BGIOSGA022515

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Revision as of 13:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022515| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022515, complete gene.| tag = P0529B0...")
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Gene Name

BGIOSGA022515

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022515, complete gene.

LocusTag

P0529B09.16

Ensembl Transcript ID

BGIOSGA022515-TA

Ensembl Protein ID

BGIOSGA022515-PA

Length

5650

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6252244..6257893

Sequence Coding Region

6252244..6252388,6252480..6252614,6253053..6253093,6253806..6253922,6254122..6254241
,6254325..6254419,6254492..6254585,6254935..6255066,6255534..6255646
,6255786..6255909,6256227..6256343,6256426..6256520,6256612..6256705
,6256998..6257123,6257197..6257309,6257410..6257599,6257744..6257893

Genome Context

<gbrowseImage1> name=IndicaChromosome06:6252244..6257893 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:6252244..6257893 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTGGGCTTCGTGTCGACCTCTCCGGCGCGGAGATCCGCGTGGACCCCGCGTGCGGCGCCGCCGCCGACGATGGCGGGAGCCCGCCCGTGTTCCTCCCCCGCCAGCCCGCCGCGCCCCCGCTCCTCGCGCTCGACATCGGAGGGACTCTGATAAAGCTGGTGTACACGGCGAGCTGCGGTGGCGGAGGCGCGGAGCTGCGGTTCGCCAAGTTCGAGAGGCGGAGGATGCAGGAGTGCTTCGACTTCGTCAGGGCGCAGGGTCTCGTCCACCGCAATGGATCAACTATGGGTTCAAGCAAAGAAAATATAGCATTGAAGGCCTCAGGTGGTGGAGCATATAAATATACTGAAGATTTTCGTGAGAAATTAGGAGTTTGTCTTGACAAGGTTGATGAAATGGATAGTGTTGTTTCTGGAGCAAACTTTTTGTTACAGAGTGTTCCTGGAGCAGCCTTCACACACATGAATGGAAAGAAAAGTTCTGTTGATATTTCCCCAAATAACTTGTTTCCTTACCTTCTTGTCAACATTGGCTCTGGAGTTAGCATATTAAAGGTCACTGGAAATAGGAAATTTGAAAGGGTAACTGGGACACATATTGGTGGCGGAACAATGTTTGGTTTAGCAAAACTTTTAACAGGCTGTAAGAGTTATGACGAGTTCTTACAATTAAGCCAGAAAGGGGACAATTTTGTTCTTGATCTAATTGTGAAGGATATATGTGGGGAACTTGTTTGCCAGAAGCAAGGACTTTCAACTTCAACTCTTGCTTCTAGTTTTGGGAAAGTTATCACTTCTAAGAAGAAGTTAACAGATTACAGACCTGAAGATCTAGCATCCACATTGTTGAGCGCTTTTACCTATAACATTGCACAAATTTCTTTCCTTGTTGCATCAATCTTGCATCTCAGAAGAGTGTTCTTTGGTGGATCTTATATACGTGGACATAAGAGCACGATGCAAAATATTTCTTATGCAATTGACTTCTGGTCGCAGAGTAAAATGCAAGCTGTCTTCTTGCAACATGAAGGGTATTTAGGAGCTCTTGGTGCCTTAATGAGTTATGGTGATTCTGGAGATAAAAACATGAACCTTGAGGAAATGAAAGAGGAGGAGAACATCCATGAATCAGCAACACCTATTGATGAGACATCAACAGATGAACATAATGATGGAAACATATTTCCTTATCTCCTTGTTAATATTGGATCAGGTGTCAGCATGATAGAGGTAACTGGAAATGGGAAGTTTGAGCGGATTATAGGATCTCACCTAGGTGGGGGCACTATCCTTGGTCTGGCGAGGCTTTTGACTGGTTGTTCAAGTTATGATGAATTCTTGGAGTTGAGCCAGAGAGGCAATAATTTAGCTGTTGATTTGACTGTTGGTGACATATATGGGGAGCATGGTTACCCAAAGATTGGTCTTCCTGCGTCCACTACTGCAGCTAGCTTTGGAAAAGTGAGTTCAAGTAGACTTTCGGAATACAAAGTAGAGGATCTTGCGGCAGCTCTATTGAATTCTTTCACCTACAACATTGGGCAGATAGCCTACTTTGTAGCTAATCTTTCTGGTCTGAAGAGAATTTTCTTCCGAGGTGCTTATATCTGTGGCCATGAGAAGACTATGGACAAGATTTCCCATTCCCTCAAGTATTGGTCCAAAGGCCAAGTTCAAACAACATTTCTGTGCCATGAGGGGTTCTTGGGAACACTAGGTGCATTTTGGAGCTATGAGAACATGGGTATTGACGGCTTGGCAGCACATGAAGTCATAAGGGAGGTCTTGCTTGGCGCTCCTTACACTGGGCAGCTTCCATCTCTGCCTCTGACTCACCAACAGGACAATGGAGAAGATACGACCATTGAAGGAGAAGTAGAACGGCTTCGACATGACAATGCTGTGCTGAAGGCTGAGCTTGAACGGTTACAAAGGGAGAACACAGAGCTCAAAGCGAAGCTGGTAAAATCTGGCAAACCAAATACCTTTTATCATTAA</cdnaseq>

Protein Sequence

<aaseq>MGGLRVDLSGAEIRVDPACGAAADDGGSPPVFLPRQPAAPPLLALDIGGTLIKLVYTASCGGGGAELRFAKFERRRMQECFDFVRAQGLVHRNGSTMGSSKENIALKASGGGAYKYTEDFREKLGVCLDKVDEMDSVVSGANFLLQSVPGAAFTHMNGKKSSVDISPNNLFPYLLVNIGSGVSILKVTGNRKFERVTGTHIGGGTMFGLAKLLTGCKSYDEFLQLSQKGDNFVLDLIVKDICGELVCQKQGLSTSTLASSFGKVITSKKKLTDYRPEDLASTLLSAFTYNIAQISFLVASILHLRRVFFGGSYIRGHKSTMQNISYAIDFWSQSKMQAVFLQHEGYLGALGALMSYGDSGDKNMNLEEMKEEENIHESATPIDETSTDEHNDGNIFPYLLVNIGSGVSMIEVTGNGKFERIIGSHLGGGTILGLARLLTGCSSYDEFLELSQRGNNLAVDLTVGDIYGEHGYPKIGLPASTTAASFGKVSSSRLSEYKVEDLAAALLNSFTYNIGQIAYFVANLSGLKRIFFRGAYICGHEKTMDKISHSLKYWSKGQVQTTFLCHEGFLGTLGAFWSYENMGIDGLAAHEVIREVLLGAPYTGQLPSLPLTHQQDNGEDTTIEGEVERLRHDNAVLKAELERLQRENTELKAKLVKSGKPNTFYH</aaseq>

Gene Sequence

<dnaseqindica>1..145#237..371#810..850#1563..1679#1879..1998#2082..2176#2249..2342#2692..2823#3291..3403#3543..3666#3984..4100#4183..4277#4369..4462#4755..4880#4954..5066#5167..5356#5501..5650#ATGGGTGGGCTTCGTGTCGACCTCTCCGGCGCGGAGATCCGCGTGGACCCCGCGTGCGGCGCCGCCGCCGACGATGGCGGGAGCCCGCCCGTGTTCCTCCCCCGCCAGCCCGCCGCGCCCCCGCTCCTCGCGCTCGACATCGGAGGTACGCGCGTTTTCCTCGCTCTCTCACGCGCGAAGTAGACGATCGTGGTGGATGAACTCGCTCCGGGGTGGTGTTTTTTTTTTTTCCGCAGGGACTCTGATAAAGCTGGTGTACACGGCGAGCTGCGGTGGCGGAGGCGCGGAGCTGCGGTTCGCCAAGTTCGAGAGGCGGAGGATGCAGGAGTGCTTCGACTTCGTCAGGGCGCAGGGTCTCGTCCACCGCAATGGTAGTGCGTTTTTTTGCGCTGAATTTTGGTTGATTCTCTAGCGTTCTAGCTCCATAGTTTTTGAGACTGCAAAAACTATGGATGGTAACTGCCTAACTGGCGTGGGACTTCAATACTTGATGAGGAATTGTTAGTTGCTCTCAATTTAGGACTGTAGCCTGTAGGAGCTCATCACATTTGGGAATTTCTGTGGCTATTCATGCTGGCATCTTTGTCTGTTCGTGATCAACAAAGCAAGCTCACTGTGGCTGTTGGACATGGCCGGTGACATTTGCAAGCGTTTCACTCCATCATGCCGGCGTGAAGAAGGCTATATATATGACGCGATTTTTACTGCAACCAAAATTACAATTTCTGTTGTTGGAGCTTCCTGTGTTCGTGGGAAGAAAAATGTTGGAACTATCTGTTGTGAGCTTAATTATATTTTTTTAATTACAGGATCAACTATGGGTTCAAGCAAAGAAAATATAGCATTGAAGGTATGATTTTTCTTGTGCTATGTATTAGTGGTCCGGAAAATCAAGATATCAATGCAAGTGGAGACCATTCCAGCAATCTGCTGTTTCCTCTACATTTATTTGCATGTTCATATGAATGTTTTACCTATTATCATACCCAAAGAAAAATCAAGAGCTTTGAATGGCTTCATTATTGCTCACTAGTGATAGCGGATGTATGATGGGCTTTGTATGGCATTCAATAGTTTACTATCATATGATTGGATGTTGCTGCTACAATCCATTGAAATCATATTTATTCGGTGGAATTCAAAAAATACAAACATAGAAATTAGTTGCTTACATTTTGTATATCATATTAGTTGCATTTAATTGACACAACTAATTCTCGAATTTAATTCATGGAGTTGCATTGCCAACCGATGCAGAGTTACAGAAACAATGTTGCAGTATCCCCAAGCAGCGGAGTATAACTTTTTATCATTATTATTTGAATATTATTTTATTTAGCAAATCAGGGCTTTCTCCTCCTTGGTATGGTATCACTACATCATTATAGATGTTGGCAAGTATGCTTTTCGAGCATTTAATGCACAGCTTTGTGTGAAGACGTGAAACATTGTTGAATATATGATTTAGCAGCCTTAGTTATTGATCTAACATATATGATATTATCATCATCTTTTTCTTTGTTGACCTGAATAGAATTTAATGTGATCAACACTGTCTGCAGGCCTCAGGTGGTGGAGCATATAAATATACTGAAGATTTTCGTGAGAAATTAGGAGTTTGTCTTGACAAGGTTGATGAAATGGATAGTGTTGTTTCTGGAGCAAACTTTTTGTTACAGGTCAGTCATATGCATCTATATTCATTGTGGCCGTTAAATAAATCACTGCACATCTTGACCACTCTGTAGATTTTCAATTTGTATTTTGGATGGGACCACCAAATTCTTGAGAAAATTGCAGGCAACTTATCGTCTGTATCGTCTGGATATTTATTTCTTATTTGGAGATTGTTTTGGTTAAACTGATACTTTCTTGCAGAGTGTTCCTGGAGCAGCCTTCACACACATGAATGGAAAGAAAAGTTCTGTTGATATTTCCCCAAATAACTTGTTTCCTTACCTTCTTGTCAACATTGGCTCTGGAGTTAGCATATTAAAGGTTGCACTTCTTCCTCATGATACCTGTATGGAAATGCCTTACAATGCAGCTCATATAAACATGTTTTATCAAGTTTAATGTAGGTCACTGGAAATAGGAAATTTGAAAGGGTAACTGGGACACATATTGGTGGCGGAACAATGTTTGGTTTAGCAAAACTTTTAACAGGCTGTAAGAGGTAATCCCTATACTTTTATGTCATATATTGTCTTGGCTACTGTTTCCTCACTGATATGGTATAATTCTCTAGTTATGACGAGTTCTTACAATTAAGCCAGAAAGGGGACAATTTTGTTCTTGATCTAATTGTGAAGGATATATGTGGGGAACTTGTTTGCCAGAAGGTTTGCCTTTACCCTTTTCTTGTTTTATTTGATTGACCAAGACCTCTTGTCTTGCAAATTTAATTTTCACTTTGTCCTTGTTTCTTTTGTTTTAGTTTTGGTAGGCCAGTCGTGCTTTTGCATGCGGGCTAACTCTACCATACTTGATTGTATTTATTTATATGCAACAGATTTATTCTTTTAGCATCATTAACAAAGCAGTATGACTTCTAGGATTATTATAATTATTAATGACATGCACCTATTTATTTATCTTCAGCTATCTTTTAAGTTTTGAAGTGTTGATCCTTTCATTTCATCATTGAATATTTGTTCTTACATCTTATGGGTCCCTTCTTATATGCTCCAGCAAGGACTTTCAACTTCAACTCTTGCTTCTAGTTTTGGGAAAGTTATCACTTCTAAGAAGAAGTTAACAGATTACAGACCTGAAGATCTAGCATCCACATTGTTGAGCGCTTTTACCTATAACATTGCACAAGTGAGTTTTTGTTCGATCTTTACCTATAACATTGCACAAGTGAGTTTTTGTTCGATCTTTCTTCTAGCTATTAAGTCACTACAGATTATGTTGGAAGTGGATAACGTAAGACAGAGGAGCTTAGTTAAATTCTCTTGGTTCCTTCCTCAGCTGTGTGCATCTATGGTACAACCACACTAGTTAACAGCACTTTCTTGAAAGAAATTACCTGGGAATATGCAGTTATAATTTGGAATAAGAAAAGCACAGTAACCAACGGTTTCTTCTGAACCTAGGTAGGGATAAAAGAAACATGTTTAAACTTAAGAATGTTTCAGCAGAAAGCAGTCTAGGCAAATGACCTCAAACATGCTGGTAAAACTTTATCAGAAAGAACTCTTGTTTTACCTTTCAACTTATGCGGTTCTGTTGTTACTATGTTTTCAGTTACTGGTTGTGGTAAAATAATCATGGTATTTGTCATTCAGATTTCTTTCCTTGTTGCATCAATCTTGCATCTCAGAAGAGTGTTCTTTGGTGGATCTTATATACGTGGACATAAGAGCACGATGCAAAATATTTCTTATGCAATTGACTTCTGGTAAATACTTAAAACTTCCTAAAATTTTAAGTGTATCAATGTGGATGTCATTTTTCTTCAAAAAGTTATATAAAACTGTATATTCATAATTGCAATATTCCATTTGTTGGGACTTTAATATGCGAGGTCTGTTATTCAGGTCGCAGAGTAAAATGCAAGCTGTCTTCTTGCAACATGAAGGGTATTTAGGAGCTCTTGGTGCCTTAATGAGTTATGGTGATTCTGGAGATAAAAACATGAACCTTGAGGAAATGAAAGAGGAGGTGAGTTAGTGAGTTACTAAGAAAATACTGTTGACTGTTTATCATTGTCCTACTACTCCAAAAAGAAAGAAAACAAATTTGGCTCTCATTCTTTATGTTTTTTTATCTAAGAAAAAGTTTATGTGCTACTAGATACAAATTACACAAAATCTAGAGTAATTCACAAGTGGAGGTGTTATCTGCATCAGTCTATTTGCAACACATGTCCTTTTGTAAACTGTTTGATATTTTCCAATAGGTGTTTATGTCATTAGGATTATTTCTAATTCCAAGCTCAAACGTGGGAGTTTCTTGTGCTCTATTTTATGTTGCTGTAGGAGAACATCCATGAATCAGCAACACCTATTGATGAGACATCAACAGATGAACATAATGATGGAAACATATTTCCTTATCTCCTTGTTAATATTGGATCAGGTGTCAGCATGATAGAGGTTTGCCAATACACAGCTTCTCATTGCATTTAGTATTTTATTTACAGGACAGTTGTTAATAGAGCATTGTTTTGTGAGGCAGGTAACTGGAAATGGGAAGTTTGAGCGGATTATAGGATCTCACCTAGGTGGGGGCACTATCCTTGGTCTGGCGAGGCTTTTGACTGGTTGTTCAAGGTAATATTCAGTATTCATTATGATTTGTTTATTTTATATTAATATTGGGATTTTATTTCATACTGATTAATTGCTTTTTTTTTGTTATTAGTTATGATGAATTCTTGGAGTTGAGCCAGAGAGGCAATAATTTAGCTGTTGATTTGACTGTTGGTGACATATATGGGGAGCATGGTTACCCAAAGGTATATATACCCATACTCTGACAAAAGGATTTTTTTTTTTGGTGAAACGTCCTGTGTGATATTAATCATTACTAAGCCAAACAACTAACTAAAAATACAATACATATATTTTTTATTTTCCACCCTTAGTTCTTTGGTGGAAGTATCCATAGTTTGGTTAGCAAATGTTAGCATATATTTTTTCTGTCCACCATTTTATTTCCATTTAAATATGTAATTGACTCTTGTTTTTTGTTACATTACTCTAGTGATTGAAAATCACAATGTCCACTTGTTATTCTCTTTATGTTAGATTGGTCTTCCTGCGTCCACTACTGCAGCTAGCTTTGGAAAAGTGAGTTCAAGTAGACTTTCGGAATACAAAGTAGAGGATCTTGCGGCAGCTCTATTGAATTCTTTCACCTACAACATTGGGCAGGTATTTCCAGATATCTGAGTTACTAGGTGTCATTCACCAATAATGTGCTGACCTCATTTTGTTTCTCTTTTAGATAGCCTACTTTGTAGCTAATCTTTCTGGTCTGAAGAGAATTTTCTTCCGAGGTGCTTATATCTGTGGCCATGAGAAGACTATGGACAAGATTTCCCATTCCCTCAAGTATTGGTAAGAAATTCCTGTTAAGTTTGCTATCCAGGAACACTTTAATGCTCAGTTCAATGCGATTGACTTGTTACTAGTTCATTACAATTTTTCTTGCTCTCAGGTCCAAAGGCCAAGTTCAAACAACATTTCTGTGCCATGAGGGGTTCTTGGGAACACTAGGTGCATTTTGGAGCTATGAGAACATGGGTATTGACGGCTTGGCAGCACATGAAGTCATAAGGGAGGTCTTGCTTGGCGCTCCTTACACTGGGCAGCTTCCATCTCTGCCTCTGACTCACCAACAGGACAATGTAAATATTTGACACTGACACGTTTAGCTGCGTAGTTTAATTACCCTATGTTATTTTTCCTTCAAGAGTGCAAAACCTTAATACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTGTTTTTAGGGAGAAGATACGACCATTGAAGGAGAAGTAGAACGGCTTCGACATGACAATGCTGTGCTGAAGGCTGAGCTTGAACGGTTACAAAGGGAGAACACAGAGCTCAAAGCGAAGCTGGTAAAATCTGGCAAACCAAATACCTTTTATCATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022515