BGIOSGA022530

From RiceWiki
Revision as of 13:19, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022530| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022530, complete gene.| tag = OsI_221...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022530

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022530, complete gene.

LocusTag

OsI_22115

Ensembl Transcript ID

BGIOSGA022530-TA

Ensembl Protein ID

BGIOSGA022530-PA

Length

3229

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6456132..6459360

Sequence Coding Region

6456132..6456295,6456390..6457014,6458716..6458853,6458962..6459201,6459280..6459360

Genome Context

<gbrowseImage1> name=IndicaChromosome06:6456132..6459360 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:6456132..6459360 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCCTCTCCGGCGGCGCCACCGCCGCCGCCTCCTCGCCGCCGTCGTCTTCCTCCTCCTCTCTGCCGTCGTCGCGCACCCAGCAGCAGGCGCCTTCACCGAGCTCGAGTCCGCCCAAATCGGCCGCTTCCAGGACTACCTCCGCATCCGCACCGCCCACCCTCCAAGCCGCTCCTCCTCCTCACGTGGCCGGGCACCGGACCCCTGCCTCTCCTCCCTCCTCCTCAACTCCCACCTCGACTCCGTCCCGGCGGAGCCCCAGCAGTGGCTCCACCCGCCCTTCGCCGCCCACCGCGACGCCGCCACGGGCCGCGTCTACGCCCGCGGCGCGCAGGACGACAAGTGCCTCCCCATCCAGTACCTCGAGGCCATCCGGGGCCTCCGCGACGCCGGGTTCGCCCCCACCCGCACCCTCCACATCTCGCTCGTCCCCGACGAGGAGATCGGCGGTGCCGACGGGTTCGAGAAGTTCGCCCAGTCGGAGGAGTTCCGGGACCTCAATGTCGGGTTCATGCTCGACGAAGGGCAGGCGTCGCTGACGGATGAATTTAGGGTTTTCTATGGGGACAGGTTGGTGTGGAGGCTGATCGTGAAGGCTACCGGCGCACCCGGCCATGGCTCGAAGTTGTTCGACGGCGCCGCGGTGGAGAATTTGATGGATTGCGTGGAGACCATTGCCGGGTTCAGGGAGGCGCAATTCGGGATGGTGAAATCCGGGAAGAGAGGTCCCGGGGAGGTGGTGTCTGTGAATCCTGTGTACATGAAGGCTGGCACGCCGAGCCCCACGGGTTTTGTGATGAATATGCAACCCTCAGAAGCAGAAGTTGGTTTTGATTTTCGACTTCCTCCAACTGAAGACGTGGAACATATCATAAGAAGAATCAAGGAGGAATGGGCACCAGCTCATAAAAACTTAACCTACAAGCTGATGCAGAAAGGACCAACGCGGGATTTGGCAGGACGCCCCATGGTCACACCAACCAATGCATCAAATCCTTGGTGGTCTGTATTTGAACAGGCTATCATATCTGCAGGTGGAAAGCTAGCTAAGCCTGAGATTTTATCTTCAACCACAGATTCACGCTTCATCAGGCAGTTGGGCATTCCAGCCCTTGGGTTTTCTCCGATGACAAACACTCCTATATTACTTCATGACAATAATGAGTTTCTGGAGGATAAAGTATTCCTAAGGGGCATCAAAGTGTATGAACATATTATTAGAGCACTGAGCTCCTTCAAAGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MPPLRRRHRRRLLAAVVFLLLSAVVAHPAAGAFTELESAQIGRFQDYLRIRTAHPPSRSSSSRGRAPDPCLSSLLLNSHLDSVPAEPQQWLHPPFAAHRDAATGRVYARGAQDDKCLPIQYLEAIRGLRDAGFAPTRTLHISLVPDEEIGGADGFEKFAQSEEFRDLNVGFMLDEGQASLTDEFRVFYGDRLVWRLIVKATGAPGHGSKLFDGAAVENLMDCVETIAGFREAQFGMVKSGKRGPGEVVSVNPVYMKAGTPSPTGFVMNMQPSEAEVGFDFRLPPTEDVEHIIRRIKEEWAPAHKNLTYKLMQKGPTRDLAGRPMVTPTNASNPWWSVFEQAIISAGGKLAKPEILSSTTDSRFIRQLGIPALGFSPMTNTPILLHDNNEFLEDKVFLRGIKVYEHIIRALSSFKG</aaseq>

Gene Sequence

<dnaseqindica>1..164#259..883#2585..2722#2831..3070#3149..3229#ATGCCTCCTCTCCGGCGGCGCCACCGCCGCCGCCTCCTCGCCGCCGTCGTCTTCCTCCTCCTCTCTGCCGTCGTCGCGCACCCAGCAGCAGGCGCCTTCACCGAGCTCGAGTCCGCCCAAATCGGCCGCTTCCAGGACTACCTCCGCATCCGCACCGCCCACCCGTCCCCGGACTACGCCGGCGCCGCCGCCTTCCTCCTCCCCTACGCCGACTCGCTCGGCCTCCGCGCCGCCACGCTCCACTTCACCCCGTGCAAGTCCAAGCCGCTCCTCCTCCTCACGTGGCCGGGCACCGGACCCCTGCCTCTCCTCCCTCCTCCTCAACTCCCACCTCGACTCCGTCCCGGCGGAGCCCCAGCAGTGGCTCCACCCGCCCTTCGCCGCCCACCGCGACGCCGCCACGGGCCGCGTCTACGCCCGCGGCGCGCAGGACGACAAGTGCCTCCCCATCCAGTACCTCGAGGCCATCCGGGGCCTCCGCGACGCCGGGTTCGCCCCCACCCGCACCCTCCACATCTCGCTCGTCCCCGACGAGGAGATCGGCGGTGCCGACGGGTTCGAGAAGTTCGCCCAGTCGGAGGAGTTCCGGGACCTCAATGTCGGGTTCATGCTCGACGAAGGGCAGGCGTCGCTGACGGATGAATTTAGGGTTTTCTATGGGGACAGGTTGGTGTGGAGGCTGATCGTGAAGGCTACCGGCGCACCCGGCCATGGCTCGAAGTTGTTCGACGGCGCCGCGGTGGAGAATTTGATGGATTGCGTGGAGACCATTGCCGGGTTCAGGGAGGCGCAATTCGGGATGGTGAAATCCGGGAAGAGAGGTCCCGGGGAGGTGGTGTCTGTGAATCCTGTGTACATGAAGGCTGGCACGCCGAGCCCCACGGTAAGAACAAATGAGCAATGCTACACTACTAACTAATTAGCTTAGGAGAAGATGATGCAATGTTCGTGACTTTGCGAGGAACTGGATTCTAAGGTTTGTGATGGTCAGACAACGTTGTCGACATCACCTAAATAGCCAAGATAAGCAACATATTCCAAAATTAAAATCTTCAAATTTGCTTCTAGTTCTTCCTGCAATAGTGTGTTGGGAGTTGCGATTAACTTTATAGCCTTGATAATAGTTGAGCGATACTATTTAGTTATGCTGTTTATTGCTATACTTATGTCTGCTGCTTCAAATTAATGTAGTACTAGTTCATAGTTTTATGCACAAAGCATTCTGTCTTTACATGTAACTTTTTACTATATTTTTTTAGCACAGGTAATAGTATCAGCATGCTAAGTTGTACAGTTAGTCAACTTCCTAACTCAGATGAACAATGAATGATTAATTATTAAGCATACATTAATAAGGGGCTAGTCTAACTTTAGAATCATGGCTCAGGAGTTTACTTTTTTATGCACTACCTATCTCATAGCAACATGAAGACTGAAGCAAAATATAAGCTTGTATCCGTTAATCTTTTTAGATGGAATAATTTAGGGAGAATTTCTATCTTTTTTTTTGTTCTTGTAAAGGGTACGCACACTCACATGTCCATCACTGTAGCATCAAATATGCTGCTTTACAACAATTGGTATACATTTATTCATCCTGAGATTACTCTAGCTGAGATTTAACCTATTGAAATTAGTGGCAAAAATGTATAGTTTGTCCTGTAAAAAAAGCCATAACAAGTGACCATATTTGACTGTCGTCTCCTTTTGTTGACTTCTAGACCTATGGTCTGTTACTTTTGCTTCATTTCCATGCCTTTATTGTATTCTTTACGACGACAGGAAAAACTTGCATTTTGTATCCATTTTCAAGTTGAAGGGCGAGGATTAGATAGATGTTGACACTTGTCACAGATATTCTTTGTTTGTGATAAATCCTTTAGCTATGCCTATGGGCATGACATGTTTCTAGCTTCACTTACTTAATGGACACATAACTTTGATTAGCATTGAGAAGAATCCAATATGGCCAATGCCACCAATTTGTAGATATAAACTTGTCAAGGGATTCAAAAGAGTAAGATAACAGAGGTGAAATTAGTCAAAACTTACCAAATGAAATCTTTGATTGCTGATAGATCACAACCATCGAAGTAAAGTTGAAGGGCCATTCCAATACAAAATGCATTTCAATAGAAGAAGTTGAAGGGCTGGCCATCCCAATATGTCAGGGGCATATTTTTTTTTTTCTTTCGAATATGAGTGAGTTTCAATTAATTATATACCTGTCACCTGAAATTAGCAGTGCCACATGTCTCAAGTAATTGCATTTGATCTGAACTATCCTATACATAAGATCACATGCTGAATCCCACATTCCCACTATCATTATATAGCATCCCTTTTGTTTCACTAACAGTTCCTTTGACTAAATTTGGCTGCACATTATCTGTGGCACTATTTTTTTATTCTGCTAACAACTTGCTCTGGGCACCAACTATCAATTTTAGCTCCAGGTATCTATTACCTACTATTTAGATAAAATAACAAAGTTCTAGTGAAAATGATGGCATTCACTGAATTGAGCATCAGTGTACAGTTTATTTATTTTGGCTTTTAAGAATCTAAAGGCAAATCGATGCAGGGTTTTGTGATGAATATGCAACCCTCAGAAGCAGAAGTTGGTTTTGATTTTCGACTTCCTCCAACTGAAGACGTGGAACATATCATAAGAAGAATCAAGGAGGAATGGGCACCAGCTCATAAAAACTTAACCTACAAGGTGAAATTGTTGCAGTTCTATACTATCAACAGAAAATAACTTTAGTTCTGTATCAACAAACCCATGTATTGCCAAAATGGCTGACGTCCTGAAGTTTACCGTGCACAGCTGATGCAGAAAGGACCAACGCGGGATTTGGCAGGACGCCCCATGGTCACACCAACCAATGCATCAAATCCTTGGTGGTCTGTATTTGAACAGGCTATCATATCTGCAGGTGGAAAGCTAGCTAAGCCTGAGATTTTATCTTCAACCACAGATTCACGCTTCATCAGGCAGTTGGGCATTCCAGCCCTTGGGTTTTCTCCGATGACAAACACTCCTATATTACTTCATGACAATAATGAGGTAATCAATCTTGGCTTGCTCTTGTTTATTCTTGGATACAATGTGATGCTCAAGCTAAGAGATGTCTTGAATTCGCAGTTTCTGGAGGATAAAGTATTCCTAAGGGGCATCAAAGTGTATGAACATATTATTAGAGCACTGAGCTCCTTCAAAGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022530