BGIOSGA022641

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Revision as of 13:20, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022641| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022641, complete gene.| tag = P0624H0...")
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Gene Name

BGIOSGA022641

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022641, complete gene.

LocusTag

P0624H09.6

Ensembl Transcript ID

BGIOSGA022641-TA

Ensembl Protein ID

BGIOSGA022641-PA

Length

5805

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9136349..9142153

Sequence Coding Region

9136349..9136756,9137102..9137541,9137649..9137914,9138644..9138732,9139446..9139593
,9139677..9140116,9140265..9140779,9140856..9140916,9141006..9141278
,9141448..9141709,9141798..9142153

Genome Context

<gbrowseImage1> name=IndicaChromosome06:9136349..9142153 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:9136349..9142153 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCCGCCGCGGCCGTCTCCGCCGCAGCCCCCGCCGGAGCCGGGGAGACGAGGCGACTGGCGGGGGAGGTGGCGCGCGTGCTGGACGAGTGCCGCGCCTCCCTCGCCGTGCACCCGCGGAAGCTCAGGGAGCTCGCGGCGCTCCGCTCCTCGTCCCCCGCCGCCGCGGGCCGGTTCCTCCCGGCCTTCTGCGCCGCGCTGACCCCGCTGTTCGACCTCGCGAAGCGATCCGCCGGGGCCGAGCGCGTCGCGCGCTTCGCCGCCGCGTTCGCCTCGGCCTCCTCCGCGGCGGCTGGGTGCGGCGGCGGCGACGGGTTCCTCGAGGGGTTCCTCAGGTTCCTCCTCGCTGGCTCCGCCGCCACGCACCGTCCCGCACGCTTGCGCTCCTGCCAGATCATTTTTGAGATAATAATGCGCTTGCCGGATGATGCTGAGGTGAGTGATGAGATTTGGGATGAAGTTATTGATGGCATGAAGGTTCGCGTTCAGGATAGAATCCCTGGAATTCGTGCCTTCGCTGTGCGTGCATTGTCTCGCTTTGCGAGTGATGGGGAGGACAGTGACATTGTTGATCTTTTCCTTGAGACCTTTGAAAAAGAACAAAATGTGGTAAGTGATATCATTTTAGTAACTTTACCTATTCTGAATGTTGGACTTCGCTATTATTTCATCTCACTAGGGATTGCTCCATATGTGAAGGAGGTCCGGAAAGCAATTATTTTGTCTCTTCCGCCTTCAAATGCTACACTGGAGACTGTCATTGAATCAACGCTTGATGTAAGTGAGTCTGTTAGGAGAGCAGCATACTGTGTGCTTTCAACCAAATTTCCCCTACAAAGTCTTAGCATCAAGCAGAGGACAAGTCTTCTTCACAGAGGTCTCTCTGATAGGTCTGCATCAGTGAATAGTGAATGCCTGAAAATGCTGAAGGATGAGTGGCTTATGAAATATTGTAGTGGAGATGTCATCACCCTTCTCAGGTTTCTTGATGTTGAGACTTATGAGGAAGTTGGAGAAACAGTAATGGGGGTGCTTATGAAAGATGGTTCTGTGCGCGTGCAAGATGGGCAGACTATTAGGCAGTACTTCACTGCAAATACTGAGGATGAAGCAGAAAAGGTTTCCAATATTCAGCTTATGGATGCTGAGGTTGCTCTCTACTGGAAAATTATGTGCAAGCATTTGCAAGCTGAAGCTCAGATCAAAGGCTCGGAGGCTGCAACAACTACAGGCACAGAAGCAGCAGTATATGCTTCTGAGGCTTCTGATAAAAATGATCTTCTAGACGGTGTTCTTCCTAGCACAATATCTGACTACGTTGATTTGGTAAAGGCGCACCTTTCTGCTGGACCAAATTATCACTTTGCATCACGGCAACTATTGTTGCTCGGTGAAATGCTTGACTTTTCTGATACCATGAACCGTAAAATTGCAAGTTCATTTCTACATGAGCTTTTGACCAGGCCTCTTGAACATGAAGTTGATGAAGATGGGAATAAGATGGCTATTGGAGATGGTGTGAGCCTTGGAGGGGACAAGGAGTGGGCCAAAGCAGTAGCAGAATTGGCTAAAAGAGTGCATGCTTCTGTTGGTGAATTTGAAATGGTGGTTGCTACTGTTGTTGAAGAACTGGCTCGACCATGCAGGGAGAGAACTGCTGACTTCATGCATTGGATGCATTGTCTCGCTGTGACAGGCCTTCTCCTAGAGAATGCTTCATCCCTACAGAGCCTTCAAGGCAAAGCAATTGAACCTCTGGAATTACTTCAGTCTTTGTTGCTTCCTGCGACAAAGCAGAATCATGATGATGTACAAAGGGTTGCTTTGAGATGCCTTTGTCTTTTTGGATTGCTAGAGAACAGACCAAATGCAGAGTTGGTGAAGCAATTGAGGTTATCCTTCATCAATGGACCTGACCTGGTTAGTGCCATGGCATGCAAGGCCTTGATTGATCTTGTAACTTGGCATGGTCCACAAGAAATAGACCAAACCATTGGAATTGAGTCATCTGATGCTACCAACGAGAAATCCCAATTTACTACAGTAGACGTCTCCAATATGAATGATGACGATCTAAATATTGGAGTTCTTGATATTCTATTTTCTGGGTTTCTTAAAGATGATTGGGAGTTTAATCTTGAAGGTGATAATCATGATAATGTCCCAACCATTCTTGGTGAAGGTTTTGCAAAAATTCTTCTTCTAAGCGAGAACTATGCAAGGATATCTGCTGACTTGCATCCTGTAATCCTGGCTCGACTTGTCAGTTTGTATTTCATGGAGGAAACTAAAGAACTTAAAAGATTGAAACAGTGTCTGTCTGTCTTCTTTCAGCACTATCCAGCCCTTTCAGACAAACACAAGAGGTGTGTCTCCAGTGCATTTGTGCCAGTCATGAGAGCCATGTGGCCAGGTTTATATGGTAATGTTGGGGGTAGTGCACATGCTGTTTCAAAAAGGCGCAAATATGCTGCCCAAGCTGCTCGTTTTATGGTTCAAATGGTACAAACTCCACTCTTTTCGACCGAAACTACGGAGCAAGCTAGTTCGAGTCCTGAAAGCCAGTCAACTAAACCAGATATGTTGAACAATTTCGACATTAGTGAGGAAGGGCTTGCCATCCGTATTGCAGTTGAGGTAGCAAATTGCCCGGATAAGAAGACTGCAGCTGCGAAAGCATATTGTTTGGCATTGTGCAAGGTTGCTGTGCTTCTGAGATTCCGGCAATCCGAACAGAAGGCAATCAAATGCATGAGAGGATTGATCAATGCATTGGCTGCTTCGGCTTCTTCCGATAAGGACCTTATGAAGGAGCTGTCTCAAATGGCATCACGGCTTAGATCGCTCGATGAGCACCCGGAAGAAGAGTTGCCACAAGATGAAGCTGAAGAAATATTCAAGAAACTAGGATTGGATGCTGGCTTCAGGTTGGAGACCAATTCTGTGGTGCCACCAACGCCAGCACCACGGTCAGTCCGGCCTCCTCCCAGCAGGAGAAGGGCGAGACGGTCGCCATCCTCCAGCGATGACAGTGACATAGATGGCCAGGAGGATAACTTGCACGCGACGTCGGTGAGCCGTGTTGCGGCCACTCCGGTGGTGATGACCGCGGCTCGTTCGCAGAGAGCAAGCAAGACGGCGGCGATGAGCAAGATGTCTGCGAAGCCCACCGTGGCTGCTTCTTCTGACGATGAATCGGACGACCAGTCCGGCGTGACATCCGGTGATGATTCCTCCGACGAGGATTCGTCTTAA</cdnaseq>

Protein Sequence

<aaseq>MEPAAAVSAAAPAGAGETRRLAGEVARVLDECRASLAVHPRKLRELAALRSSSPAAAGRFLPAFCAALTPLFDLAKRSAGAERVARFAAAFASASSAAAGCGGGDGFLEGFLRFLLAGSAATHRPARLRSCQIIFEIIMRLPDDAEVSDEIWDEVIDGMKVRVQDRIPGIRAFAVRALSRFASDGEDSDIVDLFLETFEKEQNVVSDIILVTLPILNVGLRYYFISLGIAPYVKEVRKAIILSLPPSNATLETVIESTLDVSESVRRAAYCVLSTKFPLQSLSIKQRTSLLHRGLSDRSASVNSECLKMLKDEWLMKYCSGDVITLLRFLDVETYEEVGETVMGVLMKDGSVRVQDGQTIRQYFTANTEDEAEKVSNIQLMDAEVALYWKIMCKHLQAEAQIKGSEAATTTGTEAAVYASEASDKNDLLDGVLPSTISDYVDLVKAHLSAGPNYHFASRQLLLLGEMLDFSDTMNRKIASSFLHELLTRPLEHEVDEDGNKMAIGDGVSLGGDKEWAKAVAELAKRVHASVGEFEMVVATVVEELARPCRERTADFMHWMHCLAVTGLLLENASSLQSLQGKAIEPLELLQSLLLPATKQNHDDVQRVALRCLCLFGLLENRPNAELVKQLRLSFINGPDLVSAMACKALIDLVTWHGPQEIDQTIGIESSDATNEKSQFTTVDVSNMNDDDLNIGVLDILFSGFLKDDWEFNLEGDNHDNVPTILGEGFAKILLLSENYARISADLHPVILARLVSLYFMEETKELKRLKQCLSVFFQHYPALSDKHKRCVSSAFVPVMRAMWPGLYGNVGGSAHAVSKRRKYAAQAARFMVQMVQTPLFSTETTEQASSSPESQSTKPDMLNNFDISEEGLAIRIAVEVANCPDKKTAAAKAYCLALCKVAVLLRFRQSEQKAIKCMRGLINALAASASSDKDLMKELSQMASRLRSLDEHPEEELPQDEAEEIFKKLGLDAGFRLETNSVVPPTPAPRSVRPPPSRRRARRSPSSSDDSDIDGQEDNLHATSVSRVAATPVVMTAARSQRASKTAAMSKMSAKPTVAASSDDESDDQSGVTSGDDSSDEDSS</aaseq>

Gene Sequence

<dnaseqindica>1..408#754..1193#1301..1566#2296..2384#3098..3245#3329..3768#3917..4431#4508..4568#4658..4930#5100..5361#5450..5805#ATGGAGCCCGCCGCGGCCGTCTCCGCCGCAGCCCCCGCCGGAGCCGGGGAGACGAGGCGACTGGCGGGGGAGGTGGCGCGCGTGCTGGACGAGTGCCGCGCCTCCCTCGCCGTGCACCCGCGGAAGCTCAGGGAGCTCGCGGCGCTCCGCTCCTCGTCCCCCGCCGCCGCGGGCCGGTTCCTCCCGGCCTTCTGCGCCGCGCTGACCCCGCTGTTCGACCTCGCGAAGCGATCCGCCGGGGCCGAGCGCGTCGCGCGCTTCGCCGCCGCGTTCGCCTCGGCCTCCTCCGCGGCGGCTGGGTGCGGCGGCGGCGACGGGTTCCTCGAGGGGTTCCTCAGGTTCCTCCTCGCTGGCTCCGCCGCCACGCACCGTCCCGCACGCTTGCGCTCCTGCCAGATCATTTTTGAGGTGAACCAAGGAAATTCCTGTAATATTTTATTTCCGTTTGCTTTCGTCAGTACTGGTCACTGGAGAAGTTTGTATAATTTTGGATGCTATGTTAATGTTGTGTTTAATTCTGCTATTGTGTTCTGCAATTTTGCAAAATTTTAGCAAAAGAGTATCTAAAAAAACTTTTCATTCCTACAGCCTCTCTTTTGATATAATTTGTTTATTGCATGGAGCATTTCGCTTTGGTCGTAAGGAACCCTGTAATTTCAGTAGTTCTTACCTCACAATTTAGATGGTGTAGTGTAGGGAGGATCGATTTTGACTTATATTGCTGAATTACTAACAGTTGAACTCTTCACGTAGATAATAATGCGCTTGCCGGATGATGCTGAGGTGAGTGATGAGATTTGGGATGAAGTTATTGATGGCATGAAGGTTCGCGTTCAGGATAGAATCCCTGGAATTCGTGCCTTCGCTGTGCGTGCATTGTCTCGCTTTGCGAGTGATGGGGAGGACAGTGACATTGTTGATCTTTTCCTTGAGACCTTTGAAAAAGAACAAAATGTGGTAAGTGATATCATTTTAGTAACTTTACCTATTCTGAATGTTGGACTTCGCTATTATTTCATCTCACTAGGGATTGCTCCATATGTGAAGGAGGTCCGGAAAGCAATTATTTTGTCTCTTCCGCCTTCAAATGCTACACTGGAGACTGTCATTGAATCAACGCTTGATGTAAGTGAGTCTGTTAGGAGAGCAGCATACTGTGTGCTTTCAACCAAATTTCCCCTACAAAGTCTTAGGTGAGTAGTCCTGTCCACTGGACACTCGATGTAGAAATGACAAATGTATTTGAATGGAATGAACAGTCTAATACTATATAAGTGAATTGATAGTTTCTTTGTTTCAGCATCAAGCAGAGGACAAGTCTTCTTCACAGAGGTCTCTCTGATAGGTCTGCATCAGTGAATAGTGAATGCCTGAAAATGCTGAAGGATGAGTGGCTTATGAAATATTGTAGTGGAGATGTCATCACCCTTCTCAGGTTTCTTGATGTTGAGACTTATGAGGAAGTTGGAGAAACAGTAATGGGGGTGCTTATGAAAGATGGTTCTGTGCGCGTGCAAGATGGGCAGACTATTAGGCAGTACTTCACTGCAAATACTGAGGATGAAGGTAAAATCTAAGCACAACCATCGGTATATTTTCGTAGTCATGCATATTTCCTTTAATTATTATGCCCATGCCTTCATGGTGAAATCTGAATATCTGGTCACTGGCCATGCAACGCACTTCAATAAAATAACCAAACCTAAAAGATAATGCTGAACGCAATGCACAGAACTGAACGGATCTGTTCAGGTATACCACTGACAACAAGTATGTATTAACGGGCTGATCAATTCATTATCTATGGCCCTGTTTCTTTCAGCTTAGGATTATTATAATCCAGATTATTGGGAGTAAGCTGAAAGAAACAGACAACTTATTAAAGTAGCTTATTATAATCTGGAGCCTAGCTTATTATAATCTGATAAGCTCATTTAGGTGAGCTTTTTCCAGATTATTGGGTGAAAAATTACCCACCATGCCACCCACTCCCTCTTTAGACTTGCAAACCCAATAATCTAGGCTCTAATAATCTAGGAAAGAAACAACTAACCGCTTATTCTACTACAGATTATAACAATCTAGCTTATAGTAATCTGACTCAATAATCTAGATTATAATAATCCCAAGCTGAAAGAAACAGGGCCTATGTCAATGGTGGTCATCTAGTCCTATCTCTTTAGCCGGATAGATCCTTGATTCAAGTAGAGGCTGGATAAACTTCCATTATATATAAAAAAAGTCACACTTCTCTTTTTCTGTTTGTTGATGGCACTCTCTGTACAACAATTGCAGCAGAAAAGGTTTCCAATATTCAGCTTATGGATGCTGAGGTTGCTCTCTACTGGAAAATTATGTGCAAGCATTTGCAAGCTGAAGCTCAGGTAAGCACTGTACTTTGCTTTTCATGTGCAATATATTTGTTGTTCATGGTACTTGTACAATAACAGGATGATGCATATACGGTAGTAGTTATTGTTGCAATTGTTTAAACATGGGATGATAGGAAACAAAATCCTGGAAATCACATAAGAAAGAGAATGAAAATGGAAGTTGTTGCTTATGTGTGCTGATTTACCCCTGAACCTGATTATGGACTATTTAGTTTATTTTCACATTTTTTGCACAGTCAACTTACAAGCATTTTAAGTTTGTTATTTTACATGTTATGACTAGCATAACGCTGTATCTTTATGACGTTGGCATATTTAACCAAAACTAGCTGGAGCAATGTGTGGTAATCAACCAAATAGCTCCGCAGAGGGTTCTTTGGTGGCAGAAAAAAGGTGCCTCTTGTTATGACTTATGATTGCTTGTCAAGAGATATTCCAGTACAAACACCGGCATGCTATATAATACGCCAAAGTTGGTGTTTGAGTCACAAACAGATTAAAGTTCTTGTAATTGCAAAACTCCTTTTGTTTTTGCTGAAGTAGTATTGGGCCATATGGCACTATTTATGTCAGAGGATATGTTCGAAACTTGGAATTCAGCACAGTAATAAGGTTGTATTGGTCCCATCAATGTATACTGCCCTGATCAGTGCTTTGCTTGATTCATGAAACCAATGTACTGATAGTAAGTAATTATTTTTCAGATCAAAGGCTCGGAGGCTGCAACAACTACAGGCACAGAAGCAGCAGTATATGCTTCTGAGGCTTCTGATAAAAATGATCTTCTAGACGGTGTTCTTCCTAGCACAATATCTGACTACGTTGATTTGGTAAAGGCGCACCTTTCTGCTGGTAAGTTGAGTTCGAAAACAATATAGATTGAGCATTCCAATATGTACAAACTAATTCACCATTGCCTGTATGTTCCATTTCAGGACCAAATTATCACTTTGCATCACGGCAACTATTGTTGCTCGGTGAAATGCTTGACTTTTCTGATACCATGAACCGTAAAATTGCAAGTTCATTTCTACATGAGCTTTTGACCAGGCCTCTTGAACATGAAGTTGATGAAGATGGGAATAAGATGGCTATTGGAGATGGTGTGAGCCTTGGAGGGGACAAGGAGTGGGCCAAAGCAGTAGCAGAATTGGCTAAAAGAGTGCATGCTTCTGTTGGTGAATTTGAAATGGTGGTTGCTACTGTTGTTGAAGAACTGGCTCGACCATGCAGGGAGAGAACTGCTGACTTCATGCATTGGATGCATTGTCTCGCTGTGACAGGCCTTCTCCTAGAGAATGCTTCATCCCTACAGAGCCTTCAAGGCAAAGCAATTGAACCTCTGGAATTACTTCAGTCTTTGTTGCTTCCTGCGGTAAGTTTAACTGTTCTACATTCTTTTGGTTTACAACACTTTGTATGCTAGCATTATTTTGTGCCCTTCCGGATGCTAAACATATGTCCTAATGTTCCTCTATTGAGTACTAGTCCTGATTTTGATGACGTTTATCTTATCCCTGCAGACAAAGCAGAATCATGATGATGTACAAAGGGTTGCTTTGAGATGCCTTTGTCTTTTTGGATTGCTAGAGAACAGACCAAATGCAGAGTTGGTGAAGCAATTGAGGTTATCCTTCATCAATGGACCTGACCTGGTTAGTGCCATGGCATGCAAGGCCTTGATTGATCTTGTAACTTGGCATGGTCCACAAGAAATAGACCAAACCATTGGAATTGAGTCATCTGATGCTACCAACGAGAAATCCCAATTTACTACAGTAGACGTCTCCAATATGAATGATGACGATCTAAATATTGGAGTTCTTGATATTCTATTTTCTGGGTTTCTTAAAGATGATTGGGAGTTTAATCTTGAAGGTGATAATCATGATAATGTCCCAACCATTCTTGGTGAAGGTTTTGCAAAAATTCTTCTTCTAAGCGAGAACTATGCAAGGATATCTGCTGACTTGCATCCTGTAATCCTGGCTCGACTTGTCAGTTTGTATTTCATGGAGGAAACTAAAGAACTTAAAAGGTGAATTGCACATTTTGCACTTTCTGTTGTTTCAAGTTTAGTCTTGCAGCACTCTTACTTGCACTTGTTTCTCCAGATTGAAACAGTGTCTGTCTGTCTTCTTTCAGCACTATCCAGCCCTTTCAGACAAACACAAGGCAAGTTGCAATGCATACAGTGTATCCCAGATTAGAAATAAATTATGCAAGTTAACTAAACACAATGATAATACCTTTATCTTTTGCAGAGGTGTGTCTCCAGTGCATTTGTGCCAGTCATGAGAGCCATGTGGCCAGGTTTATATGGTAATGTTGGGGGTAGTGCACATGCTGTTTCAAAAAGGCGCAAATATGCTGCCCAAGCTGCTCGTTTTATGGTTCAAATGGTACAAACTCCACTCTTTTCGACCGAAACTACGGAGCAAGCTAGTTCGAGTCCTGAAAGCCAGTCAACTAAACCAGATATGTTGAACAATTTCGACATTAGTGAGGAAGGGCTTGCCATCCGTATTGCAGTTGAGGTACTGCTGACAGGCTATAGTTCTTGAAATCTACACATGCTTCTAATATTGCTTGATACTACCAAACTAAATGTCATCTGTTATATAATGTGAATCGTACAATTTTGACAAATAATCTCTACTAAGAATGGTGGGAATAAACTGACATTAAATGCTTGGGAAATTGTAGGTAGCAAATTGCCCGGATAAGAAGACTGCAGCTGCGAAAGCATATTGTTTGGCATTGTGCAAGGTTGCTGTGCTTCTGAGATTCCGGCAATCCGAACAGAAGGCAATCAAATGCATGAGAGGATTGATCAATGCATTGGCTGCTTCGGCTTCTTCCGATAAGGACCTTATGAAGGAGCTGTCTCAAATGGCATCACGGCTTAGATCGCTCGATGAGCACCCGGAAGAAGAGTTGCCACAAGATGAAGCTGAAGAAATATTCAGTATGTCCATCGTTTCATTTCATCACCATCCTAACACATTCTCAACCTTTAATCTTACCGATTGTTCCTTGTACTTTTTTTGTCTCAGAGAAACTAGGATTGGATGCTGGCTTCAGGTTGGAGACCAATTCTGTGGTGCCACCAACGCCAGCACCACGGTCAGTCCGGCCTCCTCCCAGCAGGAGAAGGGCGAGACGGTCGCCATCCTCCAGCGATGACAGTGACATAGATGGCCAGGAGGATAACTTGCACGCGACGTCGGTGAGCCGTGTTGCGGCCACTCCGGTGGTGATGACCGCGGCTCGTTCGCAGAGAGCAAGCAAGACGGCGGCGATGAGCAAGATGTCTGCGAAGCCCACCGTGGCTGCTTCTTCTGACGATGAATCGGACGACCAGTCCGGCGTGACATCCGGTGATGATTCCTCCGACGAGGATTCGTCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022641

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022641&oldid=45166"