BGIOSGA022639

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Revision as of 13:20, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022639| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022639, complete gene.| tag = P0624H0...")
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Gene Name

BGIOSGA022639

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022639, complete gene.

LocusTag

P0624H09.1

Ensembl Transcript ID

BGIOSGA022639-TA

Ensembl Protein ID

BGIOSGA022639-PA

Length

4479

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9113645..9118123

Sequence Coding Region

9113645..9114241,9114499..9114810,9115139..9115309,9116078..9117834,9118111..9118123

Genome Context

<gbrowseImage1> name=IndicaChromosome06:9113645..9118123 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:9113645..9118123 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTATTACCGCAGGCAAAGGAAGGCTTCTTCTGAGGCCAATGCCAATGTGTTTATGCCTGGGGGTCCAAATGATATCTCATTTCCTGCATCAAATAGGGCTCATGATTGGGGATATGGCGGTGTTGGCAAAGAATGGGAAGCTAGTTATGCTCGCAAACTCCAGTTGATGAATTTTCTTTCTTCACTGCATCAACGCACTGCAAATCCTTTGGTAACCACTAGAATGGATGCTAACATGGACACTCCTTTGGAGCAAAAACAGAAGGACAGCTCAGCAATAATAGTTCTTGATTCCGATGATGAGGACGGATATACGGAAGGATGTGAACAGCTCACATCTGAGAACAATAAACAACAGGCACCATCTGGACTCACTAGTCCTTACACGACATGGATTGTATCCAGTGCGAAAGACCAAGTAAATGGAACCTTGCATGTTGATGGAGTCCAAAGCACTCAAATTGTTCCATATTATGGTCAAAATGCACCGTTAATAAATCAGTTCCCTTTGCAAACCAGCTGGCAACCATCTATCCAATATGAAAGGGTTATATTGCAGAAAAGACCTGAGGAGCAACGCGTTCAAGATCTGGTGGCAGCAAGCCATGCAGAGAAGATAGCAGAAACACAAGTTCTCCTTACTCTTCCTACTCTTCCTAATGAGAGAAAACGAAGGAAAACAGAACCCACCACCCTGGTAGATGTTGATGGTGGAACTAACCTAGGAAAAAGAAAAAGGAAAAATCATCAAAATCAAGCAGCAGTTGATTCAAACTTGGATTTGCAACAAAATGATGTTCCTTCACAAAGCTACAGGACTATGATAGAAGAGGAGAAACCTGTAAAAGAAAGTGATGGTCTCGAGGATCTTTGGAAAGATTTTTCATTGGCTGCTGAATGTACAAAGCTTGATACAAATGAAGACATGTCCAATGAAAAAGATGTGGATGATGAAAATGAGATGGATGACGACTGCAATCATGACATTCGAATTCATGAAGATCTAGGCCACGTATGCCGTATTTGTGGCATGATTGTTAGAAAGGCTGAAACAATAATTGATTATCAGTGGAAAAAGGCTTCAAGGACAAGAACAAATTACTATGAATCACGTTCAAAGGATGCTGATGAGATTGATACTGGTGCTGTTAAAGTTTCCGAAGATTTCATTGTCTCTGATATTGCCATTCATCCAAGACATGCGAAGCAAATGAGACCACATCAGTTGGAAGGATTCAGCTTCCTGGTCAAGAATCTAGTGGGAGACAAACCTGGAGGTTGCATTCTAGCTCATGCTCCTGGTTCAGGGAAGACATTTATGCTCATAAGTTTCATTCAAAGCTTCTTAGCAAAGTATCCTTCTGCAAGGCCCCTTGTAGTGCTTCCGAAAGGGATTTTAGGTACTTGGAAGAGGGAGTTTCAGCGGTGGCAAGTGGAGGACATACCACTATATGATTTCTATTCTGTTAAGGCTGACAAAAGAGTAGAGCAACTGGAAGTCCTCAAATCTTGGGAAGCCCAGATGAGCATACTATTTCTTGGATACAAGCAGTTCTCACGAATCATCTGTGGTGATGGAGATGGAAACATTGCAGCTGCGTGTCGGGACAGGCTGCTTATGGTACCCAACCTACTTATACTAGACGAGGGTCATACACCAAGAAATCGGGAGACAGATGTACTGGCATCACTAAAAAGAGTCCAAACACCACGCAAAGTGGTCCTGTCTGGTACACTTTTCCAGAACCACGTTTCTGAAGTGTTTAACATCTTGGACCTTGTGCGCCCTAAGTTTCTCAAGATGGAATCATCCCGTCCTATTGCTAGACGTATAATGAGTCAGGTAGCAATATCAGGTATCAGGAGTTTAAAAGGGGTTCATGACAGTGCATTCACTGAGTCAGTGGAAGACACCCTGCTGAACGATGACAACTTCACTAGAAAAGCCCATGTTATTAGAAGTCTTAGAGAATTAACAAAAGATGTGCTTCACTATTACAAGGGTGATATCTTAGATGAACTACCTGGCCTAGTGGATTTTAGTGTGTTTTTGAAACTCAGTACCAAGCAGAAAGAAATTGTTCACAAGATAGAAGCCTATGAGAAGTTCAAAAGAAGTGCAGTGGGGACTGCATTGTACATTCATCCCTGCCTGTCAGAAATTTCAGAGGGTGATGCTGCAGATAGGGCGAGCAACTTGACAGATGCCACTGTTGACAGCTTGATTGAGTCTATCATCATTAAAGATGGGGTGAAAGCCAAGTTTTTCTTTAACATTCTGTCTCTTGCTAACTCTGCAGGAGAGAAGTTGCTTGCCTTCAGTCAATATATACTTCCCATGAAATTTTTGGAAAGGTTGTTGGTTAAGAGGCTGGGCTGGCATGTAGGGAAGGAGATTTTCATGATATCTGGTGATACTAGTGCAGACGACAGAGAAGTGGCGATGGATCAGTTTAACAACTCTGCCGATGCAAAAGTTTTGTTTGGTTCCATCAAGGCCTGTGGAGAGGGAATCTCCCTTGTTGGTGCATCTCGAGTCATCATTCTAGATGTTCATTTGAACCCATCTGTCACCCGTCAAGCAATTGGACGTGCATTCAGGCCCGGACAGCAGAAGAAAGTGTTTGTGTACAGGCTTGTTGCTGCTGATTCTCCAGAGGTGAAGTTCCATGAAACTGCATTCAAGAAAGAAGTTATCCCAAAGCTATGGTTTGAATGGAGTGAGCTCTGCACTACTGAAGACTTCAAACTGAATCAAGTTGATATTGATGACTCTGAAGATGAACTTTTGGAGGCTAATGCTATCCGCCAGGATATCAAGGCTTTGTATAGAAGGATGTTACAGTAG</cdnaseq>

Protein Sequence

<aaseq>MYYRRQRKASSEANANVFMPGGPNDISFPASNRAHDWGYGGVGKEWEASYARKLQLMNFLSSLHQRTANPLVTTRMDANMDTPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQAPSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQYERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGTNLGKRKRKNHQNQAAVDSNLDLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAECTKLDTNEDMSNEKDVDDENEMDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRSKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRRMLQ</aaseq>

Gene Sequence

<dnaseqindica>1..597#855..1166#1495..1665#2434..4190#4467..4479#ATGTATTACCGCAGGCAAAGGAAGGCTTCTTCTGAGGCCAATGCCAATGTGTTTATGCCTGGGGGTCCAAATGATATCTCATTTCCTGCATCAAATAGGGCTCATGATTGGGGATATGGCGGTGTTGGCAAAGAATGGGAAGCTAGTTATGCTCGCAAACTCCAGTTGATGAATTTTCTTTCTTCACTGCATCAACGCACTGCAAATCCTTTGGTAACCACTAGAATGGATGCTAACATGGACACTCCTTTGGAGCAAAAACAGAAGGACAGCTCAGCAATAATAGTTCTTGATTCCGATGATGAGGACGGATATACGGAAGGATGTGAACAGCTCACATCTGAGAACAATAAACAACAGGCACCATCTGGACTCACTAGTCCTTACACGACATGGATTGTATCCAGTGCGAAAGACCAAGTAAATGGAACCTTGCATGTTGATGGAGTCCAAAGCACTCAAATTGTTCCATATTATGGTCAAAATGCACCGTTAATAAATCAGTTCCCTTTGCAAACCAGCTGGCAACCATCTATCCAATATGAAAGGGTTATATTGCAGAAAAGACCTGAGGAGCAACGCGTTCAAGATCTGGTGGTATGTATCTTTCACTTGAAATTTTTCAATGGACTATCCACTTCTACATATTGGTACTTTTACTCCTTTACATACCTGCACTGACAAACCAATTTTTTGCGTCATGTCTTGTGATTGTATTTTGATAAATCTGAAGAGCATTATGATATTTCTTGTCTGGAATGTTAGAATGGAAATGTTTGATGTTTGCTGAATCTATACTCTTTTGAAGCTTAAATATCTCATATTTGAACTTTAACTCTTGTTGCTCACTGTAGGCAGCAAGCCATGCAGAGAAGATAGCAGAAACACAAGTTCTCCTTACTCTTCCTACTCTTCCTAATGAGAGAAAACGAAGGAAAACAGAACCCACCACCCTGGTAGATGTTGATGGTGGAACTAACCTAGGAAAAAGAAAAAGGAAAAATCATCAAAATCAAGCAGCAGTTGATTCAAACTTGGATTTGCAACAAAATGATGTTCCTTCACAAAGCTACAGGACTATGATAGAAGAGGAGAAACCTGTAAAAGAAAGTGATGGTCTCGAGGATCTTTGGAAAGATTTTTCATTGGCTGCTGAATGTACAAAGGTACAAGTTGTAATCACAGATGTTCTTTTTTTACTTTTATTCTGCAGCATTATAAAATTGTTGGTTCTTTTTCCATCTGACTGCTAATTGTACTCGTAAATACATGCTATAATCTTTATTTTTTGTTTCAAGATTGAATACCGCTGTGCACAAAGTAAGTTTCATGGCAAAGTGTATTTTATAAGATAAGGTAGAGTTTGAAAAGGTGTTCATTTGTCAAATCATTTAAATATGTGTATTATGACAAAGTTTTGAAGCATTTCAATTGATTATTTCTATCTGATGTGTGTCTTTTTCCAATAATGCTCAAGTAATATTCTTTGTCCAGCTTGATACAAATGAAGACATGTCCAATGAAAAAGATGTGGATGATGAAAATGAGATGGATGACGACTGCAATCATGACATTCGAATTCATGAAGATCTAGGCCACGTATGCCGTATTTGTGGCATGATTGTTAGAAAGGCTGAAACAATAATTGATTATCAGTGGAAAAAGGTGCGTACCATGTTTAGGACATGTGATACTTCAAAGTTCTCAAAACTATGATGTCTATGATTCTAGTTTTACTTTGAGGAAATTATAAGCAGACAACCAACTTTGGGAATTGTTTTTTCATAAAGAAACTGCAAGTTAATTATTTACATGAAACCCCTCATGTCTCATACAGCGTCAACTTTTAAAGCCCCAAGCGTTAGATCTGGTTATACTTGACACTACACACCAGCTGTATCCACTTTGCTGTGTTCATGTCAAAAATCATTTTCCTCACTTCCTACACAACTGCTATTAATATTAAGGCACATAGCACCTTGAAGGTCTTTAGGCAGTGGAAGGGCATCACGATCAAGAGAAATTTGTGGATTCATGCTGAATGAAATAAAAATTACTGACATATAGTTCTCACACATACGGTTTTTGTAATGCTTGTTAGATTTACTGTGAATCTCTAGGAATTCTGGTTTCTTTTATAGAAAAACATGCTATGGGGGACCTTTTCTTTACTGAAATACTTCCTAAAATGGGAGAGTGTTTTCATTACCAACTCTTTTGATATTGACACCACTTTGGAGTATGTAGTAATAGTCGTTTTGGAAATCATATGGATTTCTTTAGTGGCTTGTACATGAGCTAAGCTGGGAGCCTGGGCAGTATTCAGAGCATGAGTCATGTAGTAAAGATGGAATGCTTGCATCAGTTTTCTAAAGTTTGTTGGATTTTCATACGTGGATAAGAAAATTTAACTTCATGCTTACATTATATCAGGCTTCAAGGACAAGAACAAATTACTATGAATCACGTTCAAAGGATGCTGATGAGATTGATACTGGTGCTGTTAAAGTTTCCGAAGATTTCATTGTCTCTGATATTGCCATTCATCCAAGACATGCGAAGCAAATGAGACCACATCAGTTGGAAGGATTCAGCTTCCTGGTCAAGAATCTAGTGGGAGACAAACCTGGAGGTTGCATTCTAGCTCATGCTCCTGGTTCAGGGAAGACATTTATGCTCATAAGTTTCATTCAAAGCTTCTTAGCAAAGTATCCTTCTGCAAGGCCCCTTGTAGTGCTTCCGAAAGGGATTTTAGGTACTTGGAAGAGGGAGTTTCAGCGGTGGCAAGTGGAGGACATACCACTATATGATTTCTATTCTGTTAAGGCTGACAAAAGAGTAGAGCAACTGGAAGTCCTCAAATCTTGGGAAGCCCAGATGAGCATACTATTTCTTGGATACAAGCAGTTCTCACGAATCATCTGTGGTGATGGAGATGGAAACATTGCAGCTGCGTGTCGGGACAGGCTGCTTATGGTACCCAACCTACTTATACTAGACGAGGGTCATACACCAAGAAATCGGGAGACAGATGTACTGGCATCACTAAAAAGAGTCCAAACACCACGCAAAGTGGTCCTGTCTGGTACACTTTTCCAGAACCACGTTTCTGAAGTGTTTAACATCTTGGACCTTGTGCGCCCTAAGTTTCTCAAGATGGAATCATCCCGTCCTATTGCTAGACGTATAATGAGTCAGGTAGCAATATCAGGTATCAGGAGTTTAAAAGGGGTTCATGACAGTGCATTCACTGAGTCAGTGGAAGACACCCTGCTGAACGATGACAACTTCACTAGAAAAGCCCATGTTATTAGAAGTCTTAGAGAATTAACAAAAGATGTGCTTCACTATTACAAGGGTGATATCTTAGATGAACTACCTGGCCTAGTGGATTTTAGTGTGTTTTTGAAACTCAGTACCAAGCAGAAAGAAATTGTTCACAAGATAGAAGCCTATGAGAAGTTCAAAAGAAGTGCAGTGGGGACTGCATTGTACATTCATCCCTGCCTGTCAGAAATTTCAGAGGGTGATGCTGCAGATAGGGCGAGCAACTTGACAGATGCCACTGTTGACAGCTTGATTGAGTCTATCATCATTAAAGATGGGGTGAAAGCCAAGTTTTTCTTTAACATTCTGTCTCTTGCTAACTCTGCAGGAGAGAAGTTGCTTGCCTTCAGTCAATATATACTTCCCATGAAATTTTTGGAAAGGTTGTTGGTTAAGAGGCTGGGCTGGCATGTAGGGAAGGAGATTTTCATGATATCTGGTGATACTAGTGCAGACGACAGAGAAGTGGCGATGGATCAGTTTAACAACTCTGCCGATGCAAAAGTTTTGTTTGGTTCCATCAAGGCCTGTGGAGAGGGAATCTCCCTTGTTGGTGCATCTCGAGTCATCATTCTAGATGTTCATTTGAACCCATCTGTCACCCGTCAAGCAATTGGACGTGCATTCAGGCCCGGACAGCAGAAGAAAGTGTTTGTGTACAGGCTTGTTGCTGCTGATTCTCCAGAGGTGAAGTTCCATGAAACTGCATTCAAGAAAGAAGTTATCCCAAAGCTATGGTTTGAATGGAGTGAGCTCTGCACTACTGAAGACTTCAAACTGAATCAAGTTGATATTGATGACTCTGAAGATGAACTTTTGGAGGCTAATGCTATCCGCCAGGATATCAAGGCTTTGTATAGAAGGTCAGCTATCTCTTTCTCCCGGTGCGCATGTGCAAGTTAAACCCTGGAGGTGCTATCTCTGTCTTATCCAAAATTGTCTTGTAGGTAACAAGTTATATGTGGCTGCTGTACACCATGTACATAATGCAATGCTGATCTTTCTGGCTGATCATCGCTGTGAAGTAAGGGGATTTCTCGTGAATCATTCTTCACATTACAAAATCTTTGCCCCTTATTCTGTTCTGATTGTATGACCATCAGCTTTTTCGTTAACCTTCATCATTTTTCTTCCTACAGGATGTTACAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022639