BGIOSGA022596

From RiceWiki
Revision as of 13:20, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022596| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022596, complete gene.| tag = OsI_222...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022596

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022596, complete gene.

LocusTag

OsI_22282

Ensembl Transcript ID

BGIOSGA022596-TA

Ensembl Protein ID

BGIOSGA022596-PA

Length

2601

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7978836..7981436

Sequence Coding Region

7978836..7978887,7979197..7979309,7979391..7979519,7979639..7979741,7979859..7979933
,7980027..7980109,7980448..7980520,7980612..7980868,7981221..7981436

Genome Context

<gbrowseImage1> name=IndicaChromosome06:7978836..7981436 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:7978836..7981436 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCAGTGCTTTGCTTTGTCACCCTCCTCGCCTTCTGTTTCTTGGCGCCGGCGGCGTTGATGTTGGGGTATTACCACGGCTCGCCGGAGCTAGTCGTCGTCGGCTCAGGTTGCTCGAGGCTTGTGGAGACGAACTCGTTCTTTGTGCAGGACATCAAGGCAAGGACGGAGGGAGGGTCGCCAGAGAATGGGTTGGTGCTCTACGGGATGCCGGTCGCTCCGCCTCTCGGCGTCCCAGCCGCTTGGTCGGAGGCTCGCCGCGCCGTCGTACCAGCCAATTCTCACATGGAATGGGTGTATTTCCTTAACAGAGGATCGGAGATAGAAGTAGCTTACAGCGTCAGGAGTGAAACTGAATCGTCTCGTCCAATCTGCATGATCATTGCGCGAGGCAAAGAAAGCTTCTTGCAATGGGCTGAGAATCCATCAGCAAATGAGACCACATTATCTTGGCACTTGGTGCACGGAAATGGAACAATCAAGCAGACTATCAATCTCTCTTCAGAGTACTTCATTGCCTTGGGAAACTTTAACAATCAGGATGTAACGGGACTGAATTCTGATGGTCATTATGTGAAGCTGTCATATGGACCTCGCTGGATAGTGTACATCATCGGATTAGTTCTGTTGGCTGTTGCACTGCTGATCATGTACGATATACTGAACATGCTGTTCGGTCCCGGGCCTGGAGGAGGAGACGCGAGAGCCTCGCTGCTGTCGTCGTCGTCGGCGGCGGCGGCGAGCAAAGAGGAAGACGACGCGAGCCTGGGGTCGTCGTACGACTCCGTCTCGCACGACGGCGACGGGGAAGACGACGACGACGACGTAGAGGAAAGAGGCGGCGACGGCGGCGGCGGCGAGGGGCGGCACCTATGCGTGGGTGGCAGAGGAGGACGGGAGCTGCCCGTTGTGCCGGAGGAAACTGAAGAAAGTGAGGAGGATCTTCTCCGTCTGAGCTGTCCGCGAGCTCAAGCATGGGGTTTCTCCGAACCAGTGGAGCGGAGACGAGAGAAAAAAAATGGAATGGACGCCCACCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCGACTGAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAVLCFVTLLAFCFLAPAALMLGYYHGSPELVVVGSGCSRLVETNSFFVQDIKARTEGGSPENGLVLYGMPVAPPLGVPAAWSEARRAVVPANSHMEWVYFLNRGSEIEVAYSVRSETESSRPICMIIARGKESFLQWAENPSANETTLSWHLVHGNGTIKQTINLSSEYFIALGNFNNQDVTGLNSDGHYVKLSYGPRWIVYIIGLVLLAVALLIMYDILNMLFGPGPGGGDARASLLSSSSAAAASKEEDDASLGSSYDSVSHDGDGEDDDDDVEERGGDGGGGEGRHLCVGGRGGRELPVVPEETEESEEDLLRLSCPRAQAWGFSEPVERRREKKNGMDAHRGARTHDHKVKSLALYRLS</aaseq>

Gene Sequence

<dnaseqindica>1..52#362..474#556..684#804..906#1024..1098#1192..1274#1613..1685#1777..2033#2386..2601#ATGGCGGCGGCAGTGCTTTGCTTTGTCACCCTCCTCGCCTTCTGTTTCTTGGGTCAGTTACTCCGAATCTCTCTGATCGACAACACATAATATGGCTGTGTTATTCCTTCCATTTTCCTAACCCACCTCTCTCGTTTTCCGCACGTACGATTTTCAAATTGATAAATGGTATGATTTATAAAAAACTTTCTATATAAAAGTTGTTTTAAAAAATCATATTAATCTATTTTTTAAAAAAATATTATTTAATACTTAATTAATCATGCAATAATACGAGCTTCACTTTGCGTGCTGGGAAACCCGAACACGGCCTATGTCTCAGTGCTATAACTCGCTTTGATCCTTTACATTGATGGAACAGCGCCGGCGGCGTTGATGTTGGGGTATTACCACGGCTCGCCGGAGCTAGTCGTCGTCGGCTCAGGTTGCTCGAGGCTTGTGGAGACGAACTCGTTCTTTGTGCAGGACATCAAGGTGATCATCCTCCCGTAGCTCGGTTCTGCACGAGCTCAGTCAGGACGAGTGTTTTAATGTGTGCACTCGCTCCTCTTGCAGGCAAGGACGGAGGGAGGGTCGCCAGAGAATGGGTTGGTGCTCTACGGGATGCCGGTCGCTCCGCCTCTCGGCGTCCCAGCCGCTTGGTCGGAGGCTCGCCGCGCCGTCGTACCAGCCAATTCTCACATGGTAATGCTAAGTTATCATCTGTGTGATTCTGTTTGAAACTCTGAACTCATGATCATGTCAGTTATTTTCAGAATTGAAGATTAGTTGCTACTTACTATACTCCATGTTGTGTGCTGCAGGAATGGGTGTATTTCCTTAACAGAGGATCGGAGATAGAAGTAGCTTACAGCGTCAGGAGTGAAACTGAATCGTCTCGTCCAATCTGCATGATCATTGCGCGAGGTAAGAAAGGTTCAGATATATGAACAAGTGTGTTTAAATGTGATTTTTTCATATCAGTAACAGAGTTTCACTGACACCATTAAAATTCTTGCGTGTTGGTGCTTCACTGCTTCATAGGCAAAGAAAGCTTCTTGCAATGGGCTGAGAATCCATCAGCAAATGAGACCACATTATCTTGGCACTTGGTGCACGGTAAGCATGATCTCATTGACTAAGAATCAGTTGCAGACTTGCAGTACCCCGGGAGAATCCGTATACTAATGCTATCAGGATGTGTAATCACAGGAAATGGAACAATCAAGCAGACTATCAATCTCTCTTCAGAGTACTTCATTGCCTTGGGAAACTTTAACAATCAGGATGTAACGGTAAATTACCCCGTGTCAAGAGCGACAGAGCTTCCAAAATGTTTTTGTGGCATCTTCAGCCTTGTTACAGAGGTTTCATCTGGCAGGTGCTACTGGAATTCAGAATCAGGACCTTGTTCTACAACACCAGCGCAGCAGATTATACATGCTCACCGGCCAGCTCTCTTTGCACTTACAAACTGCCGTTTTTAGGACAAAACGTTGTGGTTCTGTCATCCGGCCCCAAAGAGGTGACAAAAAGCGTCTTCTCTGTCATCTTCAGATTCCTCTCGTATACTGTACAATGCTCACTTTAGCCGGATGCAGTACTGACTAGTCTAGTGCACAATTTCATTCAGGGACTGAATTCTGATGGTCATTATGTGAAGCTGTCATATGGACCTCGCTGGATAGTGTACATCATCGGATTAGGTACCAACTCAATAATCACCTACAAGAAGAACCTCTCAAATTAATGGTAGGATTGACTGCACACTAAATTATTAATCCCTCTGAATTGCAGTTCTGTTGGCTGTTGCACTGCTGATCATGTACGATATACTGAACATGCTGTTCGGTCCCGGGCCTGGAGGAGGAGACGCGAGAGCCTCGCTGCTGTCGTCGTCGTCGGCGGCGGCGGCGAGCAAAGAGGAAGACGACGCGAGCCTGGGGTCGTCGTACGACTCCGTCTCGCACGACGGCGACGGGGAAGACGACGACGACGACGTAGAGGAAAGAGGCGGCGACGGCGGCGGCGGCGAGGGGCGGCACCTATGCGTGGTGTGCTGCGACGCGCGGAGGGACTGCTTCTTCCTCCCCTGCGGGCACTCCGCCACCTGCCACGCGTGCGGCACGAGGTACTAAACTAAGGGTGTATGGGTGTGTTTAGTTCACGCTAAAATTAAAAGTTTAATTAAAATTGAAACGATGATAAAGTTGAAAGTTTATATGCGTGGAAAAAATTAGAAGTTTGGAACTAAACTCGGCCTAAGTGAGATTATTGTTATCTCACGGTTTAACGGTTATCGTGGTTACAGGTTACCATGAACCGTGGTTATCGTCCGTGATAATTACGATAACCTCAGGGTTTGTAAACCTTATCACCATAAAATTGCAAACGCTGTGGTTGCAGGGTGGCAGAGGAGGACGGGAGCTGCCCGTTGTGCCGGAGGAAACTGAAGAAAGTGAGGAGGATCTTCTCCGTCTGAGCTGTCCGCGAGCTCAAGCATGGGGTTTCTCCGAACCAGTGGAGCGGAGACGAGAGAAAAAAAATGGAATGGACGCCCACCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCGACTGAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022596

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022596&oldid=45121"