1862#1961..2083#2960..3203#3580..4074#accatccaccaccaccacgctacgctttcctcctccccctccactccagattttgctcccctcgagaccaccaccaaaagcagcagcaccaccgaaagaggaagcaaagcaaagcaaagcaggcgaggtttcagtctcccaggaatccccttccaagaactcccacccgattcgaagcgctcgaggaggttctttgctcaatcagagtggatcttctgctgggaggattgggaagagcgggggagagatggggtccggatctttgctcaaggttcttgccaagaacttcgatgttcttgctgggtcagtcagtcgcaccgccctgccttcgctctccccccccccccccaaattaattttcggttctttgttttttggttcatctctttaccgttttgttctttcctttcggaatggcgatgattttagcagcaatgggtggattcttagtgatgtgtttgctcgtccggttcaatgtagcattgcggtagctgttcttgattcttgtggtccgtgaggtgctgagggtgttcttttttcccccccgctggttgcggcttggaatcgagtaatgttggtttcgaagagtagtacaatgcttaaatttttcagtggatatttcaggatcggaaatgttcttgcttttcttgatgtaactggcgatttcatttgaaagaaatagaaataaacacttccttcctagtagattagtaggagtacatttttttcctttttattaacctgcgaaggcttgttcttcctgaaagaatcgatcttctattgcagtctaacatcgaggatttcttcttgtttattctgctggaggaaaggcgtttgatttttcgtttatctgtcaccaaatcctcgcttttgtagatttttatgttgttgttgggtgcgtttactgttttggacttcgaaacgtcaatttcttatcccaatcttgacacaagaacatatccgttgatgctgacattgcaacccgcacctttcccgaatgcttatgcgacatcaaaaatctaaaatttgcctgtgatgcacgtgctgtgggctgctctgctgtagatcaccaagtctgcaatctgaacatgtagatcagatgtggagtttttgtcacttcaatctgctagtgcggtgtatctttctactgcatcctgacctcttcacagtcttttagaaaaagctagtattgctttccgatttgtagttttgctagtggtagtggagcaattgtagggtagttcgacctttcggcatttccactttcaatactagtttgtttgttttctttgtccaattatcttttccattagctgtttctcattcctttctatgcagtatgtaagaggtcacatgcaggagaatgggtgtgattgaataatctgctgctgtttctttattatttggtagattgtcattcatgtctcgtagcgatcatggtgcataaagaaacaagtgccagttttgggcactgtgatttctttaattccaagtgtggaccgatgcatgctgtagaaatgcacactaccttcctctaatcgatgtcatgttttagtatgctatgttggattagaaaatatggacatccctttagctgctgcgtaatttgtaaaagtaatataagaaatgatgtggttaattttatactgacttactgacttgtcaaggggtgcttttctactatgttagagaccatctaatactacctgttttatcctgaatttagaaccgttccacctttaatttcctggctagcttggatgctactatgaatatgttgttaatgctttgactttaccttcagcttaacactttttttttaatctctcatgcaggcctttggttgcactagcttatccgttgtaagttgtttgttgcttttatcctgtttcaacatattcatgtttttttaaagttaatttgtaatggtaaacacaaatgtaactcgatgctattacaggtacgcttcagttaaggcaatagaaaccaaatcccctgtggatgatcaacaatggctcacatactgggtgatgtactcattaataacactgtttgagctcacatttgcatcaattattcagtggtaagtactcttgtgatatttgtggtctttttaatgtaaaaaaactttgtactagtagttttagagttatttattgttttagtctgaactattggtgacaaatccctgatctttgaactagtgggatgtgcatacctgcattgccattttcacactatgtagtatcaacattctgacaatcgttagagcaagacacgtgtgcatatgtcaccaaagttcctgggtccatgggttgaggaatgggatcaaggagcgtgggacgtttctttcaaaaggttttaacagcgcaggggcaagattgtccatgtgttcccaggatgggaacaacatcctcgaaggaacgcaatatagttccacggtcctgattacttgtgtgctttgtttagttaacaggacacaagtacagagcatttcatttctgggcaggtaaagacacagtgttccttaaatcagggtttcaaacataaatgattaatcattcttggaaacaaattatagcagtagaaactatatccaataccattctacatagaactgactactgatctactttcacttgtaagagtccctcttcataaaagtttttttaaaaagaggataattacaaatgttccacagttctgttgttttatccctgccattgcagtgtgatgaaaggtttgtagggtttggaataatacacccatgttatttttttaattgcatactttatttggatggtgattacaacataatgttaaggaagagagacctattaattcgtacttgctctagtccttctctgagtcttttccattggcttggacaaatttacagttagtcatcatggtacactgacttgctgttccattgtctttccatcttctgtttctacaggcttcctttttggccatctatgaaattgatctttatttgctggcttgtcttgccatacttcaatggtgcagcctttgtgtaccaaaattatgtgagacctatgtttgtgaagcaccaaatggttaacatttggtatgtccctcagaaaaagggccttttcggtaaatccgatgacttcctcacagcacttgataaatttattgaagaaaatggacctgaagctctgaagaaactgactaacaaggtatattggtctaaatttagttaagtatatcccaacttcatgcactattgcactatacaattgtgaaaaatgctctatataacactagtctgtgtgccctttcatgttgtatgtagttagctatgatcctgaagtcatggtgttctctgtatagatatgatgacagcattttgatatttgaatatgcttaccttgacctaaggctgcagcttgatggtccacatttcatcagttactgattaagcaatgctttttttccacctcaattttgagttgttaccgtgaacatgttgctattgcttttaaaagtttcacaacccatgtcattttgagaataagtgacaaattcattattatctgtggtgttgtctttcaggctggcaaatcatctaaacagtctggcaaatcatggaaagattcaaagtcatcaaaggagtcaaaagattcgaagtcatcaaaggaatccaaagaaccaaaaccatcgaaagattcaaagcaactgaagccaccaaaagtttcgaaagagtcaaagccattgaaggactcgaaagaagacaagaaggcagtgaaagaagataagaaggcggctgcgaaagattcgaaagaacagaagaaggcactgaaggactcgaaagaactaaaaaaggcgttgaaggactcgaaagaacaggggtcgcagaaggattcagatgaacttaaaccaaagagcaacaagcgcgtgacgttcgccgaggtggagcccgagaaggaactcaaggcctccaacagcgactggcatccgacctccgagtatcacagcgtgtacccggagcacaactcatggagcagcagcttcatgatctttgaggatgagaacagttactggaactagagatctctagacctgtaagccctgaactcacctcatccatttttcaatattgatcatgtcaactagacttgatgtgttgatcagttgcatttcttgtgcaggccaaaaaaaaaaagcagcccggtgaagagtcttcagttagttagaagtagctaggaggccatttaaactctcttgttctagctgtcctctatcgattgttctgacttgggtcaccatgtaacatatttctctaatttacaccagtagatgatgagtaatgtagaaatctgcaatgtgggttggtgatgaaaatggtgatgctggtagaattcagattatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0602300, RefSeq:Os11g0602300