BGIOSGA022519

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Revision as of 13:18, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022519| Description = BGIOSGA022519| Definition = Oryza sativa Indica Group BGIOSGA022519, complete gene.| tag = | tid = BGIOSGA022519-TA|...")
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Gene Name

BGIOSGA022519

Description

BGIOSGA022519

Definition

Oryza sativa Indica Group BGIOSGA022519, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA022519-TA

Ensembl Protein ID

BGIOSGA022519-PA

Length

8254

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6309701..6317954

Sequence Coding Region

6309701..6309923,6309999..6310114,6310198..6310365,6317856..6317954

Genome Context

<gbrowseImage1> name=IndicaChromosome06:6309701..6317954 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:6309701..6317954 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGTCGTCTTCGCAGAGACGGATCAGGGGATATTCGAGCAGGTGCTGCACGGGACGCTGGACTTCGAGTCGGACCCATGGCCGAACGTGTCGGATGGCGCCAAGGACCTCCTCCGCAAGGTGCTCGTCCGGGACCCCAAGAAGCGGCTCACCGCGCACGAAGTCCTATGCCATCCATGGCTGCAGATGAGCGGGTTGGCGCCGGACAAGCCGCTGGACTCGGCGGTGCTGTCGCGGCTGAGGCAGTTCTCGGCCATGAACAAGCTCAAGAAGATGGCATTGAGAGTGATCGCGGAGAACTTGTCGGAGGAGGAGATCGCCGGGTTGAAGGAGATGTTCAAGATGATGGACACGGACAACAGCGGGCAGATCAACTACGAGGAGCTCAAGGCCGGGTTGGAGAGAGTGGGTGCCAACATGAAGGAGTCTGAAATTTATCAGCTCATGCAGGCTCGTGAAACACGTGTTGCTGCTAATAAGAGAGAACTACCACGAAGTTCCATCTTGACTCTTGACTATTGGAGTTTTGGGCGGCGGGTGAGCCGTGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MXXXXXXXXXXXXXXXXXVVVFAETDQGIFEQVLHGTLDFESDPWPNVSDGAKDLLRKVLVRDPKKRLTAHEVLCHPWLQMSGLAPDKPLDSAVLSRLRQFSAMNKLKKMALRVIAENLSEEEIAGLKEMFKMMDTDNSGQINYEELKAGLERVGANMKESEIYQLMQARETRVAANKRELPRSSILTLDYWSFGRRVSRE</aaseq>

Gene Sequence

<dnaseqindica>1..223#299..414#498..665#8156..8254#ATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGTCGTCTTCGCAGAGACGGATCAGGGGATATTCGAGCAGGTGCTGCACGGGACGCTGGACTTCGAGTCGGACCCATGGCCGAACGTGTCGGATGGCGCCAAGGACCTCCTCCGCAAGGTGCTCGTCCGGGACCCCAAGAAGCGGCTCACCGCGCACGAAGTCCTATGTGAGCTCACCACTCTCTTGGCAATCCGCCATGGCTGCTTCCTGCAACACTGACACTGCTGTTCTTTTCTCGCAGGCCATCCATGGCTGCAGATGAGCGGGTTGGCGCCGGACAAGCCGCTGGACTCGGCGGTGCTGTCGCGGCTGAGGCAGTTCTCGGCCATGAACAAGCTCAAGAAGATGGCATTGAGAGTGAGCACCTGTCTTGCATTGTGGAAATTGAGATTTGTTCATGATGATGGTGTGTGACATTGATTGGGCGATCGATTGCGCAGGTGATCGCGGAGAACTTGTCGGAGGAGGAGATCGCCGGGTTGAAGGAGATGTTCAAGATGATGGACACGGACAACAGCGGGCAGATCAACTACGAGGAGCTCAAGGCCGGGTTGGAGAGAGTGGGTGCCAACATGAAGGAGTCTGAAATTTATCAGCTCATGCAGGCTGTAAGTTTGTGCTCTAAACCCCTCTGCTAATCATATTCACTTGGAGATCTTGGTTGGTAAAGATGTTTTCTAAAACTATTAGTTGCAAATTACTCCCTCCGTTTTTAAATATTTGACGCTGTTAACTTTTTTAAATATGTTTAATCGTTTGTCTTATTCGAAAACTTTAAGTAATTATTAATTTTTTTTCTATCATTTGATTCATTGTTAAATATATTTTTATGTATACATATAGTTTTACATATTTCACAAAAGTTTTTGAATAAGACGAACGGTCAAACATGTGCTAAAAAGTCAACGGTGTAAAATATTTAGAAACGGAGGGAGTAGTAATTAAATGTAATTAGTTACATTTAATTAGATTGGAATGGCACAGAAGTTACATTTTAGACTCTAGTTCTTCAGATCTTCTTATTATTTTTCAGATCTTCAGATATAATGTGACATGAAGGAAGCACACTGACTTGATTGTTTTCTGTTGATAGTCAAAGGAGTTGCATAGAACATTGTCCCAGTCCATGTAGCTCGGCATAACAATGATTAAGAACAAGGGAAATCGAATTGTTTAACCAAATAGTTTAGTCACATGTTCTTTTGTTCTTCTTTGCCTGTTTACTTATTGACAAAGTGTTAACTGGTAAAGACTGAACTGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGAAAAAGAAAGGGAAAAATGAAAAAAGGGATGGAAAGCGTACGTACCCATGTACGTAGGTGCGTACCTATGCCAGGGGATGAGAGGTGGGACCTTGCAGTATTTAGTTTGCTCTAAGATCAATTTAATATAACGGTTTATAATATTGGGCGTACCGATTTAACCGAAAATCAAGTAATGGATACTTTGCTTTTCTTTCCATAGAATTTCTAATATTTCCTCTAATTTATTAGAGCACCACGTGACAGCTTGAGAGCACTTTAAGAAATTTTAAAGGACTTAACACATGTAATTAGAATATTAACCGCTTAATATATATGTATGGGGCATATGGTAATATTTGTTCTAGCTTCGTGCATGTTTATATACATGTCGAGAGAAATTAATTATGTGGCTAGCAAGCCATTAGATGTCTAATTAGTAGCAATTAATTTTGACACCAATTTACAGATGTTGATAGTAGTTTGTACATATTCATCTTACGACTTTGATTATCCGTTGATCCCTAATTTAATGATCACCATGACTCGCATGAAAAAAATATATACTACTTAGGGTTTAGGACAGCTGAAATTGATGAATTATCTTATTTATGTGATAGCTATTTGAGGGTATACATGAATGAATTGACTTCTAAAAAGTTAAAATGTTGTTTAAAAATGACACCGTTTAGAAACTTGGAAAGCGTGCAAACGAAAATCCAACTATAGAATCAAGGAAAAAAAGAGGGTCTTAAACTTCCTTATAGCACTCTTGTCTTTGTAAGAGTTCTATTGATATTCGTTAATATTTTGCTCATATTATAACATAATGATTTCTTTTACGTATACCAACAAATAGTACAAAATCCAAATATGACATAACACAATACATTATCATTATTATGTAATTAACTTTCGATTCCAACTTAAATAGAGCTACAATAGTACAAATCCAACACGACATAACACTATACATTATAATTATTCTGTAATAACTCTCGATTTCAACTTAAATAGAGCTAAGTGTTAGAAAAAACGCAACCCATATTGCTTAATTCTGCTCTTGCTGCATCACACCTCTAATTTTCTTTTCATGTTATTAATAAATTAATCTTCTCCATGTATGAATTTATATGTGGCAAAACGTTAGTGCTGCGGCAGTCATTATCACCTTAGATGCCTCAGACACGATGCTTTGTCACGCGTGCAAAAGGTAAAGGTGCAGACGTGCATTGTGTAGCGGGCCAAAAAGAGAACTTCGGACGCTTTATTTATTAGCAAATAATATATCAGATGATTTAAATGATGAGTCCACCGGTTCTTTATAAGTGTACATTAGTTATTATAGATTTTAAATTTTTAATTTAATGGTACACAATATAATGATGTAGACTTTAGTGCATTATTTGAGAATAATAGTCCAATGTAATAAAAAATAGTTCCGATGATTTAAATAATGGGTCCATCGGTTTAAGTGCACATATAAATTAGTTAATATAGATCTAAAATTGTTTATTTTATAGGTACACAATATAATTGTGTAAACTTTATTTTAAAATAGTGTATTATGTGAAAATAATAGTACCAAATAATGAGTACACATGTTTATGTAGAAAATATATAACATTATTAATTTAATGGTAACATATAATGGTGTAAATTTTATTTTCAAAAATTGTAGAGCTAATTTAGTTACCTGTGAGCATTCTTTGTTGGTGAAATTATGATTTTATATATATATATATATATATATATATATATCTATTATATAAATGGGGAAAATAAGAAAAAAGGAAAAAAAAGAAGGGAAGGAAGCATACATACCATGGTACATACGTATACCCACACATGTGCGGGAGAAGGAGGAGAGGTGGGACCCTATAGTACTTGGTTTGTTTTAAGATCAATTTCATCTAACGGTGTGTAATATAGGACCCACCAATTTAAGTGTAAAATCAAGGGGTAGATGTTTTTCTTTTTTCTTAGAATTTTTATGATTTTCTCTAATATATCAGAGCGCCACGTGATGGTTTGAGAGTGTTTATAGAAAGTTTAATGGACTTTTAGTATATAATAGATAGATAGATTATATAATGTATATTATTCATTTATTTAGATATTTTATGAATATTTCGATGACGTGCGTATAGTACAATACGAACTCAAAATAACTTATATTTGTACAACTATGGGTTGAAATTATTAACGTGGTTTTTATCTCATGTGAGTGAAAAAAAGGAAAAAGACAAGAAAAGTGGGGACGTGAGGCCCTACATGCAAGTACATACTCCGAACCATATGGGCTGGAATATGAATTTTGTTTTTTCTCATGTGTTAGTGAAAAAGAAAAAAGAAAAGGGGGAGTGGGGCCCACGTACAAAATATGTAACGTACATGCACGTACACGTACGGGCCATGTGTGGATTTTTAAAGATAATAATAAATCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACCGCATCAATAATTTATGATATTTTAAAAGAAGTCAGGTGATGTCCATGAATCTGCCACTACTACCCCATCAATGATGTGCTGGAACTTATCTCCATACAAGAAGAGAGTAGTTGTAGGAGCAGCTTTTTTTCAATTGGACATTAAAAAATGCATCATGTTCCCATAATTAAATTATGACGCCATTTTATAAGCTAACTGGGAACTGAAAATGGACTACTTCTGTTTTTCTTGGAGTTTTTAATGTGAGCAAGGCACAAAAGGTTAAAGGAGGCCTGGGAAAAATCGATCTGGGAATTTAGAATCGAGCTATGTTGTTGAAGTTTTTGGACAAATATACGACAGATAGGACTTTGCCTTGGGTGAACTTAATATGGTCTTCACATTACATAAATGTGCCACATCCACATTATTCATTCAATAATTACTACTACCTCCATCCCAATTTAAATGCAGTTGTACATTTTTATGTCCACGTTTGACCGATCATCTTATTTAATATTTTATGAAAAAATTAAAAAAATTAGTCCATATTTTATTATCTAATAACAATAAAAATACTAATTATAATTTTTTTTTAAATAATACGGACGGTCAAATGTTAGACTGCAGTCTTTTCTAGGACGGAGATAGTCTGAGATAGTACTAGTACTTAGACTATTCGGAGGGGATGAAGAAACACCATATGATTTACTTTATAAAGTTTAAACCGAAGATGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGTCGCCCCTCATCGTCGCAAGGCGCCCCGGAGAAACCGCCGCCGCCCGCCGTCCATTCGCGGCCGGCGCCTTCGTCTTCCTCCCGCCAGCCCGCGTGGCAGCCACGTCGGCGCCAGCTCGGCCGAGATCGGGTCGGGCCGATCCCGGTCAGCCCCTCCCGTGCGCGCGTTCCACCGCGAGCCGCGAGGCTGCGCGTGGGCCCGCCGCAACCCGCGTCCACCGCGAACCGCGCGCGTGCACCGCGTCCTAGCCCCGCCCGCGCGCGCGCGCCGCGTGCTCGCTCCGCACGGTGAACCGAGTAATCGGCAAGCGGGTCCCACCCGGGACCACGCGCGGTGAGCCCGGTCCACCGGCTCTCTCTCTCCTCCCTCCCGTGCGAGCGCGCGTCTTGGGCCGGCCGGCCCATTTAGCTCGGCCGGACCGCTCTATTTCTCTTGGGCCGCGCCCAAGCCGCCTGAGAAAAGTCTATATTCCCTCCCTCTTTTCATTTCTTTTCTTTTCTTTTCCAAAAAGGATTTAATTAAATCCTTTTCCTTTAGACCGAAAATCTAATAATCTTAGAAATTCAATATCTTCCCAACCGTAAATCCGTTTGACTCCGTTCAACTTCCAAAATTCCTCAAATCTCGAGATCTATCTAATGGCACGCTTAGAGGTCATTAATAGGGCTTTATTTTCGCCGTTTGTGGAGTTGTCCCGTCTCGCGTGTAGTTTCGGAGCCCGAAGACCCGCAGTGCGAGGATTTCGAGGATCAAGCTCCAGATCTCGAGCAAGGCAAGCCACCTTTGAACATCTTGAGCCTATATTTGAAATTTAATTATGTTGCTTGAAAAATATTATGCATTGATAGGATCACACTTAATCTGTTGTCCCGTCTGCAAGGCAGATTGGCGGACCTACCTAATTTGTTGCATTTAATCCTTCCTTTGTTAATTGTTATATCATGTCCCCTTGTATCGATCTAGTTGCGTCTCGATATTCGTGCACCCTGTGCGAGTATCGACGGACGCCTTCAAACTTAAAATTTGAATAACAACTTGGGTAAAACTTGGGTTTACAAAAGACTTGGAAAACCCGACACCTGGGTCGGTGCTTGCGAACTAAATGAATTTCCAAAACCGCGGACCGGGGAACGTACCGGGTGTACGGTTTCCCGCACTCGCACTTAAGGACCGATTCCTTGGAATTTCATCCAAACATAAGACAAGTACGACCACATGGGTGGAATGGGACACCCCCTGGCTGAGTAACTAGCTTATCAGGGGAGTCTTGATGCCGAGAGACATGTGGATTCGCCGGGGTGGTGTCGGGGAGGACCCCTGGGCTTCCTGGCACAGTATGGTCTGGGACCTAACCTGTTGTTGGTCTGGGACCCCTCTCGTCAGCATATGGTAAACCTGTGTCGGCTTTCGAAATGCCTTGTCATGAAAGCTTGGAGGTCTCCCGACGTGGCTGATCCCCACGGGCTGGGTGATCCGGGTTAGTAATGTCGTGTGGGTAAAGTGTACCCCCTCTGCAGAGGTTAACAAACTGTTCGAACAGCCGTGCCCACGGTCAAGGGCGGATGTGAGGTGATTCCTAGCGTAGTTTTGTTTGACTACTGCTTGTGAAATTACTGTTGTTGAAAGGGGTTCGATGTTTGAAAAATCTGCAGCTGATGGGATCAGCTAGGCCCGGGTGGCCGTTTGAAAGTTGTTGGCCCGGGTGGCCGTTTGAAAAGCTGTTGGCCGGGTGCCAACCTTGTTTCAATTCTAAAAGACTGATGCATTGCACATACTCCGACCGGACGAGGCGCACTGTCTCATCCGGGTCGTTTGAGAAGCACTCACTTAGTTGTTTTTAGAAAAGAGTTCAAATAAAATCAATTGCAAAAACAACAGCCTTTCCTTGAAGCCTGCATTAAACACTTATTTCCTATGGCTTGCTGAGTACTCCTGTACTCACCCTTGCTCTATATAAATAATCCCCCCCAGTTGCTGAAGAAGATGAAGTGGATCCTGCTGATGAGGGGTTTTTCCAGGAGCAAGCCGGCTACGATGAGTTTTAGGGTTTCGGCCTAGTTCCCAAGTCGCGCCTGTGTTGATTGGTCCAAGTCCTGGCTTCCGTTTCCCTTTTGTAATGCAGTTGTGAGCTCGGGATCTGTCCGCAGCCCAACATGACTGTACCTCTACTCTATAATAAAGAGACCTCTGTTGCTGTGATATTCTGTCTCCCTGTGATACCAGCACTGTTTCCTGGGACTGGTATCGATTAACAGATTAATTTGGAGCGTCACGGGCTAGTTCCGGTCGGTATAGTTCGGGGCGTGACATGTTCGAAAACCCCTTCCGATATCCGGTCAAACGACCGATGTGATACCCAAAAATTTTTATTTCACCAACTAAACAGACCCTTACAAACTTATACTACTATGTGGTACGCACCTTATAATTTGTGGTACTCTGTCTGATCATCAGTATACTGTGAATTTTAGACTTTTTTCGGTCTTAAGGATGTGACTTTGACCGTAACATTTTTACACAACAAATTTATCGCGTACATTCTGAAGGTCTAAAAACATTTTTACACCGTGGACACGAGTAGCGGTTGGAGGTCCCATCCTAGTCAAAGCGTCAAACGGTGTTTCACCACTTGTCAGAATTGTTTTAGATGTTTTATTACTTGGTGAAAAATATTTCAACTAGACGCGAAGTTATAAAATAATGATTGCAATATTAAAAAGCCAATACATGATACATCAAAGAAAACCAAATACAACATCAACAAAAATAATTGTTGCCAGCAAGCAACTTCGAGACAGTGGAGGGTGCGGTGCACGCCTTTGATAAAGTAATGTGCATAATGTGTAAGTGCAACATCTGGTTGAATATAGTAAAACACTAAAATAAAACAAAGTGGAACAAAGATAAACATTGGGGAGAATAATGGAGAGCTTGGTCGCGTAACCTGTGACAAATCTAAATCGCTTGGGTGGGGAGCGTTTCCGGGCCATGCAGGAGGTGAAGGCCACAAGAAGAAGAGAAGTGCACTCTCCCGGTAAGGGAGAGGATGAAAAGGTGGGGGTTGTCATCAATATATCTCAACAGGTTTCTCCAGAAGTTAGAAATGAAGATCGGCTGAGAGAATCATTGGTGTGTTTTGTCCCCCTTCTTTTTGTTTCACCAACCAAGAAGTCACCCTTGATTTGATGATCGATCATCCCATCCTTACTGAGCCGTCTCTTCGAACCATTTACATACGACTATATTTTTTAAAGAACATACTTTTTAACTAAATAAAAACACAAAACAAGAAAAGTTCTTCTGTGTGATTTTAGTCCGCTCCTCTGCTAGTTTAACATCGGCGGTCTGTTCAGGGTATCAAACTCAATACATATATGACAAGAATTGCCTCCAAAAACCATACCATATATAAAATTCATTCTATTTTTTAGATAATGGATTATATTGACCCGGCTTCTACACCTTAGAAGGTGTACATAGCCCAACGCAAAGAAAATTATAAATTTATCTTGATGTGCATGTGAAGCGTGAAACACGTGTTGCTGCTAATAAGAGAGAACTACCACGAAGTTCCATCTTGACTCTTGACTATTGGAGTTTTGGGCGGCGGGTGAGCCGTGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022519