Os11g0603200

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Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0603200| Description = Similar to ABCF-type protein| Version = NM_001074769.1 GI:115486186 GeneID:4350873| Length = 3815 bp| Definition = ...")
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Gene Name

Os11g0603200

Description

Similar to ABCF-type protein

Version

NM_001074769.1 GI:115486186 GeneID:4350873

Length

3815 bp

Definition

Oryza sativa Japonica Group Os11g0603200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25072652..25076466

Sequence Coding Region

25072755..25073576,25073759..25074100,25074213..25074353,25074463..25074642,25074867..25075022
,25075111..25075212,25075343..25075471,25075893..25075997,25076103..25076198

Expression

GEO Profiles:Os11g0603200

Genome Context

<gbrowseImage1> name=NC_008404:25072652..25076466 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25072652..25076466 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgccacccatggagctcctctcctccaagctcctccgctcctccctccgcctccccccctccccttccctcccctccccctcctcccgccgcctccgccgccacgcccccatccactgccgcctcacctcctccaccaccaccaccaccacccaagaagagcagtccgccgccgacgacctctcctccctcctctccacctccacctccgacgagccctcctcctcgaagaagaagcggtcgaatagcagcagcggcgcgtcgagcatcccgacgggggtgcggctggagggcatcgccaagtcctacaagggggtgaccgtgctcagggacgtttcttgggaggtgcagcgcggcgagaaggtcggactcgtcggcgtcaacggcgccggcaagacgacccagctccgcatcatcgccggcctcgaggaccccgacgccggcgccgtcgtcaaggccaaggacaacatgaggatcgccttcctcagccaggagttcgaggtgtgcgcgtcgcgcaccgtcagggaggagttcctcgccgcgttcgaggaggagatggaggtgaggtcccgcctggagaaggtgcaggccgcgctggagggcgccaccgaggacatggacctcatggggcgcctcctcgacgagctcgacctgctgcagcggcggtcgcaggacgtcgacctcgggatggtcgaggtcaagatccagaagctcatgcccgagctcgggttcgctcccgaggacgccgaccgcctcgtcgcctccttcagtggtgggtggcagatgaggatgtccctcggcaagattcttcttcaggatcccgatttgctgctgctcgatgagccgaccaatcacgtcgatttggacaccattgagtggctggagagttacctcaagacgcaggaagtgccgatggtcatcatttctcatgacagggctttcctggatcagttgtgtaccaagatagtggaaactgaattcggcgtgtccaaaacgtacaagggaaactattcggaatacgttttggcgaaggcgatttgggtggagactcaatatgccgcatgggagaagcagcagaaggagattgagcagacaaaggaactgataaacagacttggggctggagttaacgcagggcgtgcatcgagtgagcagaagaaattggaaaagcttgaaaaggaaggattgattgagaagcctttccaaaggaagcagttgaagatcagatttccagagcgtgggcaaagcggtagaactgtattgacaataaggaatctcgaatttggatttggggaagagaaattgttcaataatgcaaatctaatagttgagagaggtgaaaagatagccataattggccccaatggatgtgggaaaagcactttacttaagcttattttggggatggagaagacacaaggaggcgaagtacttcttggggagcataatgtattgcctaattatttcgagcaaaatcaggctgaagcacttgatttggagaaaactgtgctggatactgtagcagaagcagcagaggattggaaaattgatgatatcaaaggtctccttggtcgttgcaattttagggatgatatgttggatagaaaggttcaattcttaagtggtggagagaaggcgaggcttgccttctgcaagttcttggtgactccatctactttattgatattggatgaaccaacaaatcaccttgatattccatcgaaagaaatgcttgaggaggcaatttcagaatacacaggcactgttataacagtttctcatgaccggtatttcgtaaagcaaattgttaacagagttattgaagtgaaagatcagactattcaggactatcaaggagattacaattattaccttgaaaggaatcttgaggccagagagagggaacttgcacgtgaggaagagctcgaggagaaagcccccaaagtaaaggccaagtcaaaaatgtcaaaggcagagaaaattgccagaaagaagcagaagatgcaggcattccagcaaagcaagcaaaaatcgaaatcgctgaaaaacgcgaagaggtggaagtga</cdnaseq>

Protein Sequence

<aaseq>MAAPPMELLSSKLLRSSLRLPPSPSLPSPSSRRLRRHAPIHCRL TSSTTTTTTQEEQSAADDLSSLLSTSTSDEPSSSKKKRSNSSSGASSIPTGVRLEGIA KSYKGVTVLRDVSWEVQRGEKVGLVGVNGAGKTTQLRIIAGLEDPDAGAVVKAKDNMR IAFLSQEFEVCASRTVREEFLAAFEEEMEVRSRLEKVQAALEGATEDMDLMGRLLDEL DLLQRRSQDVDLGMVEVKIQKLMPELGFAPEDADRLVASFSGGWQMRMSLGKILLQDP DLLLLDEPTNHVDLDTIEWLESYLKTQEVPMVIISHDRAFLDQLCTKIVETEFGVSKT YKGNYSEYVLAKAIWVETQYAAWEKQQKEIEQTKELINRLGAGVNAGRASSEQKKLEK LEKEGLIEKPFQRKQLKIRFPERGQSGRTVLTIRNLEFGFGEEKLFNNANLIVERGEK IAIIGPNGCGKSTLLKLILGMEKTQGGEVLLGEHNVLPNYFEQNQAEALDLEKTVLDT VAEAAEDWKIDDIKGLLGRCNFRDDMLDRKVQFLSGGEKARLAFCKFLVTPSTLLILD EPTNHLDIPSKEMLEEAISEYTGTVITVSHDRYFVKQIVNRVIEVKDQTIQDYQGDYN YYLERNLEARERELAREEELEEKAPKVKAKSKMSKAEKIARKKQKMQAFQQSKQKSKS LKNAKRWK</aaseq>

Gene Sequence

<dnaseqindica>104..925#1108..1449#1562..1702#1812..1991#2216..2371#2460..2561#2692..2820#3242..3346#3452..3547#ccctcccatttgggcttttatttttgtgtggtgtggccactccctcctccacccaaacccctcttcccccaacccaacctctcgcgcgcgaggagctccatccatggcggcgccacccatggagctcctctcctccaagctcctccgctcctccctccgcctccccccctccccttccctcccctccccctcctcccgccgcctccgccgccacgcccccatccactgccgcctcacctcctccaccaccaccaccaccacccaagaagagcagtccgccgccgacgacctctcctccctcctctccacctccacctccgacgagccctcctcctcgaagaagaagcggtcgaatagcagcagcggcgcgtcgagcatcccgacgggggtgcggctggagggcatcgccaagtcctacaagggggtgaccgtgctcagggacgtttcttgggaggtgcagcgcggcgagaaggtcggactcgtcggcgtcaacggcgccggcaagacgacccagctccgcatcatcgccggcctcgaggaccccgacgccggcgccgtcgtcaaggccaaggacaacatgaggatcgccttcctcagccaggagttcgaggtgtgcgcgtcgcgcaccgtcagggaggagttcctcgccgcgttcgaggaggagatggaggtgaggtcccgcctggagaaggtgcaggccgcgctggagggcgccaccgaggacatggacctcatggggcgcctcctcgacgagctcgacctgctgcagcggcggtcgcaggacgtcgacctcgggatggtcgaggtcaagatccagaagctcatgcccgagctcgggttcgctcccgaggacgccgaccgcctcgtcgcctccttcagtggtgggtggcagatgaggatgtccctcggcaagattcttcttcaggtacagataaaaaagaaaatttgagctctacatgtagcaatcaatggttgtcatattgtgatggagagaaaaatgagtggtattatggccaattggtgatgaatttggtctggattgttgaatttgaattgtagtttttagtgtctgtgtgcatttccaatgctgaaattgattgtgtgcaggatcccgatttgctgctgctcgatgagccgaccaatcacgtcgatttggacaccattgagtggctggagagttacctcaagacgcaggaagtgccgatggtcatcatttctcatgacagggctttcctggatcagttgtgtaccaagatagtggaaactgaattcggcgtgtccaaaacgtacaagggaaactattcggaatacgttttggcgaaggcgatttgggtggagactcaatatgccgcatgggagaagcagcagaaggagattgagcagacaaaggaactgataaacagacttggggctggagttaacgcagggcgtgcatcgagtgagcagaaggtaaccactacaattgcatgattgcggcatgcttcagatcaatacaatctatctcttatttcagccatctgtcattacttactaataacttttgtctaatttcaaacactagaaattggaaaagcttgaaaaggaaggattgattgagaagcctttccaaaggaagcagttgaagatcagatttccagagcgtgggcaaagcggtagaactgtattgacaataaggaatctcgaatttggatttggggaagaggttaggttcattctattggaaactgtttcagagtcaatttctttttgattaaccgtaccccaactatttgtattaatgctcttaattcctcctttggtatcatctccagaaattgttcaataatgcaaatctaatagttgagagaggtgaaaagatagccataattggccccaatggatgtgggaaaagcactttacttaagcttattttggggatggagaagacacaaggaggcgaagtacttcttggggagcataatgtattgcctaattatttcgagcaaaatcaggtacaccaaatccctgaaatggatatcctttctttcactatggtttcatcatgacagtaatactgtacagtagtatatatttgattttcactgtttgattaagctatcaggtcaagtggttgtaagcctattgattaattgcagcgcatcatcaacctttcattatttcagtagtaaaaaaatatttttttcctgactagattcatgtacatgatctttaccaggctgaagcacttgatttggagaaaactgtgctggatactgtagcagaagcagcagaggattggaaaattgatgatatcaaaggtctccttggtcgttgcaattttagggatgatatgttggatagaaaggttcaattcttaagtggtggagagaaggtaatatacgtttgccagtgaatttcttttatttgtatgatgtagtgttactgtatatttactcacaatttatctgttatttccccaggcgaggcttgccttctgcaagttcttggtgactccatctactttattgatattggatgaaccaacaaatcaccttgatattccatcgaaagaaatgcttgaggttagatgcaattctcgtatgttaaaaaaattgtaatgcagttctcctgcatagcaaaacttttttcttatgatccatcagttccttgtttagcatgtacttacagtaaatgcttgtgtgtgcatggcaggaggcaatttcagaatacacaggcactgttataacagtttctcatgaccggtatttcgtaaagcaaattgttaacagagttattgaagtgaaagatcagactattcaggactatcaaggagattacaatgtgagttatcctgtgatataagttactcaatattactttgcaacctgtatttgctgtattcgagtgaaatatggttaactcttcttgattataatagtttcccatagtgcagcaacataatctatagttttctccacataatccgaattaaatgcttcatcttatataaaaactcttacctcatcacgtgccaaactagtgctcagtaaaagatatagattcaggccaccaagatatagatcataattatcccagtaacttcagcaatactaatggtagaaatcaagatataaatcctacagagggccagaggcatcacaaaaaacagaggggagtctgaatttttcatattagggtgccggaacactgaaaaatactggaacacccagaaatgatgttattttcttctttgtgtttgcagtattaccttgaaaggaatcttgaggccagagagagggaacttgcacgtgaggaagagctcgaggagaaagcccccaaagtaaaggccaagtcaaaaatgtcaaaggtgaatatctctactgtcttttcacgatgtgaatttggatgcgaactacaattaattgggtttagcttctataactgacagttcttttttctaactgtaatacaggcagagaaaattgccagaaagaagcagaagatgcaggcattccagcaaagcaagcaaaaatcgaaatcgctgaaaaacgcgaagaggtggaagtgagaatcctgattcatggtatcatccacggtgccatacacctcatttgcgacaccagtgacaaggcaggcgcatggcctgctgtaatgctattatactccatatatcactagcaactggtgtacatacatcagaaaggaagtaatcctagcagtagcatcataggaggaccaaatgctgtaactaaagcaggaaatgatacatgaccttgtacataatgcaggcagtttctgatggaggcatgctttattttgtatcaagtagcaatacc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0603200, RefSeq:Os11g0603200