BGIOSGA022665

From RiceWiki
Revision as of 13:21, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022665| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022665, complete gene.| tag = OsJ_209...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022665

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022665, complete gene.

LocusTag

OsJ_20917

Ensembl Transcript ID

BGIOSGA022665-TA

Ensembl Protein ID

BGIOSGA022665-PA

Length

5137

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9806173..9811309

Sequence Coding Region

9806173..9806325,9807184..9808220,9808662..9808810,9809661..9809914,9810009..9810075
,9811305..9811309

Genome Context

<gbrowseImage1> name=IndicaChromosome06:9806173..9811309 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:9806173..9811309 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGAAGCGGCTGTGCAAGTCGCTGCTGAAGAAGCGGCTCGGGGATCTGATCCTGGGGGACCTCGACCTCGACCAGTTCGACCTGCAGCTCACCCGCGGCACGCTCCACCTCTCCGACATCGCCCTCAACGCCGACTTCGTCAACCGCAAGTTGTCAGGATCTGCTATCATGATGAAGGAAGGATCGATAAAATCCCTGCTAGTTAGAATTCCTCTACTATTAAACATGCGCGACTGTTGCGAGATTGTCGTGGAGGATTTGGAACTTGTGCTTGCTGCATCTGTTTCTAGCGAAGATCCTTCTGGTGATACTGAATGCTCTGTTTCTGGTAGTAATACTGACGACACACAGAAATCAGTCCAGGCCAAAAGAAATGAATCTGATGGCAATCAGTGTTCTACCTCTGCATCTCGAGATGTCGACAAAGGTGTCCAGAGGATAGCTAATGCTGTCACATGTTTTCTTACCAACTTTAACATCAAGTTAAAAAACTCTTATGTTGTATTTGATCCTCAAAACAGTTTGGATAACAAGGTCCCAGAATTTAATCGATCACTGGTTTTCCGAATCAAAGAGACCGAATTTGGAACCAATCTTTCAACAGATGGTATAATCAAACTTCACAATTTTGTGACATTCCATGAGGCGGTCATTGAGTTTTTGAAGATGGATGATGTTGATGCGCATGCACTTCTTCAGGATGATTTGGATAGAGGACCAGCAGACATTTCATCAGGTCATAGCACTACCGCGGTCTTGACAGGTCCTATCGGTGGATTCTCAGGGAAATTGAACTTAAGCATCCCATGGAATGGCTTGAACTTTAAGAAACTTGATGCAGATATATCTCTTAATTCATTAGAATTGCGGTTACAACTGAGCAGTATCCAATGGCTCATGGATGTGTGGGATTCTCTCCAAAGAAGAAATCTAGTACATGAACAGAGTTATGCCCATAATACCGCAGACATATCTAGATCTGCCAGTTCATATGTATCAAGCTCTTCAAAATCAGGTTCAGGTTCTGTGATAGCTAGCAGGGAACATTTGACAGAGGACACATTTTCTCAACTCAGGCAAGAAAAAACACAAGAGCCTTCCCTGACTATGCCATACTTGATTCCGGACTGGATTCCAGTGCTTATCCATGAGGATCACGGTGACCCTGATTCAGTTTGTGATGAAAGCATCGACCAGTTCTTTGAATGTTTTGAGGAACTGATGAACTCCCAGACTAATCTGGGAAACAGTGGCATATGGGATTGGACATGTTCAGTGTTCAATGCAATTACCTTTGTATCCACTTTAGCTTCTGGATCAGATCAAATTCCTAAAGAACCGCCGATAGAGAAAACCTTGCGGGCTTCCATTGCTGAGATATCTGTTGTTCTTTTGTTCAGTGATGAAATGGATGCTGGCAATTCCAGTGTTCCTATCAGTCAATTCAATGACATGAGAAATTCTGAAATGTTTTCAAGCTGCCTTTCCTTTGCACATTTTGAGCAATCAATGATATCTCCTGCTCCTGCTGCCAGCTTGAATATGCATCACGTTGAAGCCAAGTGTCAGAACATTCATCTTTCCCTGGAGACATATCCTGAAAACCTAAGTCTCAAGGGATCAATTGCTGCTATAAAGCTTGATGAATACTATGGCAACTGA</cdnaseq>

Protein Sequence

<aaseq>MMKRLCKSLLKKRLGDLILGDLDLDQFDLQLTRGTLHLSDIALNADFVNRKLSGSAIMMKEGSIKSLLVRIPLLLNMRDCCEIVVEDLELVLAASVSSEDPSGDTECSVSGSNTDDTQKSVQAKRNESDGNQCSTSASRDVDKGVQRIANAVTCFLTNFNIKLKNSYVVFDPQNSLDNKVPEFNRSLVFRIKETEFGTNLSTDGIIKLHNFVTFHEAVIEFLKMDDVDAHALLQDDLDRGPADISSGHSTTAVLTGPIGGFSGKLNLSIPWNGLNFKKLDADISLNSLELRLQLSSIQWLMDVWDSLQRRNLVHEQSYAHNTADISRSASSYVSSSSKSGSGSVIASREHLTEDTFSQLRQEKTQEPSLTMPYLIPDWIPVLIHEDHGDPDSVCDESIDQFFECFEELMNSQTNLGNSGIWDWTCSVFNAITFVSTLASGSDQIPKEPPIEKTLRASIAEISVVLLFSDEMDAGNSSVPISQFNDMRNSEMFSSCLSFAHFEQSMISPAPAASLNMHHVEAKCQNIHLSLETYPENLSLKGSIAAIKLDEYYGN</aaseq>

Gene Sequence

<dnaseqindica>1..153#1012..2048#2490..2638#3489..3742#3837..3903#5133..5137#ATGATGAAGCGGCTGTGCAAGTCGCTGCTGAAGAAGCGGCTCGGGGATCTGATCCTGGGGGACCTCGACCTCGACCAGTTCGACCTGCAGCTCACCCGCGGCACGCTCCACCTCTCCGACATCGCCCTCAACGCCGACTTCGTCAACCGCAAGGTGAGCCCCTCTCTCTCTATCTCGTGCCCCGACCCGTGTGTTCGATTAGGATGCACCCGCCCGTCGTGATTAGTGTGCTATTTGCCTGAGGTTGAAATTCTGGTGGCAGAGATGGGAATTGGGTGTTTGGGGATGGGAATTTTGTTTTTTTTTTGTTTTTGTTAGAAAAAAGAATTTTCCTGTTTAGTTGCTTGGTGGATTCAACTCTGTATGATTTTGATCTCGATTGGTTGCTAGCATGAGAGTGTGGGCTTGAAATTTTGGTCTAGAATTTTTTGTTGCAGAGGAAATAATCTGTTCGCAGGAAAAAAAAGGAAGGCTTTTTCCTTTCAATCAGTAACCTCGGGTATGGGTACAGTTCAGGGTTATTTGTGTTCATTTCATGGCTAAAGCTCATGATCGCAGGTAGAGTATTAGGGTTTAGGAGAAGTGGAGAAGGGGTTATAAAGCTTATTTGCAATTCACCTTTTTCAGTTGGAGTGTTGGGACTAATCCGATACAGTGTAATGTTTGTAAATTATGTTGAATGCAAAGCTTCTAGAATACAATAAAGTTAACAGAAAGTATCAAAGCTGGAGTAGGTGATTGTTCTTTTCTGCTAACCTGATTTTTTGTGGTGAGTAGCATACAGTAGTCCTCTTATATGTGCATGAATTCACCACTAAAGACACATCTATGTTCAACATTTTGCGATCCATGAGGATCATGGCGCTGCTGGTAGCCCAATATGATACATTTGTTCATTCACAAGTGTTGAATACTTGAATAGAAACTTATACCGCAAAACTTGTGAAACCCACTAGATTTTGGGTTTTCCAGTTACTTTATTAAAACAGTTCTATTTTTTTCCCTTTCCAGTTGTCAGGATCTGCTATCATGATGAAGGAAGGATCGATAAAATCCCTGCTAGTTAGAATTCCTCTACTATTAAACATGCGCGACTGTTGCGAGATTGTCGTGGAGGATTTGGAACTTGTGCTTGCTGCATCTGTTTCTAGCGAAGATCCTTCTGGTGATACTGAATGCTCTGTTTCTGGTAGTAATACTGACGACACACAGAAATCAGTCCAGGCCAAAAGAAATGAATCTGATGGCAATCAGTGTTCTACCTCTGCATCTCGAGATGTCGACAAAGGTGTCCAGAGGATAGCTAATGCTGTCACATGTTTTCTTACCAACTTTAACATCAAGTTAAAAAACTCTTATGTTGTATTTGATCCTCAAAACAGTTTGGATAACAAGGTCCCAGAATTTAATCGATCACTGGTTTTCCGAATCAAAGAGACCGAATTTGGAACCAATCTTTCAACAGATGGTATAATCAAACTTCACAATTTTGTGACATTCCATGAGGCGGTCATTGAGTTTTTGAAGATGGATGATGTTGATGCGCATGCACTTCTTCAGGATGATTTGGATAGAGGACCAGCAGACATTTCATCAGGTCATAGCACTACCGCGGTCTTGACAGGTCCTATCGGTGGATTCTCAGGGAAATTGAACTTAAGCATCCCATGGAATGGCTTGAACTTTAAGAAACTTGATGCAGATATATCTCTTAATTCATTAGAATTGCGGTTACAACTGAGCAGTATCCAATGGCTCATGGATGTGTGGGATTCTCTCCAAAGAAGAAATCTAGTACATGAACAGAGTTATGCCCATAATACCGCAGACATATCTAGATCTGCCAGTTCATATGTATCAAGCTCTTCAAAATCAGGTTCAGGTTCTGTGATAGCTAGCAGGGAACATTTGACAGAGGACACATTTTCTCAACTCAGGCAAGAAAAAACACAAGAGCCTTCCCTGACTATGCCATACTTGATTCCGGACTGGATTCCAGTGCTTATCCATGAGGATCACGGTGACCCTGATTCAGTTTGTGATGAAAGGTTTGTTCCTTTTTGTTTTTCATCTTCCTTTCTTTTCATGAAAGTTCAATGATATTCACTGCACCTTTGCAACTGCCATCCTTTTTTACATATAGACATTTCATCAAGAGTATACTTTTGACAGAACTGTTGTCAAATAAATAATTTTTGAAATGAAATGCATTTGCCTCCCATTTGTATTTCCATGAATAGGTTTGGCCAGATGTATTACACAGAACTTTTCTCCCCATCTTCGTTATATACTATGTACTCTTGAAGGTTGACCATGTACAAATCCTCCTTTTCTTTCCGTGCAAAAAAAAGAAAAACATTTTTGGGTGCTTGTGCAAGCTATTTTCTTGCTAAGTTACTTGCCTTTAAATTTCTTACGGGAAGCAGTTTGTTTAAACCAAATAAAGAATATACATAACTACACTACTAATATGTTGTTATCTTGGACAGCATCGACCAGTTCTTTGAATGTTTTGAGGAACTGATGAACTCCCAGACTAATCTGGGAAACAGTGGCATATGGGATTGGACATGTTCAGTGTTCAATGCAATTACCTTTGTATCCACTTTAGCTTCTGGATCAGATCAAATTCCTAAAGGTACTATGGTTTAAACCTTTCAATTTTCTATTGGTTGTCCACATTATACACTTCTCTTGCAGGGATACAGAACCCTTATCATATGGATTTATTTATTGTTCTTATTGTGCTTGTTTACCACATATTTTTTTCTCCTGACACTCTTTCCTGTGGAGTATTCTTGGACAATGTTCTTCAGCTTCAATTTTCTTTTACTCTTGAGCATCATTCATATCAAGCAGGATCTTTTGCACTTTCCATGAAAGACAATGTTTGACTGTTAGCTCCTGAGTAGACTGAAAGGAAAATGTTGTAGACCACTGGTTAAAATAACAGTTTTGTCTGGTGTGTAGTAATAATACATTGATCCACTGAAAACATCTCCTGTTAGTTGGTATTACACTGGTGATACTCAGGGAATAGCACTGATACTCACCAATGAAACTGCACGGTACAATTTAAAGTTATTATTGTACCATCCCTACCTTGGACTAGTCCACCTTATACAAAACCATACTGCATGAACTGAATACTTGAAACATGCAGAAAAACGAAAATTACTGTTATCTCTTGAATGAAGGTCAGGTAAAAGGTACACATGCTAGGTTATGTTGGCTTATGAATAATGACAGATGTTATATGTTCTAAGATACAGTAACAGTCTGGTATCAACAGATGCAACTTACGAGTAATGAATTCTCTCCATTCTCTTGCTATTAGCAAACCTATCAAGCATGTCCAAATATCTGTTGGATGTATTTCTGGCATTGAACCAAGTATCTGCAGTGTTTTACTTTTTCTGGCTAAATTATCAGAACATTTATATATTGCATCACTTTGTTACTTATTTTTCCTTTTCATTTCCTAACAGAACCGCCGATAGAGAAAACCTTGCGGGCTTCCATTGCTGAGATATCTGTTGTTCTTTTGTTCAGTGATGAAATGGATGCTGGCAATTCCAGTGTTCCTATCAGTCAATTCAATGACATGAGAAATTCTGAAATGTTTTCAAGCTGCCTTTCCTTTGCACATTTTGAGCAATCAATGATATCTCCTGCTCCTGCTGCCAGCTTGAATATGCATCACGTTGAAGCCAAGTGTCAGAACATTCATCTTTCCCTGGAGGTCTGGTCTGCTTCCACCAATAGCACTTTTTCGTAGTTTATATCTCCTAATTTTATGAAGCTTGATTCTAATGTTATGTTCTTGATGTTTGCAGACATATCCTGAAAACCTAAGTCTCAAGGGATCAATTGCTGCTATAAAGCTTGATGAATACTATGGCAGTAAGAACAATGATTCAGATCATCCAAATCTTGGTGCTGCTTTCTTGAACAATAATTTTTGCAGAGAAGTTCAAGCTTCTCTCCCTCAATCTGTATTTGCTTATCAAGATTACCATGAGGAAACATCACGCCGTCATACCAACAATTCAAATGACCTCACTAAGGTCGAATTGCTAAACACGTTTGGTGAGTGCGTATTCCACTATGATGTCAGTTCCTCAGGTCAAGATGGCAACCCAGTAAGCTCAACTTCACTATCAGTCTGTTTGGCTCCTTTGGTTTGCTGGGTGCACTTTCACACAATATATATGCTACTGAATTTTATCAATAAAATCGAGTCTGATGTTTTGCATGGGGAGGATAAAATTCATAGGAAGAATGACGAAAAAAATGTCAATTTGTCTATGAAGTCAAATGTTTCTTTGGGAGGAAGCCAAAAGGTTCAGATAGCCCTGTCGCCTGCAAGAGTCATCTTTTGCTTTCCTTCTGAATCATGGGATTTGAGCTGCCCATCCATGCTGGATAAGTTCCTTGTCATTGACCACACACCATCTCTGAAATCAGGAGCAGATTCATCTCCACATCAAAATGAAATGCCTAATGATGTCAATGCAATCACACCATCTACTTTGGTCCATTTGGCTACAGGGAACTTTGACATCTATTTGGTTAGACCAGTTAATGATGAACTGAATGCTAGAACCTGTTCTCTGAGTAGGCAAACTTTCTCTTCTCTGAAGATTTTCTCTGTTACCGGATCCAATTGTCATGAAACTGGCATTACGATGCTCTGGAAGAAGTATCCTTTAAAAGACCCTGAGATGGTGAGCAAAACTTGGAGTTTGCCAAACCTGCATGAGCAAAAGATTGCTCAGAACAAAAATGGTAAATGGGTTGGTGTTTCCTCTTCTACAACCTCAGAAGATCTTGAGGAATCAAGTTCCAGTATACGCAGGGAGCTCCTCCGGAGCACAGAGTTTTTGTTGCACATTAAACTTTCTTGTGTCTCAGTTCATCTCAGTAAGAAGGACTGTGGGATACTAAACCATTTGCTAAAAAACATCCTTGATGGTCTTTCAGATGGAGCAACTGGAAATTTTGAAAATGACAGTGACAATTGTATGCCAATCCATGATACTGCTAGCCAAACATCTGTCATTTTTGAATGCAGCATCTTGGATATCTGCACTGAATTGGATGAAACTGTTGAAGTTGGTCCTTTATTGCAGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022665