BGIOSGA022597

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Revision as of 13:20, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022597| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022597, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA022597

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022597, complete gene.

LocusTag

OSJNBA0080E19.6

Ensembl Transcript ID

BGIOSGA022597-TA

Ensembl Protein ID

BGIOSGA022597-PA

Length

5668

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8036509..8042176

Sequence Coding Region

8036509..8037232,8038097..8038296,8038439..8038619,8039472..8039663,8040109..8040341
,8041154..8041255,8041393..8041443,8041851..8041955,8042078..8042176

Genome Context

<gbrowseImage1> name=IndicaChromosome06:8036509..8042176 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:8036509..8042176 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAACCACGAGCTCGCCTCCACCTCCTCCCCCAAGCGCAAGCCCGGCCGCCGCCCTGGCCGGAAGCCGAAGCCGCCGCCCGCCCCCTCACCCGCCGCCGCCCCCGCCCCCGCCGCCGAAAACGGGACCCACGACCCCGCCTCTGGCCAGAAGCGCAAGCGCGGCCGCAAGCCGAAGCCTCCGGCCGCCGCCGCCGCCGCCGCTTCCTCCGACGGGCACCACCACCCCTCCTCTCCCCTCGCCGCGGCTGTCTCCGCCTCCGACTCGCCCGATCCCGCTTCCTCCCCCGCCCCTCGTGGCCGCGGCCGCAAGTCTCGGCGGGGCCGTCCCGAGCCCCCCTCCGATGCCGGCGCCGCACCCCACGCGCCCCCGTCCCCGCCGCGGCGCGGCGCGAAGAAGGGGGCGGCGGCCAACGCCAAGAAGGCGGCGGCGGAGGTCCCCGTGGTGGAGCCGTTGCGGTGGGAGCAGGTGGCGAAGGTGATGCCGTCGATGGACGCCGTGGTGAAGGTGTTCTGCGTGCACACGGAGCCCAACTTCTCGCTGCCGTGGCAGCGCAAGCGGCAATATAGCTCCAGCAGCAGCGGGTTCATCATTGGTGGGCACAGGGTGCTTACCAACGCTCACTCCGTCGAGCACTACACCCAGGTCAAGCTTAAGAAGAGGGGATCGGATACCAAATACCTTGCCACCGTTCTCGCTATTGGCACCGAGTGTGACATTGCAATGTTAACTGTAGAGGATGATGAATTCTGGAAAGGGGTTTCACCCCTAGAGTTTGGATCTTTGCCTGCACTTCAAGATGCTGTGACTGTTGTTGGTTACCCAATTGGAGGAGACACGATCTCAGTCACAAGTGGTGTTGTATCTAGAATAGAGATACTTTCATATGTTCATGGTTCAACGGAGCTTCTAGGATTGCAGATAGATGCAGCTATAAATTCAGGAAACTCTGGGGGCCCTGCTTTTAATGATAAGGGCAAGTGTGTGGGCATAGCTTTTCAATCTCTTAAACACGAAGATGTAGAAAACATAGGCTACGTCATACCCACCCCAGTGATTAATCACTTCATTCAAGACTACGAAAAATCTGGGGAGTACACAGGTTTTCCTATACTTGGAATAGAATGGCAGAAAATGGAAAATCCTGATCTCCGAAAGGCAATGGGAATGAAATCTGACCAAAAGGGTGTTCGTGTCAGAAGGGTTGAGCCAACCGCTCCTGAATCTGGATGCCTGCAACCTTCTGATATAATTCTAAGCTTTGATGGCATTGACATTGCCAATGACGGTACAGTTCCTTTCAGACATGGGGAGCGTATTGGCTTCAGCTACCTCATTTCGCAGAAGTACACTGGCGAGAAGGCCCATGTCAAAATTCTGCGGAATTCGAAAGTTCTTGAATTTAACATTAAGCTGGCAACTCACAAAAGACTCATTCCAGCTCATATAAAGGGCAGGCCACCATCATATTACATTGTTGCAGGCTTCGTTTTTATGGTTGTTTCTGTTCCATATCTCCGATCTGAGTATGGAAAAGACTATGAGTATGATGCCCCTGTCAAGTTGTTGGACAAGCACTTACATGCAATGGCTCAATCACCTGACGAGCAGCTTGTGGTGGTGTCACAGGTTCTTGTAGCAGATATCAACATTGGTTATGAAGAAATTGTCAATATTCAGGTTCTTTCTTTCAATGGCAAACCAGTAAAAAATTTAAAGCACTTGGCAACCATGGTGGAAGATTGTAACGAGGAATACTTAAAATTTGATATGGACTACGATCAGCTGGTTGTTCTTGAGGCAAAAACGGCAAAGGCTGCTACTCAGGATATTCTGACAACGCATTGTATACCTTCCGCAATGTCAGAAGATTTGAGGACTTGA</cdnaseq>

Protein Sequence

<aaseq>MDNHELASTSSPKRKPGRRPGRKPKPPPAPSPAAAPAPAAENGTHDPASGQKRKRGRKPKPPAAAAAAASSDGHHHPSSPLAAAVSASDSPDPASSPAPRGRGRKSRRGRPEPPSDAGAAPHAPPSPPRRGAKKGAAANAKKAAAEVPVVEPLRWEQVAKVMPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGHRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWKGVSPLEFGSLPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVINHFIQDYEKSGEYTGFPILGIEWQKMENPDLRKAMGMKSDQKGVRVRRVEPTAPESGCLQPSDIILSFDGIDIANDGTVPFRHGERIGFSYLISQKYTGEKAHVKILRNSKVLEFNIKLATHKRLIPAHIKGRPPSYYIVAGFVFMVVSVPYLRSEYGKDYEYDAPVKLLDKHLHAMAQSPDEQLVVVSQVLVADINIGYEEIVNIQVLSFNGKPVKNLKHLATMVEDCNEEYLKFDMDYDQLVVLEAKTAKAATQDILTTHCIPSAMSEDLRT</aaseq>

Gene Sequence

<dnaseqindica>1..724#1589..1788#1931..2111#2964..3155#3601..3833#4646..4747#4885..4935#5343..5447#5570..5668#ATGGACAACCACGAGCTCGCCTCCACCTCCTCCCCCAAGCGCAAGCCCGGCCGCCGCCCTGGCCGGAAGCCGAAGCCGCCGCCCGCCCCCTCACCCGCCGCCGCCCCCGCCCCCGCCGCCGAAAACGGGACCCACGACCCCGCCTCTGGCCAGAAGCGCAAGCGCGGCCGCAAGCCGAAGCCTCCGGCCGCCGCCGCCGCCGCCGCTTCCTCCGACGGGCACCACCACCCCTCCTCTCCCCTCGCCGCGGCTGTCTCCGCCTCCGACTCGCCCGATCCCGCTTCCTCCCCCGCCCCTCGTGGCCGCGGCCGCAAGTCTCGGCGGGGCCGTCCCGAGCCCCCCTCCGATGCCGGCGCCGCACCCCACGCGCCCCCGTCCCCGCCGCGGCGCGGCGCGAAGAAGGGGGCGGCGGCCAACGCCAAGAAGGCGGCGGCGGAGGTCCCCGTGGTGGAGCCGTTGCGGTGGGAGCAGGTGGCGAAGGTGATGCCGTCGATGGACGCCGTGGTGAAGGTGTTCTGCGTGCACACGGAGCCCAACTTCTCGCTGCCGTGGCAGCGCAAGCGGCAATATAGCTCCAGCAGCAGCGGGTTCATCATTGGTGGGCACAGGGTGCTTACCAACGCTCACTCCGTCGAGCACTACACCCAGGTCAAGCTTAAGAAGAGGGGATCGGATACCAAATACCTTGCCACCGTTCTCGCTATTGGCACCGAGTGTGACATTGGTATGTATAGCCCACACTCGTGCGACTTTACTAGGACTATGGACTAGTTTTTGGCAATCGGAATCCTTGCAATGTTTGGTAAAATGGCAATGTCCTGTGAAACAGATTGAAAACTGCAGATGTGCACTGCTCATAAAATAGCTAGAAACACTTGCTATTTACTATTGCAGATTTTGTATGTTCGGTTGTTTTACAAATCTTCACGTTGGCATACCAGAAATCCAGATTAGTCAGGTTTAGCATTGTAATCTTTTTATTTATGTTCACTCTAATCACAAAGGTTTGAGTTCGATGATACCATTTCAACAGATTTGGTCATCACATGGAGTAGTGTGATAATAGGTGGCAATCTAGATTGGACAGAGTGCGTATCAAGCTTGTGTAGAATGCCTTGTGATATTTTTAACAGGATAGGGAATGATAAGGAGTAGCTAAAGTAATGCCACATAACTTTAGGGATAGCAACTAAATCTCATGTGCCCTTTCTTGTTTATTTAAGGCTTTACGGTTGCTTCGTTGCACATAAATGCACAGTTGTGAAATTGTTATAGTACTTGTGCAAAAGAAATCCAAAAGCTAGTGCTAATTTGAGCGCTTGATGGTGATTACAAGTGAACAATATTCTATTATTCTTGGTCTAATGTTATCAGGAACCTGCCTATGTGGGTTATTATTTTGGAGGTACTGGGTCGATCGTTTGGAAGTTGCCCTGACCTAAAAAAATTCAAGGGCAGGAGTCAAATTGTATTATTCAAGCAATTTATTATTAAATTGCAAAGATTTGCCTGTCAATTTATTGTTTAATAATTCAAGAAGTTAGCTTTCTTATGTTATTTGATAATTAATATAACCTTTCCATTTCAGCAATGTTAACTGTAGAGGATGATGAATTCTGGAAAGGGGTTTCACCCCTAGAGTTTGGATCTTTGCCTGCACTTCAAGATGCTGTGACTGTTGTTGGTTACCCAATTGGAGGAGACACGATCTCAGTCACAAGTGGTGTTGTATCTAGAATAGAGATACTTTCATATGTTCATGGTTCAACGGAGCTTCTAGGATTGCAGGTTTTTCTCTTAAGATCTTTGCATGCTTTTGATTGTCTATATTTTGCATATTGTAGACATAGTTTTTACTTCTCTTTGGAATTATTTCTAATAATCTCTTAACCTGGGAGCATACTTAAGTTTTCACTGTTTCATGGAACAGATAGATGCAGCTATAAATTCAGGAAACTCTGGGGGCCCTGCTTTTAATGATAAGGGCAAGTGTGTGGGCATAGCTTTTCAATCTCTTAAACACGAAGATGTAGAAAACATAGGCTACGTCATACCCACCCCAGTGATTAATCACTTCATTCAAGACTACGAAAAATCTGGGGAGTACACAGGTAAATCTTTATATTCTTAGCGTATGAAATTTAGTTCTTTGGGAGTTAAACTTAAGGGGGCACATGTGATGGCACATGAATGGAAAATGGATGCTCGTTGCACAGAAACATGCTTATTTAGATGCATGTGCAGATGTTTTATGTTACTTTTAATGTGAACAAGTTATCCACATGTTACCGTGTAACATAAATTGTATTTAAGGGGAAATTGGCGTATTTGGATGTTTTTATCCGTTCTATCAGCTTCCATGGCATTATTGTTTCAAGACTTAAGCACTTATACTTTGCATAGATGAGGGGGATGATTCTTGACATGTGCGTGCATTTGGAATCTCTATGAACTTTGAAATCACCACTCTTCAACATATGTACACAAATCTCTTGAGATGTGGTACTTATAATTTGAGCTTTATCACTAGATTAACACTGTCCGTTCATCTAGCTGTGTATTTTGTGCAAGTAAACATATTAGCAATCACAAGAGTTAATTATTGTTCTTGCTCTGGCATTATCAACACCTCAACAGGTATTGTTCTTGAGATCTTACAATTCAGGCTAATCCATCATATTAGAATGTATTTCAATAACCCACCATACCTTCATTGACTGCATGCATAGATTGTGTGTTTTAGTTTGATACAGCTACAATAGTGCAAAACTTCAGTTAAAACTGGTTTGAATAGTTTAGTTATGCATATTTATGGTTGCTTGTCATTGATCTTCTGATGCACATAGGGCGTTTTTTCTTAAAAAAAATGTTTTGTGGTAATCCTTTTTCCATTATTAACTTCACATCTATGATATTCTGATTTTCCATGCTATTTGCTTGTTATTTCCTTTATTCTTTTGCAGGTTTTCCTATACTTGGAATAGAATGGCAGAAAATGGAAAATCCTGATCTCCGAAAGGCAATGGGAATGAAATCTGACCAAAAGGGTGTTCGTGTCAGAAGGGTTGAGCCAACCGCTCCTGAATCTGGATGCCTGCAACCTTCTGATATAATTCTAAGCTTTGATGGCATTGACATTGCCAATGACGGTACAGGTTAGTCAGAGCTTTACACAACTAGCGATTATTTCTACTGCTTTTGTTTTAGAACTTGTTTGCCTTGGCCAGTTATTCTTGTATCTATTTGGGAGCATGCATTCTAGGACACTCTGTTTCATGCAAGAGAGATTCCATTGTCTCAGGTTCAACTTCTAGTCCCCACTCCCTGTGCCATTTCTAGATTATTTGGTTCTGGAAGGATTCGTTCTAAGCGGGGTTATTGAATGGAGATCTCCACTGACCATAAATGACATCATTCAACGTGCACGTATTGTCTAGCACAAAGCATTGGGATTTTTCTTCTTTAAAAGTCTGCTGCATGTCTTAGTTCTTGTCATCTGTTATTACTAGTTCTCCAAATGGTTTGTCTCCAATGTAGCCTACGAAGTATGACTTAAGGAGGAGAGTATTGGCTTACATTTTGTTTATCTTGGTTATCCAGTTCCTTTCAGACATGGGGAGCGTATTGGCTTCAGCTACCTCATTTCGCAGAAGTACACTGGCGAGAAGGCCCATGTCAAAATTCTGCGGAATTCGAAAGTTCTTGAATTTAACATTAAGCTGGCAACTCACAAAAGACTCATTCCAGCTCATATAAAGGGCAGGCCACCATCATATTACATTGTTGCAGGCTTCGTTTTTATGGTTGTTTCTGTTCCATATCTCCGATCTGAGGTATGCTGTCATCTCCCTTGTCCAGCTTTATGTGTGAAATAATAATCAAGATATTACATCCTTGTTCAGTTGTCAATTTTTCATTCTACTACTGTACGATGTTCAGTACAATTTTGTTGCATTTTTGGAAAGCTTGATCTTAATTGTAATTTTCATCTTTAACTTATCTCTTTATTTTTTAAATTGAATATATATATATACCGCGTGCTTAGTCTTGTATATGTATTTTGTTAACAGACTTTCACAAACCTTATATATTATCGTCAACTTATTTTATTGTAGTGATTTAGTATTTCTGTTTGTGCTCTGGTGTGTGTGAAAACATGGATAATTTTTAGTCATGTTCACAAATATCAATGACTATATGTTTCACGCGTCATTTTCACCAACCTTGTAGAAGGAAGCGATATTGCCACCTGAATGACATCTTTCAAATGTCTGTTCTATGTTGGACTACTAGTTGCTTATCCGATTTTGGTTGAAAATGTTGACATGAACCTGTCATTTCTGGACTTTCAACATTTAACACATGTAGCTAGAGTGTACGATCAATAATCTGTGTCACAATATATTGGTCGGTGGCAGACAGTCCATTTTCCCCAGAAGATTCCTTTATTAGCATAGTTTATTTTTGTGGAGCAGTTCTCTGCAATTTACTCATTTTTTTTTCAAGAACCACTCATGTAGGTTCTCATCATCCATGACTGCTAGCACAACACATTTGTTTTTCTTTTCATGTCCAAATTGCTGCAAAAAGTTGTAAGTTCGAACTTTTTGATAATACAGAACTAACTACAATCTTATTTCATCAGTATGGAAAAGACTATGAGTATGATGCCCCTGTCAAGTTGTTGGACAAGCACTTACATGCAATGGCTCAATCACCTGACGAGCAGCTTGTGGTGGTGTCACAGGTCTCAAGTTCTTTCTGTACTAACCTATGTTTTTATGTTATAAATGAGATGGCTAACCTTTCTTGCTTTTATTTAGAGCTTGGTATTTATTATTTCATCATATGACAATTTTTTGAAAAAAAATGATGAATTTTCAGGTTCTTGTAGCAGATATCAACATTGGTTATGAAGAAATTGTCAATATTCAGGTAACAATGATCACTACTGAAAGTATTTTTATGGTTTGAGATTTATTTTCACAAGTTATCATATATATACTCCATACCAGAAAAGGGTGTTCTTCAACTGACCGTATCAATTGCACTACACCGGTTCATATTTTGAATGATGCTGATCAGAATTGGTTGTCTCCAACTGCTGTTATATATATTAGCTAAGTTAACAGCCATAAGCAGTATTCTGTTTGAAATTGGTGGAAATAAATCTCAGGAGGGAACTAACAACATTGGTAGTTAGTTACCAAGTGTAATGGACATTTTATTGTTCTGATTGCTATATTTGACTATCTAAGAGTAGTAGAAGACCAAAATTTTCTGAACAAAATTGCCTTTGATGTGTTAAATTAATTGTGTTTTACTGTTTTTATTCTCTATAGGTTCTTTCTTTCAATGGCAAACCAGTAAAAAATTTAAAGCACTTGGCAACCATGGTGGAAGATTGTAACGAGGAATACTTAAAATTTGATATGGACTACGATCAGGTATCAGATGTGGATTATTAGCGCCCTTTCTCTCTTCCATTGTTCATAGTGAAATTATCATCCTCTTTTGTTCAATGCTACTTCCTGTGAGCACTTTCCAATTGACTGGTATCATCTGGCAGCTGGTTGTTCTTGAGGCAAAAACGGCAAAGGCTGCTACTCAGGATATTCTGACAACGCATTGTATACCTTCCGCAATGTCAGAAGATTTGAGGACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022597