BGIOSGA022616

From RiceWiki
Revision as of 13:20, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022616| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022616, complete gene.| tag = OsI_223...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022616

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022616, complete gene.

LocusTag

OsI_22351

Ensembl Transcript ID

BGIOSGA022616-TA

Ensembl Protein ID

BGIOSGA022616-PA

Length

4832

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8536323..8541154

Sequence Coding Region

8536323..8536595,8536714..8536941,8537054..8537183,8537486..8538033,8538870..8539252
,8541058..8541154

Genome Context

<gbrowseImage1> name=IndicaChromosome06:8536323..8541154 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:8536323..8541154 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCCCCGCGCCGAAGGCGGAGCCCCTGAAGCAGCGGGTGAACCGGTGCCTGCTCCGGCTGTCCGACCGCGACACGGAGGCCATGGCGGCCGCCGAGCTGGACGGGATCGCGCGCGGGCTGGAGGCCGACGAGCTCCCTGCGTTCCTCGCCGCGGTGTCCGACGCGCGCCCCACCGACAGGACGCCGCTGCGGCGGCACTCGCTCCGGCTGCTGGCGCTCCTCGCCGCCGAGCACCCGCGCGACGCCGTGGAGCCGCTCGTCCCCAGGCTCGCCAAGCCGGAGCTCATCTCCATCATCGGCGCCGCCTCGGCCGCCTCCGGCGGCGGCGCCGCGGCCACCGCGGTGCCCTCGCTACGCGACGCGCTCACCGGCGAAGACTGGGCGGCGAGGAAGGCCGCCGCCGAGGCGCTCGCGCTGTTGGCGCTGGAGCACGGAGACAACCTCGTCGAACAGAAGCCATCCTGCATTGCCGTCTTCGAGGCCAAGAGATTCGATAAGGTGAAGATTGTTCGGGAGTCGATGAACCGGATGATTGAGGCGTGGAAGGAGATCCCAGACATGGACGAGGAAGTATGCTCCTCCGACGTGCCGCCATCTCCGCAGTCGCAGACGAGATCTTCTAGCACAGACTCTGCAAGTGATGGACGATACCCAGCTGATTCCCTTGGCTCCAACTCTGTCCAGTCAGTTAGGAGGAGGAACTTATCACCGACAAAAAAATCACCCCCAAGGGAAGCATTGCACAATGTCAGCAACAGAAGGACCAGCAGTTCTTCCATCGGAAACAAGAAGAACTCACCGCCGTCACGCCACAATTCAGGCCAAGCCAAGAACTTTGAGTGTAAGGTTAATGTGACTGATGCTCCGGATGCGACCCCGATCAAAACCGTGACCGAGGAGAAGCTTCTGAAAGATGGCAATGTTAGAGCAAGGCTTGAGGCGCGGAGGGTACTGTTCCAGAAGAATGGTGAGGAGAGGTACAACAAGGTTCCTGGGCTCAAGTCAGGGTCTAGAGTTGTTCCATACAATGGGGACGATGACTCGGAAGAGATTGCGGAGTCTGAGGATGTGCATGAGGAGTTTCAGTCAGGTCACAAGGAAGAGGACCTGTCAAAGATCAGGATGCAGCTTGTTCAGATTGAGAATCAGCAGACCAGCTTGCTCAATCTTCTCCAGAAATTTATGGGGAGCTCTCAGAATGGGATCCGTTCCTTGGAGACACGGGTGAACGGACTGGAGATGGCACTGGATGAGATCTCCCGTGATTTGGCTGCTTCTTCAGGAAGGATGCCAAGCAGTGAACCTGATATGAACTGCTGCATCCTTAGCCCGAAATTCTGGAGAAGACATGATGGCAGTAGATACTCATCCAAGTACTCCATCTCCGACATAGCAAACTACTCCGAGGAGAGCAGAACTTCTTACAAGTGGGAGAGGCAGAAGTTTGGAGTTCAGGGTGTTGTCACCAACCCATTAGCAGAGCCAAACGCTTCATTCGCAGGAAACACGGTTGTTGCTCAGGAAGCCAGGAGACAGAATTCAGCTCAATATAAGTCAAGGAGGTGGTGCCATGGTGACCACCCGAGGGCTGCGAGGACAGCGAGTAGCGGGAGGCAATGGATGACATCTTCGCACTTCTGCAAATCCGCGCTATGA</cdnaseq>

Protein Sequence

<aaseq>MGPAPKAEPLKQRVNRCLLRLSDRDTEAMAAAELDGIARGLEADELPAFLAAVSDARPTDRTPLRRHSLRLLALLAAEHPRDAVEPLVPRLAKPELISIIGAASAASGGGAAATAVPSLRDALTGEDWAARKAAAEALALLALEHGDNLVEQKPSCIAVFEAKRFDKVKIVRESMNRMIEAWKEIPDMDEEVCSSDVPPSPQSQTRSSSTDSASDGRYPADSLGSNSVQSVRRRNLSPTKKSPPREALHNVSNRRTSSSSIGNKKNSPPSRHNSGQAKNFECKVNVTDAPDATPIKTVTEEKLLKDGNVRARLEARRVLFQKNGEERYNKVPGLKSGSRVVPYNGDDDSEEIAESEDVHEEFQSGHKEEDLSKIRMQLVQIENQQTSLLNLLQKFMGSSQNGIRSLETRVNGLEMALDEISRDLAASSGRMPSSEPDMNCCILSPKFWRRHDGSRYSSKYSISDIANYSEESRTSYKWERQKFGVQGVVTNPLAEPNASFAGNTVVAQEARRQNSAQYKSRRWCHGDHPRAARTASSGRQWMTSSHFCKSAL</aaseq>

Gene Sequence

<dnaseqindica>1..273#392..619#732..861#1164..1711#2548..2930#4736..4832#ATGGGCCCCGCGCCGAAGGCGGAGCCCCTGAAGCAGCGGGTGAACCGGTGCCTGCTCCGGCTGTCCGACCGCGACACGGAGGCCATGGCGGCCGCCGAGCTGGACGGGATCGCGCGCGGGCTGGAGGCCGACGAGCTCCCTGCGTTCCTCGCCGCGGTGTCCGACGCGCGCCCCACCGACAGGACGCCGCTGCGGCGGCACTCGCTCCGGCTGCTGGCGCTCCTCGCCGCCGAGCACCCGCGCGACGCCGTGGAGCCGCTCGTCCCCAGGCTCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTCCGCGTTCAAGGCCAAGCCGGAGCTCATCTCCATCATCGGCGCCGCCTCGGCCGCCTCCGGCGGCGGCGCCGCGGCCACCGCGGTGCCCTCGCTACGCGACGCGCTCACCGGCGAAGACTGGGCGGCGAGGAAGGCCGCCGCCGAGGCGCTCGCGCTGTTGGCGCTGGAGCACGGAGACAACCTCGTCGAACAGAAGCCATCCTGCATTGCCGTCTTCGAGGCCAAGAGATTCGATAAGGTCGAATTCTTGTAGCAAACCTGGGATCTTGGCAATGACATTCTGGATTTTTACTTTCGTGGATCTGCTTGTTTGTTGAAATTTTTTTTAACATTTTTTTTTGGCAATGCAGGTGAAGATTGTTCGGGAGTCGATGAACCGGATGATTGAGGCGTGGAAGGAGATCCCAGACATGGACGAGGAAGTATGCTCCTCCGACGTGCCGCCATCTCCGCAGTCGCAGACGAGATCTTCTAGCACAGGTAATGTGGCTGTTCTTGAAGCAGTGGCCACTGCTCTTTCTTTTGGGTGATTTGGGTAAATTTATGTCTAATTGTCTACTGTTTGTAACCTTAGTTGAATATGAACTTGTTTGTGGTAAAAAAAAACATATATGGACTGGGTTCAGTAAAACACAAGGCAGAAGGATTCTTTGTTGGATATGTGTGACAGTTCTTTTGCTTGTTTGCATTATATTGTGGATTTCTTGGACTAACTGCTGTCGATTAAAGGCGGTAAAACGATAAATGTGTGTATCTGACACTATGATTATGTAATCAAACAGACTCTGCAAGTGATGGACGATACCCAGCTGATTCCCTTGGCTCCAACTCTGTCCAGTCAGTTAGGAGGAGGAACTTATCACCGACAAAAAAATCACCCCCAAGGGAAGCATTGCACAATGTCAGCAACAGAAGGACCAGCAGTTCTTCCATCGGAAACAAGAAGAACTCACCGCCGTCACGCCACAATTCAGGCCAAGCCAAGAACTTTGAGTGTAAGGTTAATGTGACTGATGCTCCGGATGCGACCCCGATCAAAACCGTGACCGAGGAGAAGCTTCTGAAAGATGGCAATGTTAGAGCAAGGCTTGAGGCGCGGAGGGTACTGTTCCAGAAGAATGGTGAGGAGAGGTACAACAAGGTTCCTGGGCTCAAGTCAGGGTCTAGAGTTGTTCCATACAATGGGGACGATGACTCGGAAGAGATTGCGGAGTCTGAGGATGTGCATGAGGAGTTTCAGTCAGGTCACAAGGAAGAGGACCTGTCAAAGATCAGGATGCAGCTTGTTCAGATTGAGAATCAGCAGACCAGCTTGCTCAATCTTCTCCAGGTAATTTTCCCTTGCCGTGTGGCATGTTGTCAATGAAGAACCCAGTTGAACTCTTGATTTTTCACATTGACATTTTGTGTTTGATCGGTACCATTACCCCAGGATTGCCCATAGGTATGCGTGATTGCACAGGATATATGTATGCATGTTCAATTGGATAGAAAAATCTAAACCAAAGATTTGAAAACCTAATAACAAAAAATAAATTTAGTCTATGCATCCCTTAGTTTTTCAAAAACGCGTCATACTAAATGTGATTTGGTTCATTATGGAGTATGGACTAGTGTGCATTTATGGAAGCCTTATCTAGCATTCATGAAATCAGGATAGCTTATAATGGAGGTGGCATACGGCTTATGTTATCGGTGACACAAACAAGTTATTATTCGGTCTCATTGTGCAGTATTGACCATTGGTATAAATCAAAGATCCATTCACTGTATCTTGATAATACTCTGACACTATATATCCATTGAATGTGTCTTGATAATACCAGTCCGGATCACTGTACATGAGCAATGGTCATGGCATGGGGAGAACTTGGACAGCAACACGTCATTTACTGGCTGTCTGACAATTTCTTGATCGGCAACTCTGTAACCATATATTGTTGTTTTTCACCCAAACCAGAAAAGAAATCAGGATTTTGTGAAATTTTTGTGTGTGTGTAATGCATCAGGAATGATTATGTGGAAAGCTATATATAAGAAATAACCCATAGTTTTGAAATATTACTACATCACTCCCTGTTTGCTGAAAACATGTCTAGCATGAACTTATCTCATCTTGCTCATAAGAAACTGAGTATGTCTGACATTATGATTGCCTGTGCTCAGAAATTTATGGGGAGCTCTCAGAATGGGATCCGTTCCTTGGAGACACGGGTGAACGGACTGGAGATGGCACTGGATGAGATCTCCCGTGATTTGGCTGCTTCTTCAGGAAGGATGCCAAGCAGTGAACCTGATATGAACTGCTGCATCCTTAGCCCGAAATTCTGGAGAAGACATGATGGCAGTAGATACTCATCCAAGTACTCCATCTCCGACATAGCAAACTACTCCGAGGAGAGCAGAACTTCTTACAAGTGGGAGAGGCAGAAGTTTGGAGTTCAGGGTGTTGTCACCAACCCATTAGCAGAGCCAAACGCTTCATTCGCAGGAAACACGGTTGTTGCTCAGGAAGCCAGGAGACAGAATTCAGCTCAATATAAGTCAAGGTAGGTTAACTCACTCAAGCGCAAAATCATCTCACTTTCTGTAAGTCAGTATTATGCAATTAGATTTGGTAGGTAGGCCAACAAGATGTGATCAGGACACCTCAGAAACTGATAGTAACATACCAACATAAAAGTAGTCACTTTCTTGAATAGAATATCATCTGGTTCAATTTATGCTGTAGTTCCCCTATTATGAAATGCATTTTTGCTGAATCTGCATTCCTATTATGACAGGGCTTCCTTCTTGTTTCGCGCCCACCTTCATTTATTATTATAAAATTTGTTAGGTTGTCCAACATGGTTACTTCTTTCAATTGATTGGCAATTTATACTTTCTATTCCATTTTCTTCAGGATGGGTTAGAGTCGACAAAGGCTACTGCGTGAAGTTTTCGACGATATGAACAAAGCATGGTGCAGCTGCAAGATCCTACCTTTGCTGCATTTTCAAGCTCTTTTCTTCTTTTCTCCAAGTTGAAAAAAAACAGAGATGTACATGAGATATGAAGTTCTGTTTGAGTTCAGACTCGTGAGAAACAGCCTAAAGCCCTAGACTCTAAAGCAAGACCCTCTCTGCGAGCTTGGCATTCCATTTGTGTTATACACCAGGCCTTGAGATTGAGACAACCAGTTAGCTAATGCAGGCTTGCTGAGGGCAAAGCATATGTAGAGTTTAAAATGAGAAATCGAGTTCACAGCAACTATCCTTGCAAGGATACTCAGCCATGGTTCCCATGAATGTATCTTGTTACTGCTTGTACATAATTTGGATATGGTAATTCCGATGCCGGTGAGACGACTTGAAACAAAATTTTTGTTCAGTACGATGAGATCATGAGGGAAAAGATCCATTGTGGCTCAAACGGCATAATGAAAAAGCTTCACTGCCTGCCAGCACTGGGATTCTAGGAAGGTCTTATATGATTCTTCCTCTTTGGGAAAATTGGTTTTGTGCGATCTCGAATTTAGAAGTACATATATCACCTAAAGTTGATAGTATATTTTTTACTAAATTGCGCTTATGGTATGTGAACTTAAGTGATGAGTATAAATAGATACAACAACTTATGGATTGTTCATTTCGGCATAACAATTTGGGTACGTAGTTTGTGCGAACCTGGACAATCCAAGCAAACAAATTGATCTAACATGGGGCATAAACTTTATGCCATGGCAACTTACACCTATGACCTTGTTTAAGAGATCTTATTTTGAATCTGAAGAAAAGAGAAATTAGTTGCGCAAAAGTTTATTTTCATGTTCAGGACATACAATTTATTCATATTTTCATGTCTTGGGGGAATTTTGGCCTTCTATATAAGTCAAAACAATGTTTATTTTTATGTTAAGAACCAAGAGAATTATTTGTCATGCCTTAGTAGGAATAACTATTGTAAAATTCATTTTTAATTTTTTTGTTCAGGCACTCTATTTTCATCGAAAGTTTGTTTGAAAAGTTAATTTTTATGGCCGGGCATCTTTAATTCTTTTGCTTTTGTGTTAGTCTAAATCTTGAAAATATCCCTCAAATAATAGTTACACGTTTTGTCCATCTAAAATTTGATGTGCAATAATAATTATACATTAGTGTGTGCCACGTTATATTAATTTTGCTTGTCTCGATCATTTTGGACCAGCTTCGCACAGACTAGTCAAGTTAATGCACTGAATTGACCAATTTATAAGTTTTCTTTACCTATTTGTACCCACTATACAAGTTCAAGCATAATTTACTCTATATTTTAATACTACTAAAAGGGGTTGTAATATTTTTTTAATATAATTAAGTTCATTTTAATACTGCAGGAGGTGGTGCCATGGTGACCACCCGAGGGCTGCGAGGACAGCGAGTAGCGGGAGGCAATGGATGACATCTTCGCACTTCTGCAAATCCGCGCTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022616