Os11g0604600

From RiceWiki
Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0604600| Description = RINGv domain containing protein| Version = NM_001074772.1 GI:115486192 GeneID:4350877| Length = 3411 bp| Definition...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0604600

Description

RINGv domain containing protein

Version

NM_001074772.1 GI:115486192 GeneID:4350877

Length

3411 bp

Definition

Oryza sativa Japonica Group Os11g0604600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25133593..25137003

Sequence Coding Region

25133762..25133897,25134005..25134090,25134502..25134648,25134741..25134849,25136085..25136208
,25136302..25136575,25136659..25136760

Expression

GEO Profiles:Os11g0604600

Genome Context

<gbrowseImage1> name=NC_008404:25133593..25137003 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25133593..25137003 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggagcagccggcgcggggggcggcgtcgtcggcgtcggagtcgtcgccgctgatcccaccgccgtcggagatcgacatcgaggccggggccggggaccagttccagtgccggatctgcctcgagaccgacgggagggatttcatcgcgccgtgcaagtgcaaggggacgtccaagtacgtccaccgcgactgcctcgaccactggagagccgtgaaggaaggatttgccttttcgcattgcaccacttgtaaagctccttactatttgagggttcatgttcacactgataggaaatggcgaacattgaaatttcgtttcttcgttactagagatatattattcatctttgctctagtgcagtttgtcatatctgcattagcgtatttggtgcattttattgatggattacagaattactggttgaggacagcctgggcatttgacaatgaagttagtttttattacatatgtggggcattgctattttttgctttgcttgggttatcaggatgcttcataacttgttatgaccgaagagtacggaatgacctggcacagccttgtcgagagttatgtctttgttgctgccaaccagggatgtgtgcagattgccatctacctggtacgctttgcatgtggacagattgcactacatgctttgagggctgtgcaacgacagctggagagtgtggtggttgcttgggtggtgctggagaagcagggttaccattgctctttatcatgggagtaatcgtgcttggactattcacagttatcggcattttctacagcgtcttggtagcaaccatggtgggtcagcggatctggcagagacactaccatattcttgcaaaacgaatgttaactaaggaatatgttgtggaagatgtcgatggcgagcgcgcggattggtgtccgccccctctcccttcggagcatgtccaacagctgaagtctctggggcttctataa</cdnaseq>

Protein Sequence

<aaseq>MGEQPARGAASSASESSPLIPPPSEIDIEAGAGDQFQCRICLET DGRDFIAPCKCKGTSKYVHRDCLDHWRAVKEGFAFSHCTTCKAPYYLRVHVHTDRKWR TLKFRFFVTRDILFIFALVQFVISALAYLVHFIDGLQNYWLRTAWAFDNEVSFYYICG ALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCQPGMCADCHLPGTLCMWTDC TTCFEGCATTAGECGGCLGGAGEAGLPLLFIMGVIVLGLFTVIGIFYSVLVATMVGQR IWQRHYHILAKRMLTKEYVVEDVDGERADWCPPPLPSEHVQQLKSLGLL</aaseq>

Gene Sequence

<dnaseqindica>170..305#413..498#910..1056#1149..1257#2493..2616#2710..2983#3067..3168#gctcctcgctagtccaccaccgcacctaacagccgccaacctctccctcgactcgtcgtcgtcggcttcgattcgatcgatcgaggcgaggaggaggaggagctagggtttcggatgggaggaggaggagggttgtagaagcgcgggggcaggctgcggtggatcgtcgatgggggagcagccggcgcggggggcggcgtcgtcggcgtcggagtcgtcgccgctgatcccaccgccgtcggagatcgacatcgaggccggggccggggaccagttccagtgccggatctgcctcgagaccgacggtacgcgcagatccacccccccttccgcccgcgaggcgcgaccttatcgtgcgagggggatctgagtgctttgttggctcggtgcgtgtgtgtgtgggtgtgtgcagggagggatttcatcgcgccgtgcaagtgcaaggggacgtccaagtacgtccaccgcgactgcctcgaccactggagagccgtgaaggtatgaagcttttgatccctcgggcctccccgctgatctcccgcccatttcattggttgcacgttagctgttaataaattgggggagctgctgtttgctgtgcgctgagagaagttggggggttgtggcattcttggtagataagataccatgtttaaacctcatttgttgtgataactaattttagcgttatatgaatgctgtgcctaaaatgtagtttaggtgcgatttgctacaatttaagctatgattcttcataacgtagagtatccagagttgcctttgtcaacatttacgctttcaagatacatattttaattgcacaaaaattggcaggtcaatgttattttgctaagctttgtttcgtaagaaaactaactttgcttggcattttctttgtctcatgtacaggaaggatttgccttttcgcattgcaccacttgtaaagctccttactatttgagggttcatgttcacactgataggaaatggcgaacattgaaatttcgtttcttcgttactagagatatattattcatctttgctctagtgcagtttgtaagtccctctagatactctttgttagttctcgattgtctttattctaatgaatgataaaagagtttgttttttgttatttatttgttcaggtcatatctgcattagcgtatttggtgcattttattgatggattacagaattactggttgaggacagcctgggcatttgacaatgaagttagtttttattacatatgtggtaaattactttatcatatcaaacttgttatttcttgcacttagttttgcatgattgtttgatgaaattgtaccctgattgaaataattatcatgatagttcaccatgcatccatataactcaatcacatgggcgctgtaggttttacaaggttaaatgtgcagtgcgtacacgatgaacctcaatggctcaatcttgtttcatgtatgatgggtgagatgggcttgtaaaaaggaatttaagtgtagaaatgtgatatgagagtgaatgatatatgtatcgaataggaaagagcaagctacttttccctgtttaatgcatggtaattgttgtcacttgaatatgttatagtttgcttgtgacttattcgaggcatgtgtccttcgaaaccaagcacctctgcttctaatttgctataaccctataactaacaagaaactcctgacatgagctgctcatttcacccatttttacattaatgccttcagtttgattaattctgagctcttgctgaaacatcgcaatgaacagttttatagacatctagttaactttgttcggctcaataaataaatgccaataaattaactttgttcggctcaataaataaatgccaattatatcaaccaaactacctgagtgtagctcacatggctggattaatcaggaacacatgttcgttacatggttgagttgttgaactttctttgttaatgaggtgttcacaagtgataaagatgaagattaagtatgggcacgcaaaccaagaaagccattaatacatgattaattgaattttaattattttaaacttgaaaaatggattttatcgaatattttacagcaacttctatatagaaagttttcacacgaagcacaccatttagttgtttgaaaagcgtgctaacggaaaccgagggataatctgcccctttcatcacaaacgaacggagaattgggcaagctaggatattcatctgtatcatagccaagtatgtaaagaagtggatatatgatatgcatgtcgtattctccctactgcgtgaattcattgggctctgttacttatattatgaggaactaagatttgccaattgtgataatagatattatgtggaaaattcatatatactcactaaatctgtgggaagactcgctataagattcaccgtaccttctcttgcgcatattagtttaatctggactaaatttgagtattgttcttatggttacaggggcattgctattttttgctttgcttgggttatcaggatgcttcataacttgttatgaccgaagagtacggaatgacctggcacagccttgtcgagagttatgtctttgttgctgccaaccagggtatgcttcaactaatttagcaattgtattaacaagctactaatgctgcatgcttgtttcatcagcactgctcattgttcttttctgtttcaggatgtgtgcagattgccatctacctggtacgctttgcatgtggacagattgcactacatgctttgagggctgtgcaacgacagctggagagtgtggtggttgcttgggtggtgctggagaagcagggttaccattgctctttatcatgggagtaatcgtgcttggactattcacagttatcggcattttctacagcgtcttggtagcaaccatggtgggtcagcggatctggcagagacactaccatattcttgcaaaacgaatgttaactaaggtgagttctgtttgccgcttatttctcagtctttgactttagtttatttccttctgcacttaagctgtatctggttcttacaggaatatgttgtggaagatgtcgatggcgagcgcgcggattggtgtccgccccctctcccttcggagcatgtccaacagctgaagtctctggggcttctataatctgtagcccatgattataccaatgatgaccttaatttaggacttgcggcactatccagctgtacaggagatgatacaaattaagcggtgaagcaggcgtttcggtttttaagcagccaaatgcacaacaatatcgtttgtctttttttgtacattgtaacaagggaatacctatctgaaaaatgacaacagcatttgatttttatacgatgaatggtttcacagttttatttcgatgagctc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0604600, RefSeq:Os11g0604600