Os11g0602400

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Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0602400| Description = contains InterPro domain(s): IPR006677, IPR006678| Version = NM_001074763.1 GI:115486174 GeneID:4350867| Length = 21...")
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Gene Name

Os11g0602400

Description

contains InterPro domain(s): IPR006677, IPR006678

Version

NM_001074763.1 GI:115486174 GeneID:4350867

Length

2183 bp

Definition

Oryza sativa Japonica Group Os11g0602400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25019148..25021330

Sequence Coding Region

25020389..25021267

Expression

GEO Profiles:Os11g0602400

Genome Context

<gbrowseImage1> name=NC_008404:25019148..25021330 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25019148..25021330 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatttgccaggtccaagatggaagaagggcaacgatggcaaggacttctcagcactagcagcagctaatcccatgtcagtcattgttgctgagctcaaggcctcattcataagctcaaagcctgtggcagttttgtcaggtccaggtggcggtgccattcttggagttgagccagagcaagccgtgatcctaaaccgtgctgcctttggccacgccgtcgaaattgctgcggcacagaagcactggttccaacttagccctgaggaggtcttctacctctgccatgttctgaactgcatcagggttgagtcacacgacaagaagcagatgagtgataagcaactgtggaatcacttcaggtccatgtcggagtcctttccagagatgtacaaggcttactcgcatctgagatttaagaactgggtggtgagatcagggttgcagtatggtgcagattttgtgtcttaccgtcaccatccagcactcgttcactcagaatttgcggtggttgtggttccagaaggcgcagcgtttggcaataggtgtggtcgtatggaggtgtggtctgatctactatgtgctctccgggcttctggcagtgtagccaagacattgcttgttctgaccatcagcagcggcagttgcgaactgagctccccagattgcttagaacagcttgttgttcacgagagaacaatcactagatggataccgcaacagtgccgtgaacagcggtctgaagcaagcagagatgaagccaatagggaagaactgattagcaaaaaggaaagtgtagagttcaacctctggggtgtgatacttggcttcagtgttctatctagcttgcttgtatacaagctgaaattcagacaatga</cdnaseq>

Protein Sequence

<aaseq>MDLPGPRWKKGNDGKDFSALAAANPMSVIVAELKASFISSKPVA VLSGPGGGAILGVEPEQAVILNRAAFGHAVEIAAAQKHWFQLSPEEVFYLCHVLNCIR VESHDKKQMSDKQLWNHFRSMSESFPEMYKAYSHLRFKNWVVRSGLQYGADFVSYRHH PALVHSEFAVVVVPEGAAFGNRCGRMEVWSDLLCALRASGSVAKTLLVLTISSGSCEL SSPDCLEQLVVHERTITRWIPQQCREQRSEASRDEANREELISKKESVEFNLWGVILG FSVLSSLLVYKLKFRQ</aaseq>

Gene Sequence

<dnaseqindica>1242..2120#aaatcaatccgcggtggcggcggcggcggcggcggcggcggtggtccacgtcagcttctactgcaattttaggtaccttctcccccatctccctctcgtcggagaacggcggtttagttagcttcttcgtcgtcgccgtcttgattggtgcttcgatttggcgcagcgatagatttagattttttttttccttttcccaatctccccgtagttgcttcggtgtgtttgtcgatgcatacggcatacgcatcttactgtcgaaatacgtacgggttctgcacaaccgagtctgaggtcatacgaaccctgatttctcatcattctctagttgaaactttgtgtggtgtagtgcgtttcaagttcggagatgtgtagaggcttatttaggacggtttgggtgataatatagattgctaatatatgttctttttgtatcgaggaatgaaggcaggttgctcttttggcatttgatcctatggagcttgaaatgtttgcactagtagaggtaggggtgatcatgtcccctcctctgttcatggttagggttcatgccatcttcttctatagcgtttggttgtataggtaggttacaccgaaatgttcagcttcattgcctgaatttcagcttgaatacaagcagctgcatagaacactgaagcctagtattacacacaccccagtggttgaataataactagtacgccttttctttttgctggtcagttcttcccatgtaaggtttggaccattgttcatggcactgctgtggtatctatctcgtgattgttctcaattatttggaaatgaccagattttagaaactttttccgtttgtgaatttcaaaagctcgtgacgagtctattgttttgtttcattttagaagtcattcagcctttactgtcctttccttttcttttcgccagaagagcaatcctcaattcctaacccttagcgcagtggacaagtctgcaagttgttgtcgggccttcggtccatttccctttctctttcaacccgtgaggccataacttaatgcatagttgtttggcagattatttatgtatctatgctttacaaattaacatgttcgataaattagtgatgcatgtagtgaatcttcctttcttgaggtatttgtttggacaactttgtttacttgttgctttattgtcgttgctattcactacagcatttgaccacgcatcaattttagtccatcctctgcgagtgggttcagcatatggatttgccaggtccaagatggaagaagggcaacgatggcaaggacttctcagcactagcagcagctaatcccatgtcagtcattgttgctgagctcaaggcctcattcataagctcaaagcctgtggcagttttgtcaggtccaggtggcggtgccattcttggagttgagccagagcaagccgtgatcctaaaccgtgctgcctttggccacgccgtcgaaattgctgcggcacagaagcactggttccaacttagccctgaggaggtcttctacctctgccatgttctgaactgcatcagggttgagtcacacgacaagaagcagatgagtgataagcaactgtggaatcacttcaggtccatgtcggagtcctttccagagatgtacaaggcttactcgcatctgagatttaagaactgggtggtgagatcagggttgcagtatggtgcagattttgtgtcttaccgtcaccatccagcactcgttcactcagaatttgcggtggttgtggttccagaaggcgcagcgtttggcaataggtgtggtcgtatggaggtgtggtctgatctactatgtgctctccgggcttctggcagtgtagccaagacattgcttgttctgaccatcagcagcggcagttgcgaactgagctccccagattgcttagaacagcttgttgttcacgagagaacaatcactagatggataccgcaacagtgccgtgaacagcggtctgaagcaagcagagatgaagccaatagggaagaactgattagcaaaaaggaaagtgtagagttcaacctctggggtgtgatacttggcttcagtgttctatctagcttgcttgtatacaagctgaaattcagacaatgaagcttagcatttctatgtactgcggagatactagttttgatccagttgcaatttcaaatcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0602400, RefSeq:Os11g0602400