BGIOSGA022510

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Revision as of 13:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022510| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022510, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA022510

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022510, complete gene.

LocusTag

OSJNBB0015B15.30

Ensembl Transcript ID

BGIOSGA022510-TA

Ensembl Protein ID

BGIOSGA022510-PA

Length

7028

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6190012..6197039

Sequence Coding Region

6190012..6190198,6190832..6190875,6191494..6191641,6191726..6191834,6192786..6193300
,6194008..6194326,6194733..6194997,6195177..6195281,6195387..6195485
,6195999..6196457,6196704..6197039

Genome Context

<gbrowseImage1> name=IndicaChromosome06:6190012..6197039 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:6190012..6197039 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGCGGGGGCAGGGCTGGCACCGAGAAGGGGGCGGCGGCGGGGCGCGGGCAGACGGCGATCCAGTCCACCATCCAGTCTATCAAGGAGGTCGTCGGCGGCCACTCCGACGCCGACATCTACGCCGCCCTCCGCGAGTGCAACATGGACCCCAACGAGACCACGCAGAAGCTCCTCAACCAAGATCCATTTCATGAAGTGAAAAGAAAAAGGGACAAGAAAAGAGAGAGTGCTGGACAGAAAACTGTTCCTGATGCTTCTGCACAAGCTGAGCACAACTCACAGTGGACGAAGCCACGCACACAAAGGGTTGAGAATGACCAAAGAAGAGCTTACAGCCATGGTCAGGCATCTGGTAACACAGCTGAATCTCATGGTCCTAATCGGGAATTTCGGGTTGTGAGAGACAGCAGGCATGGTGTGGTTGAAAACAGACCAGAGCTAGGACACAAAGGTTCACCAAATGTAAAAGTGTCTGATAGGAGTGTGCCTGTAGTTCAAACCGGTCGGAACCATCCTCCTGCTACAACTTCAGAAGGCCAGATAACACAAGGTGCGAAGCACAGCTACAACTCTGACGTGCATCAAGTGAAGAGACAGGCTCAGGGCACTGCTCAGAAATATGTGAAGCCACATTTGAAGAACTCCCAGGATGAGCAACACCCTCCTACTTCTGATCCAGCTCACACCCGACCAAATTTGAAAGCTGCTGAAGGTGCTGTTGGATCCGTTCGACGCCATGTTGGAGTAGTTAATGTGCAAAGGCAACCATCTGGCCGCTCAAGTTCTCACTTGCATGTACAAAGTGGTGGTTCTCACGTAAATAATCAGCGGGGAAACTTTGTCCCAGGTGGACCATCTGGACGCCATTTTATGTCTAAAAACATGCAGTCCGTTCATAGAACTGCTTTAGATTCAGTACATCGTGGCAGATCTGGTGGCAGATCTTTTGTTGCCTCTAGTAGTAAATATCAGCAGGGTCCTGCCAGCAACCAGAAAGTCACACAGCCGGCAAAGGAGTGGAAGCCAAAATCAACAAAGAAGTCTTCCAACATTGATACTGATAATAACAATGGAACAGATGTAATAACAACTTCAGCTAGCAACACTGAAAATTCTAATGTGTTGGATGAGAATGCTTTGTGTGAAAAAACCTCTCAAGCTTGCATACATGAGGTGGAGCATGTTATTATCCCAGAACATCTCCGTGTACCAGAGTATGAGCAGACAGGATTAAGGTTTGGCAGTTTTTCCCCTGGATCTGGTGCAGACCAAGTATCAAGCTCAGAAAGTCCATCGGAATCTGAAGAACAAGAACATGTACAAGAACCAGTTCAACTTGTTGTTGAAGATGACTCATTGCGTGCTGGACATGATGAGGTAGATGTGGAAGCAAGATCTTCACAACTCAATCTTTCCACATTGACAGCCGAGATATCCTTGCCACCATCTGAGGATAGCGTAGAAATGAATGGCGAAGAGGTTGAGAACGATGATGGTCTTGGGTTGGTTCAGAGTGATACTCCACTTGCACCTGTTGATGGCCAAAATATGCAGAGTGCCTCAAATCTGACTGCGTTTTCAACATATGGTCATGAAGACCCTAATATGCATCCAAGTAATGAGGCACAGTTATACAGACTAGTGGAACCTAATGTACATCCACAAGTAATGGCATCCCCTTCTCAGGGGTACCCTTCGGAAAATCCTGAAGCAGATAATGCCGTGCAAGTGTTCAGAATACCAGAATCTAATGTACATTCACAAGTACTCCCTTCCACATCTGAGGCCATTAGTTCACAGATCGTGAGCAGCAGCCCTGTTGCAATCTCTCAACAACTGCAACATATGTCCCAGCCACAACAAGCAGCACAGCTCTACCCTCCTGTTCATATGCAACATTATCCAAATTTCATGCCATACCGTCATCATATCTATTCTCCAGTTTATGTCCCACCCATGGCTATGCCAAACTTTCCAACAAATATCCCCTATCCATCAAATGGAAACAATTATCTTCAGATGCCAGGAGGAGGTTCACATTTAGCAGCAGGTGGCATGAAGTATGGAGTTTCACAATATAAACCTGTTCCAGCTGGTAGCCCTTCTGGTTATGGAAATTATACTCATCCAGCTGGTTTTACATTTAGCTCTCCTGGTGTTGGTGTTATTGGAGGGGCTGTTGGTGTCGATGATGTCAATAGGATCAAATACAAGGATAACAACCTTTATGCACCATCCCCACAGGTGGAGACATCTGATATCTGGATTCAGACACCTAGAGAGATGCCGACTTTGCAGTGTCCCCCATATTTCAATTTATCAGGTCAAGCAACATCTGGTGCTTTTGTGCCGAATCCTGGGAATGCATCATTCAATGCTACAGCTCAATCCTCCCATGCGCAATTCCCAGGCTTGTACCATGCACAGCAGCCTTCGTCAATTGTAAGTCCACATCCCATGGTGCATCAACAAGTCCAATCGGCAATTGGTCCCAACGGTGGAGTTGGTGTGGCTACACCAGCCCCTCAGGTAGGGGCTTATCACCAACCCCAGCTTGGTCATTGGAGACCTGGCTTTTAA</cdnaseq>

Protein Sequence

<aaseq>MAGGGRAGTEKGAAAGRGQTAIQSTIQSIKEVVGGHSDADIYAALRECNMDPNETTQKLLNQDPFHEVKRKRDKKRESAGQKTVPDASAQAEHNSQWTKPRTQRVENDQRRAYSHGQASGNTAESHGPNREFRVVRDSRHGVVENRPELGHKGSPNVKVSDRSVPVVQTGRNHPPATTSEGQITQGAKHSYNSDVHQVKRQAQGTAQKYVKPHLKNSQDEQHPPTSDPAHTRPNLKAAEGAVGSVRRHVGVVNVQRQPSGRSSSHLHVQSGGSHVNNQRGNFVPGGPSGRHFMSKNMQSVHRTALDSVHRGRSGGRSFVASSSKYQQGPASNQKVTQPAKEWKPKSTKKSSNIDTDNNNGTDVITTSASNTENSNVLDENALCEKTSQACIHEVEHVIIPEHLRVPEYEQTGLRFGSFSPGSGADQVSSSESPSESEEQEHVQEPVQLVVEDDSLRAGHDEVDVEARSSQLNLSTLTAEISLPPSEDSVEMNGEEVENDDGLGLVQSDTPLAPVDGQNMQSASNLTAFSTYGHEDPNMHPSNEAQLYRLVEPNVHPQVMASPSQGYPSENPEADNAVQVFRIPESNVHSQVLPSTSEAISSQIVSSSPVAISQQLQHMSQPQQAAQLYPPVHMQHYPNFMPYRHHIYSPVYVPPMAMPNFPTNIPYPSNGNNYLQMPGGGSHLAAGGMKYGVSQYKPVPAGSPSGYGNYTHPAGFTFSSPGVGVIGGAVGVDDVNRIKYKDNNLYAPSPQVETSDIWIQTPREMPTLQCPPYFNLSGQATSGAFVPNPGNASFNATAQSSHAQFPGLYHAQQPSSIVSPHPMVHQQVQSAIGPNGGVGVATPAPQVGAYHQPQLGHWRPGF</aaseq>

Gene Sequence

<dnaseqindica>1..187#821..864#1483..1630#1715..1823#2775..3289#3997..4315#4722..4986#5166..5270#5376..5474#5988..6446#6693..7028#ATGGCTGGCGGGGGCAGGGCTGGCACCGAGAAGGGGGCGGCGGCGGGGCGCGGGCAGACGGCGATCCAGTCCACCATCCAGTCTATCAAGGAGGTCGTCGGCGGCCACTCCGACGCCGACATCTACGCCGCCCTCCGCGAGTGCAACATGGACCCCAACGAGACCACGCAGAAGCTCCTCAACCAAGGTCATCCGCCTTACCCCCGCCCACCTCCTGATCTGGGCGTGCTTCGATCTCGTGAGGCCGACCTAGGGTTTTGGTCGTGTGATTTCTCCCTGCATTGGGTCGATGTCACGGCGCGGGTCTTTGCGTGGCTCGCGGAATTGGGATTGGGGGGCTAGCGTGCTAGGGTTTTGTACGATCTGGGGCACCTGGCGTAGTTGTTGATTTTGCGGTTGATTTGGGATATTTGGTTTTATATTTCTAGGGCTTTTATCTGCTCACATATAGGTGGGTTGGTTTGGGCCTTTTAGTGTGATAGATTAGTGCTTAGAACCCTGGGTTTACTAATGGTTTTGATTAATCAAGCGGTCAATCACACGGATTTATCTGATACAAGGGTGTTATGTCATTTTGAGTAGATGGGCGTGGTGGTACTGATACTTTAGTGGTTTTACCAAAAGAACTGAATTGCTAGTACAACCACTTGATGTTCTTATCCCCAAAACTTAGTCAGTGGGGATATTGCAGCCTACAGGCATGTCGCATTCAGCTTATTTAATATTTGTGAAGTTTCCTTATTATTATAGATGATGATATTATTTCTGTATTAGGTATTTATCTTCATAGTCTAATTCCTTTCATGGTTTACATTTGCAGATCCATTTCATGAAGTGAAAAGAAAAAGGGACAAGAAAAGAGAGGTATACATTTTTGCAGTTTTGGACTCATGTTAATGAGGATTGAGAAATGTCTTTTTACTATTTTCTTTTGGCAGTAGCCCATTAACTCATAGCCAACTACACAAATAGTTATGCTTCGTATACCTTTCTTATAGTCGTAGGACAATCATTGTTGTGACAGCAAACTACAATGTAAAATTTGATCATATACCCACTGTTTTTAAGATTGAAATTGAGGAATTACCCTCCCGACCCACATGCAATTACCTTAGATGAATCCATACGTCATTGGCACAGGAGAGTAAATCCTCAATTTCTAAAGGGATGGTATATGATCAAACCTCCATTTACATACCAAGATGTAGTACGCCTGAATATGTGAATTCAATTGTTAATGTTAGGTTTGCCATAATTTTACAGTGTGTAATTTGAAACTGAGATGGATTCAAAGTCTACATCTTCCATCTAATTACAATCTTATTAGTTTTTGAGGCTCTTCATGTTACAGTTTGGTTGTGTTGAATTTCTTTATGCCCACATGTGAGATTTTGCTCCGAATGTGATGTTTAATCCATTGCTTAAAGTCACACATTGCTATGGATCACCCTTTTTGATCATGCATATCTGTTGCTGTTTTAGAGTGCTGGACAGAAAACTGTTCCTGATGCTTCTGCACAAGCTGAGCACAACTCACAGTGGACGAAGCCACGCACACAAAGGGTTGAGAATGACCAAAGAAGAGCTTACAGCCATGGTCAGGCATCTGGTAACACAGCTGAATCTCATGGTTTGTATAATATCGCCATAAGTTGGGCAATATTGAGAAAAAAAAGTGGTTACATTTCTAATTGTTTGACATGGCTTAATGTAGGTCCTAATCGGGAATTTCGGGTTGTGAGAGACAGCAGGCATGGTGTGGTTGAAAACAGACCAGAGCTAGGACACAAAGGTTCACCAAATGTAAAAGTGTCTGATAGGAGGTATGATTGTCGTATTGTCTGGTTATTTTTTCTCTTTTGCCCATACTACGTTTGGTACCCTATGTTGGCTAGTTTTGAGACCTAATCTATATCTGGGTCAAATCATATGTGAGTCATATCATCTGTATATTTATTTGTTCATTGTAATGTTTGTAGTTGATGTATAATTGCAGAGTAGTAATATTTTTTATTTAAAAAATGGCAACATTGAAGTAAATAAAGTACCTTGTGGTTAGACAATGTTGGTTTGGGTAACACCTATATACTTCCTCCGTTTCATAATGTAAGTCATTCTAGCATTGCCCACACTCATATAGATGTTAATGAATCTAGACATATATATGAATCTAGATTCATTAAAATCTATATGAATGTGGACAATGCTAGAATGACTTACATTACGAAACGGAGGGAGTATCAAGCAACATTAAACCTTTTTACTTTTACCATTTCCATGTCTAACCTGATATGCTGTTTTCTTTTCTTGCTTGGAAGATTATATACTGCTGCTTCATTGGTTCTGCGGTGCCTTTTTCAAGATCTTTACTTTTGCTATTCTTGGATGCTGTAACTACTGCCTTCTCTTTTCTTGCATCCTAAAATCCATGTCTCAACCTTTTCAAAACTCGATTGCCAATATTTTCTGGACCTATTTCGATTTGTTATATGAAAATTGTATATATATAAATATCTTGATGTAAAGTTATAAAAAGTATTGCCAGAGTCACATCTCAAGGACCATATGAGTCTATGACAAGTAAAAAAACATACACACACAAAAGAATGGATGTACTAGTTAGCAAAAATTGTTTTACAGCCAGAACTAAAATACTTCTACTGGAATTGGTAAATCTTTGCTGACCTAACTAAAAGAATGGATGACCAATTGTCTTGCATTTGTGTGCCTTGATACTAAACTAACATTTTGCTTAATGAATTGTTGTTCTGTAGTGTGCCTGTAGTTCAAACCGGTCGGAACCATCCTCCTGCTACAACTTCAGAAGGCCAGATAACACAAGGTGCGAAGCACAGCTACAACTCTGACGTGCATCAAGTGAAGAGACAGGCTCAGGGCACTGCTCAGAAATATGTGAAGCCACATTTGAAGAACTCCCAGGATGAGCAACACCCTCCTACTTCTGATCCAGCTCACACCCGACCAAATTTGAAAGCTGCTGAAGGTGCTGTTGGATCCGTTCGACGCCATGTTGGAGTAGTTAATGTGCAAAGGCAACCATCTGGCCGCTCAAGTTCTCACTTGCATGTACAAAGTGGTGGTTCTCACGTAAATAATCAGCGGGGAAACTTTGTCCCAGGTGGACCATCTGGACGCCATTTTATGTCTAAAAACATGCAGTCCGTTCATAGAACTGCTTTAGATTCAGTACATCGTGGCAGATCTGGTGGCAGATCTTTTGTTGCCTCTAGTAGTAAATATCAGCAGGGTCCTGCCAGCAACCAGAAAGGTAACATTTTCAAAGTTATTTGTGTCATTCAGTTCTGGTTAGCAAATCATCAAAGTTATTTGTGCTATTCAGTTGGTTAGCAACAGTGTATCAAAAGTGACCATATTTGTTTTCTTGCAATAGAGACACTCAAGATTTGAAGATGAAAAGTTAACATATTCCCATATCACTCCATAGATTGCTCGTTCTTGTTGTTTGTTGGTTGCTAGGACTAAATTTTGGCTGCTTAGTAGTCAGTACTTAGAAGATGAGCAATTCAAATCATGATGTAGGAAAAGACAGACCTGACATCATTTTGTTCTGACGTGATTCTTTAATATGGTAGCTCAACGATGAAATTTCCTTTATGAAGTGCATATAGAAAAATAATAGGACGGCCTGGACGGGTATGCATTTCTCTTTATGCCAATAAGAAATTTTGGCATGAATCGAGAATGAAGTAAGTGATGTGCATTTGTTCTGAATCACTGAAGGATATTCATATATATTTCAATTGACTGTCTTCCTTGTCTACCTGTCGCTTGTTCCAATCACCTTTTTACACATTTTTATCAGAAATTCCGTTTGGATGGCTAAGTAGTTCATGTGTAGCTTACTTTTCATGTTTTATATTCTCTGATAACATCAATTATGAGGTCTGACATGGGGTGTTTGGGCCACATCAGTGAAATTCACATTGTTATACATGTTCTCTCTCTCCTCTGCAGTCACACAGCCGGCAAAGGAGTGGAAGCCAAAATCAACAAAGAAGTCTTCCAACATTGATACTGATAATAACAATGGAACAGATGTAATAACAACTTCAGCTAGCAACACTGAAAATTCTAATGTGTTGGATGAGAATGCTTTGTGTGAAAAAACCTCTCAAGCTTGCATACATGAGGTGGAGCATGTTATTATCCCAGAACATCTCCGTGTACCAGAGTATGAGCAGACAGGATTAAGGTTTGGCAGTTTTTCCCCTGGATCTGGTGCAGACCAAGTATCAAGCTCAGAAAGTCCATCGGAATCTGAAGAACAAGAACAGTTGGGTGATCCTATGCCAATAGCGTGAATACAGATTATCTAGCAATATATACAACTACTTAAAAATAAGTACAAGCAAATTTGTCCATTGAAATTGCTTCATTACTGCATAGAATTGACATATGCATTCTATAGCTAAAAAAATGTTCTGTATGCTCCATTTACTTTTCTACCTACTTATGAGTTATAACATCTTATTTTCTTGATATTGTCTTTTGGAAATGTAATCATGGTGAAATAGTGAGTATTTTGAAACCTACAGTAACTTAATGCAATACTGCTTGTTAGTTGCTAAAGAAAGGCTCTAATTTAGCATGCCATACCTAAATGTGGTGTGGATTTTCATATCAGAGCTTTCAGCATTCCTGCAAATATGGCATTGTCTTATTTTCTTTGTTACATGTAGTGTACAAGAACCAGTTCAACTTGTTGTTGAAGATGACTCATTGCGTGCTGGACATGATGAGGTAGATGTGGAAGCAAGATCTTCACAACTCAATCTTTCCACATTGACAGCCGAGATATCCTTGCCACCATCTGAGGATAGCGTAGAAATGAATGGCGAAGAGGTTGAGAACGATGATGGTCTTGGGTTGGTTCAGAGTGATACTCCACTTGCACCTGTTGATGGCCAAAATATGCAGAGTGCCTCAAATCTGACTGCGTTTTCAGTAAGTCAATGAAGAATTGTTAGCTATACGGGAACACCTCTACTTTTTAGTTTGCTGATTAAGATTTTTGAAGAATTACTTCTGTTGGCATTTATTTTTAGATTAGTATTTATTTTGTAGGCTGTTCTTTTTCTGACATTCTCAGATCTTTGTATGAGTAAAACTATTACTTTTTTCAGACATATGGTCATGAAGACCCTAATATGCATCCAAGTAATGAGGCACAGTTATACAGACTAGTGGAACCTAATGTACATCCACAAGTAATGGCATCCCCTTCTCAGGTAAATTTACCGGTGAGTTCAGTTGTACTTGGTTGTCATTGAATGCATATTCTCTTGATGGAATGCTATAGCTTCCTCACCATCTGTTTCCCTATCTGTAAGCAGGGGTACCCTTCGGAAAATCCTGAAGCAGATAATGCCGTGCAAGTGTTCAGAATACCAGAATCTAATGTACATTCACAAGTACTCCCTTCCACATCTGAGGTGGCACTACTTATCATCTTGCAACCAACCCAATGCTTACTTTCTTCTGTGCTTTCTTTCTCATTACCTTTTGCCCACCCATCTGTTATTTATCCTTCCAGGCTTCTATTTCTTTACTCGGTATCATGTTGCGTAGGGCTGCAAATGAATCAAGTTTGGTCATATTTCATTGGTTTAACCTGCATTGATTTATAAACTGGCCTGATTGGACTGTTTTAGTTTGGCCAGAAGGCTAGTTACCATGCTCAACATTTAATATTTCAGCTGGATATGGTTGGACCTAACCAAAGCATAACTTATGTCCCCCCTTAAAATTGGTGTATGTCAGGTTAACCAACAAGGTCATGAGCCTTGAGCTTACCTTTGTTCTTTTATTTAAAAAATAATAATGTTTTGTTGACTGAGATCAAATCCCTGGCAACACTTTATTTAACACAATGTCTTGAGGGCAAGTACTATTTGTCTCAATGTTATTGTGACACCTGATCTCATCCATTTATTCTTCTTTTGCAGGCCATTAGTTCACAGATCGTGAGCAGCAGCCCTGTTGCAATCTCTCAACAACTGCAACATATGTCCCAGCCACAACAAGCAGCACAGCTCTACCCTCCTGTTCATATGCAACATTATCCAAATTTCATGCCATACCGTCATCATATCTATTCTCCAGTTTATGTCCCACCCATGGCTATGCCAAACTTTCCAACAAATATCCCCTATCCATCAAATGGAAACAATTATCTTCAGATGCCAGGAGGAGGTTCACATTTAGCAGCAGGTGGCATGAAGTATGGAGTTTCACAATATAAACCTGTTCCAGCTGGTAGCCCTTCTGGTTATGGAAATTATACTCATCCAGCTGGTTTTACATTTAGCTCTCCTGGTGTTGGTGTTATTGGAGGGGCTGTTGGTGTCGATGATGTCAATAGGATCAAATACAAGGATAACAACCTTTATGCACCATCCCCACAGGTACAATTTATAGATGACTGAAGATCCTGCTTTGTTTCAAATTGAACTATGCACTTCTGTTTAAAATACCACAACCTACTCTATTTACTTAGGCCACTGTGGTAGTCTAATTAGAACAGCAATAACTTATGAATTCTGTTCTACCTCTTCCTTACAGTTCAATAGTAGTTCTATTTTATGCTAGCGTGCCTTGATGGTATTTCCTGTACGCATTACTCTATTCACTAATTGGGATGCTTTTTACAGGTGGAGACATCTGATATCTGGATTCAGACACCTAGAGAGATGCCGACTTTGCAGTGTCCCCCATATTTCAATTTATCAGGTCAAGCAACATCTGGTGCTTTTGTGCCGAATCCTGGGAATGCATCATTCAATGCTACAGCTCAATCCTCCCATGCGCAATTCCCAGGCTTGTACCATGCACAGCAGCCTTCGTCAATTGTAAGTCCACATCCCATGGTGCATCAACAAGTCCAATCGGCAATTGGTCCCAACGGTGGAGTTGGTGTGGCTACACCAGCCCCTCAGGTAGGGGCTTATCACCAACCCCAGCTTGGTCATTGGAGACCTGGCTTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022510