BGIOSGA022683

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Revision as of 13:21, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022683| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022683, complete gene.| tag = OsI_225...")
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Gene Name

BGIOSGA022683

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022683, complete gene.

LocusTag

OsI_22508

Ensembl Transcript ID

BGIOSGA022683-TA

Ensembl Protein ID

BGIOSGA022683-PA

Length

6935

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:10196667..10203601

Sequence Coding Region

10196667..10196775,10196878..10197010,10197123..10197194,10197313..10197456,10197670..10197741
,10197937..10197996,10198107..10198360,10199035..10199376,10201266..10201477
,10201828..10201944,10203227..10203601

Genome Context

<gbrowseImage1> name=IndicaChromosome06:10196667..10203601 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:10196667..10203601 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCGCCCTTCTTCTTCCTCCTCCTGCTGCTGCTGCTGCTGCTCGTGGTCTCCTCCTCCTCTCCTTCCGCCGCCCTCCTCTCCGCCAAGGGCGTCAACAACGAAGTGCAAGCTCTGATTGTGATCAAGAACCTGCTCAAGGACCCCCATGGCGTGCTCAAGAGCTGGGACCAGAACTCCGTCGACCCCTGCAGCTGGGCCATGATCACCTGCTCCCCTGATTTCCTCGTCACTGGCCTGGAAGCTCCAAGCCAGCATCTCTCTGGCCTGCTCGCACCAAGCATCGGCAACCTGACCAATCTTGAGACTGTTCTCCTGCAGAACAACAACATAACCGGGCCAATCCCAGCAGAGATTGGCAGGCTGGAGAACCTCAAGACGCTTGATCTCTCCAGCAACAGCTTCTATGGCGAAATCCCCAGCTCTGTGGGCCACCTCGAGAGCCTCCAGTACTTGAGGCTCAACAACAACACCCTGTCTGGTCCATTCCCTTCTGCATCAGCTAACCTGTCACACCTTGTTTTCCTAGATTTGTCATATAACAACCTGAGTGGCCCGATTCCAGGATCATTGGCAAGAACTTACAACATAGTGGGGAATCCCCTCATCTGCGACGCCAACAGGGAGCAGGATTGCTACGGGACGGCGCCGATGCCGATGAGCTACAGCCTGAACGGCTCGCGGGGCGGCGCGCTGCCGCCGGCGGCGAGGGACAGGGGGCACAAGTTCGCCGTCGCGTTCGGCTCCACCGCCGGCTGCATGGGCCTCCTCCTCCTCGCCGCCGGTTTCCTCTTCTGGTGGCGCCACCGCCGCAACCGGCAGATCCTCTTCGACGTCGACGAGCAGCAGATTGAGAACGTGAACCTGGGGAACGTGAAGAGGTTCAGCTTCAGGGAGCTGCAGGCGGCGACGGAGGGGTTCAGCGGGAAGAACATCCTGGGGAAAGGAGGGTTCGGGAACGTGTACAGGGGGCAGCTCCCCGACGGGACGCTGGTGGCGGTGAAGCGGCTCAAGGACGGCAACGCGGCCGGCGGCGAGGCCCAGTTCCAGACGGAGGTGGAGATGATCAGCCTCGCCCTCCACCGCAACCTCCTCCGCCTCTACGGCTTCTGCATGACCGCCACCGAGCGCCTCCTCGTCTACCCCTTCATGTCCAACGGCAGCGTCGCCTCCCGCCTCAAAGCGAAGCCGGCGTTGGAGTGGGGGACGAGGAGGAGGATCGCGGTGGGGGCGGCGAGGGGCCTGGTGTACCTGCACGAGCAGTGCGACCCCAAGATCATCCACCGCGACGTCAAGGCCGCCAACGTGCTGCTGGACGAGGCGTGCGAGGCCGTGGTGGGGGACTTCGGGCTGGCCAAGCTGCTGGACCACCGGGAGTCGCACGTCACCACGGCGATTTGTAGTACTAGGATATGCCACATCCCACCAAAATCCCTTATATTTTGGGACGGAAGGAGTATAATTCTAATGGGTAGAAACACTTTCAAATTTAAGGGCGCCATGCTGGACTGGGTGAAGAAGATGCAGTCGGAGAAGAAGGTGGAGGTGCTGGTGGACAAGGGGTTAGGCGGAGGGTACGACCGGGTGGAGGTGGAGGAGATGGTGCAGGTGGCCCTCCTCTGCACCCAGTACCTCCCCGCCCACCGCCCCCGCATGTCCGACGTCGTCCGCATGCTCGAGGGCGACGGCCTCGCCGACCGCTGGGAGAAGGCCTCTGGCCACTCCACCGCCGCCGACGACTCCCACTCCCAGTATTCCCACCGCACCAGCTCAGACCCGGCGCCGCCCGCCGCCGACTTCGCCGCCACCTTCGGCCGCTGCTTCTCCGACCTCACCGACGACTCCTCCCTCCTCGTCCAGGCCGTCGAGCTCTCCGGCCCCAGATAA</cdnaseq>

Protein Sequence

<aaseq>MEPPFFFLLLLLLLLLVVSSSSPSAALLSAKGVNNEVQALIVIKNLLKDPHGVLKSWDQNSVDPCSWAMITCSPDFLVTGLEAPSQHLSGLLAPSIGNLTNLETVLLQNNNITGPIPAEIGRLENLKTLDLSSNSFYGEIPSSVGHLESLQYLRLNNNTLSGPFPSASANLSHLVFLDLSYNNLSGPIPGSLARTYNIVGNPLICDANREQDCYGTAPMPMSYSLNGSRGGALPPAARDRGHKFAVAFGSTAGCMGLLLLAAGFLFWWRHRRNRQILFDVDEQQIENVNLGNVKRFSFRELQAATEGFSGKNILGKGGFGNVYRGQLPDGTLVAVKRLKDGNAAGGEAQFQTEVEMISLALHRNLLRLYGFCMTATERLLVYPFMSNGSVASRLKAKPALEWGTRRRIAVGAARGLVYLHEQCDPKIIHRDVKAANVLLDEACEAVVGDFGLAKLLDHRESHVTTAICSTRICHIPPKSLIFWDGRSIILMGRNTFKFKGAMLDWVKKMQSEKKVEVLVDKGLGGGYDRVEVEEMVQVALLCTQYLPAHRPRMSDVVRMLEGDGLADRWEKASGHSTAADDSHSQYSHRTSSDPAPPAADFAATFGRCFSDLTDDSSLLVQAVELSGPR</aaseq>

Gene Sequence

<dnaseqindica>1..109#212..344#457..528#647..790#1004..1075#1271..1330#1441..1694#2369..2710#4600..4811#5162..5278#6561..6935#ATGGAGCCGCCCTTCTTCTTCCTCCTCCTGCTGCTGCTGCTGCTGCTCGTGGTCTCCTCCTCCTCTCCTTCCGCCGCCCTCCTCTCCGCCAAGGGCGTCAACAACGAAGGTAAGGTTCAGTTCAGTTCATCCCTTCCTCTCTCTTGTTTCCTCTGTTCGTTTCTTGCATTTGGGTGTGTGCTGATTGATTGATTGGTTGGTTGATTGGCAGTGCAAGCTCTGATTGTGATCAAGAACCTGCTCAAGGACCCCCATGGCGTGCTCAAGAGCTGGGACCAGAACTCCGTCGACCCCTGCAGCTGGGCCATGATCACCTGCTCCCCTGATTTCCTCGTCACTGGCCTGTATGTGAACTCTCACCTTCCATTGCTTCACATTCTCAATCCACCTCTCACCATTTGTTCTCTTCTCTTCTCTTCTCTGCTGCTTCTCTGAATACTCTGAATATTTTTTCAGGGAAGCTCCAAGCCAGCATCTCTCTGGCCTGCTCGCACCAAGCATCGGCAACCTGACCAATCTTGAGACTGTGTCAGTAGTGTTCTTCTTCTTCTTCTTCTTCTACTTCACATCAATCCATAGCCTTATCACGGTCAGTTCTTGTACTTAAACAGAGTGTTTCTTTTCTTTGATGTGCTGGTGGGTGCAGTCTCCTGCAGAACAACAACATAACCGGGCCAATCCCAGCAGAGATTGGCAGGCTGGAGAACCTCAAGACGCTTGATCTCTCCAGCAACAGCTTCTATGGCGAAATCCCCAGCTCTGTGGGCCACCTCGAGAGCCTCCAGTACTTGTGAGTCGAGAGCTCCACTGTTCAAAGCCTCTGAATACTGTTCCATTTATTTTGTAGTAAAGATAATTATAAACACACTGTTCTTGATTATGATATCTAGATATGTAGCAGTATCATATCATATCTACACATAGTTATTGTGGTTGTTCTCCGTTTTTTTGTTGCCATGTTAATTAAGTTTGAGTTAACTCTGTTGCTGTGAAATTTGATCAGGAGGCTCAACAACAACACCCTGTCTGGTCCATTCCCTTCTGCATCAGCTAACCTGTCACACCTTGTTTTCCTGTGAGTAAATTCATCTCAGTTTTGGGTTGTTGCAATTAATCAGTTCGATTTTGTCTCAACCTGCTTACTGGTGTCATTCATTCAGAGATGCTTTGTCTTGCTCTGCTCTTTCTTGAGCTATATTAACTTATTTTAAGTGTACTATTCAGTTTGGTTTGTCTCATCACTCTGCATACACTTTGTGTTCTTCTTCAGAGATTTGTCATATAACAACCTGAGTGGCCCGATTCCAGGATCATTGGCAAGAACTTACAAGTAAGGCTGCAGTTTCAAGTTCATCAATTCTTCCAACAAGAAGAAAAAAAAATCTTCCAATTTTTTTTTGTTGGGTTCATGAACAATTGCATATGGTTTTTTTCTTGCAGCATAGTGGGGAATCCCCTCATCTGCGACGCCAACAGGGAGCAGGATTGCTACGGGACGGCGCCGATGCCGATGAGCTACAGCCTGAACGGCTCGCGGGGCGGCGCGCTGCCGCCGGCGGCGAGGGACAGGGGGCACAAGTTCGCCGTCGCGTTCGGCTCCACCGCCGGCTGCATGGGCCTCCTCCTCCTCGCCGCCGGTTTCCTCTTCTGGTGGCGCCACCGCCGCAACCGGCAGATCCTCTTCGACGTCGACGGTAAACCTCGGTCTTTTCTCGCAGCTAACCTACCTGCATTTCATCATCCATAATTCTTAGAGAAATTATTTTCAGGCTTTTGTCCAGAGTTTTATTGTGGATTATTTGCTCCACGCTTCTTTAAAAAAAAAACGATTTTTCGAAAAAAAAAGACTATTTGTTCTAAGCTTTTGGTACCTTGTAATACCTTAATTTTACGCTAGTGCCTTCTTCGAAGTCGATGGTAACATCAATCTTTTTCCAAAACAACCTGCATTTCGTCATTAATTCCAAGAGAAATTATTGTCAGCTTTTGTCTAAGATTTTTGGTACGGATTATTCGCTCCATGCTTCTTAGAATTCTAAAAAGAAAAAAAAAACTTCTGCTGTCATATTCACCTGTTCTAAACTATTGTGAAGTTTATTTCTCAAAATATTGATTTATTGTGTTAAGTAAGTAAACAATCCGCCTCAATAATTCACACAAAAATCTTATTTCAAACATCGAGTACACAAAATTATAGCGTAAAATTTGATATCTCATGACATCTAAATAATGCAAACCCACCGACATTCACACTAGTGGTATCTTCCGAAGGACCGTAAAATCACTCCAATTTTGAACACTAACAAGGTCTATTACTATTACATCTCTAATAAATCTGATTATTAATGTTAATAAACTAAAATTGCAGAGCAGCAGATTGAGAACGTGAACCTGGGGAACGTGAAGAGGTTCAGCTTCAGGGAGCTGCAGGCGGCGACGGAGGGGTTCAGCGGGAAGAACATCCTGGGGAAAGGAGGGTTCGGGAACGTGTACAGGGGGCAGCTCCCCGACGGGACGCTGGTGGCGGTGAAGCGGCTCAAGGACGGCAACGCGGCCGGCGGCGAGGCCCAGTTCCAGACGGAGGTGGAGATGATCAGCCTCGCCCTCCACCGCAACCTCCTCCGCCTCTACGGCTTCTGCATGACCGCCACCGAGCGCCTCCTCGTCTACCCCTTCATGTCCAACGGCAGCGTCGCCTCCCGCCTCAAAGGTAACCAAACCAAATTCGTACTACAAATTATTATTTCTAGTACTGTATCTATTTTTCCTTTCTTCTCAAGATTATGAATTGCTCTTTTTTTTTGTCCTAAAATATATAACAATCTAGTAGTATGAAATGAGATACATCATAATAATATGAATTCAAACAGATTTTCTGTTCGGGTTCGTAATGTTAGGATATGTCTCATCTCAGTACTAGGTTGCTATATTTTACTCTCTCTATTTTAAAACAAAGTAAAATAGTACGAGATGCGATACATTATAATACTATGAATTGAAACAGGCATTATGTTCAGATTTGAAGTATTATGATATATCACATCTAGTACTGAATTCTATATTTTAAGAGATAAATTTTACCATTTTTGAGAGGTATGAAAATGTACCAAAATTTATTGCAAATTTCCGTAACTCCTAGGTATATATACCAAATTTTATACTGAAAAATATAGTACATCTCAATATCTCATTAAGAACGGTAAAATCACTCATTTTGAGGGAGAGGCAGTACAAGATTCAGACAATGACCACGGACAGAGTCCGGTAGAATTCCTCCAACATGCAGCAGCTCGAATGTTCTTTTCTCGATATGACAGCAGAAATCTGAGTGGAACAACAGCAGCAGCATATGTTCTTTGCTGGATTTTTCATATCATACCGGACCTAAAAGAGAGGTGCAGAATCGAAAGACTGAAGCTTTCAGTTCAGGCCGGCAAAGAAACAAGTGGAGCATGATAAGAGCTCAGAATTGGATTCCATTGCCCTGAAAAGTAATTAAAAAAAGCGACTAAATTTATCTATCACGACGAGAAGAGAAGAGGAGGAGAATGTGATTCCCAATCAGACACAAAAAAAACTCCAGCTTTATTCCTTCCTTTCCGACTGCACTCACCCACTTTGAATCTCTGACCAAATGATGATGATGAATTGATGTGGTTTCCTTTCAAAATTAACTTGCAAACAAATTGTGACGACGACAGACGCCATTGATGTGCTTCCGTTCGCTGAGGGAGCTAGGATGTGATTCTCAATTAGATACAACCAAAAAAAAAGAAAAATCTTTGCTTTATTCCTTCCTGTCCGAACTCTGAAACTCTGAATTCTCTGACCAAATGACGGTGATCGGTGCATGAACAGCGAAGCCGCCGGTTTCAATCCCTGAAGTAGAATGTGATTCTCAATCAGACACAAACAAACACAAAAAAGTTCTTTCCTTTATACCTTTCTGTCCGAATGACTCACTCAATCTGAAACTCTGAATTTCTCTGACCAAATGATGGTGATCGGCGCCTGAACGGCGAAACTGCTGGTTTCTTTTTTTTTTTCGAACGGTCGGACCGTTGCCGACGTTTTATATTAAGAAGAGATATCCCATTTTAAGAAGAAAACGGGATCAAACCTTACAATGCTCAGTTAATTAGGAAAAACTGAGCGAAAACCACAACTACAACACCACACTAACAGCTAACCTAACCTAAGCTACCACGACGGAGCCCGAAAAACCGCCGGTTTCAATCCCTGAAGTAGAGTGTGATACCCGATTAGACACAAACCAACACAAAAAATCTTTACCTTATACCTTTCACTCCTTCACTCACTCTGAAACTCTGAAACTCTGACCAAATGATGAATGATGATGATGATGAACTGACGATGCGGTTCCAAAACTAACTTGCCGGTTTCAATCCCCTGAAGTAGAATGTGATACCCAATTAGACATAAACCAACACAAAAAATCTTTGTTTTATACCTTTCACTCACTCACTCACTCACTCTGAAACTCTGAAACTCTGACCAAATGATGATGATGCTGAATTGATGTGGTTCCAAAAACTAACTTGTTGCAAATGAAACATGCTACTATAAAATGGCATGCAGCGAAGCCGGCGTTGGAGTGGGGGACGAGGAGGAGGATCGCGGTGGGGGCGGCGAGGGGCCTGGTGTACCTGCACGAGCAGTGCGACCCCAAGATCATCCACCGCGACGTCAAGGCCGCCAACGTGCTGCTGGACGAGGCGTGCGAGGCCGTGGTGGGGGACTTCGGGCTGGCCAAGCTGCTGGACCACCGGGAGTCGCACGTCACCACGGCGGTGCGGGGCACCGTGGGGCACATCGCGCCGGAGTACCTGTCCACGGGGCAGTCGTCGGACCGGACCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGCCATGCTGGACTGGGTAAGTATTATTTTATACTATTATTAATTCATTCGTTAATTAATTCGTTTGATTGATTAGCTTAGTGCAATCTAGTACTCCCTCCGTCCTAAAATATAAGAGATTTTGGTAGGATATGATATATCTTTGTAGTACGAATCTAGACATGCTCCCTGTCATGTCCAGATTTGTAGTACTAGGATATGCCACATCCCACCAAAATCCCTTATATTTTGGGACGGAAGGAGTATAATTCTAATGGGTAGAAACACTTTCAAATTTAAGGGCGCCATGCTGGACTGGGTAAGCTAGTATATATGTGCTACTACTGATTTCAATTCGTTCCGTTAATTCTTTTGATTGATTAGCTTGTGCAATCTGGAGTAGTATAATTCTAATCGGTAGAAACACCTTAAAGTTTACTGTCTCCGTTTCATATTGTAAATCACTTTAACCTTCTTTAAAGTCGAACTTCAGTTTTATCAAGTTTATGAAAAAAACAAGATAGCATTTTGAACACTAAACAAATACATTTGTCAAATTATATGCAATGTTAGATTTAATAAAATTGATTTGATATTTTAGATGTTGCTAATTTTTTTCTATTAATTTAATCAAACTTAACAAAATTTGACTAAAAAAGAGTCAAAGCTACTTATAATGGATGAAGTAATTAAGAGTTAGAAGATGACACTAATACTTTCTAGTATAGTTTTACGGTCCTTAACAAGGTACCATGAGGTACGTACCAAAAATTTAGTGTAAATATGGTACATCATAGTATCTAGGTACCAAGAGGTACCAAATTTATAATAGAAAAAGTGGTACTTCATGGCACCTCCTCAAGAACCGTAAAATTGCTCTCCTTTCAAAAATTCTAAAAAATTGAGAATGTGAATATATTAGGGAATTGCTAAAAGAATGTTACAAGTTCTTTTTGTTAAGAAACTTTGAAATGTAGCTATTCAAGTATTATACCTTATTTCATTCAAGAGACCTGCACAATTAAATTCAATCTAGGCGTGGAGAAAAATAAAATCTCAGCTAGGAAAGATGCGGAACTATTCGCAACTTGTTTTTTTTTTCTCTCAGAATGAATTATTAGCCTCGCATTTTCAATACATTTTTTAGAATGAAGTTCAGTACCACAATATATGTACTTAATTTTTTTAGATTGTTTTACTCATTTTTATAGGGAAATTTTGTAAAAAAAAATATTCACTGAAATTTTTCATAACTATTTGAATAATCCCCATGTAAACCGAGCAATCACGATCGGTGTTCTTTTCTATTGAAGATAAAGGAAGATGTTACAGTACGCAAAATAAAAAACCATGCATTAGTGCATGAATAATGAAGTTTCAATTATTATAAACTTGGAAAACAGATTTATTTGATATTTTAAAGTAACTTCTATATAAATTTTTTTTATACAAACACACCGTTTAACAGTTTAAAAAAAGCGGTAACAAAAAATGGAAGTAAAATCTGCATCTTAATCCGAACACCACCAAATGTGATTGTGTGTTGTTGAGGGCATAATGTAGAGAAACTGTGACGACGATGCAAAAGAAAAAAAATGCAGGTGAAGAAGATGCAGTCGGAGAAGAAGGTGGAGGTGCTGGTGGACAAGGGGTTAGGCGGAGGGTACGACCGGGTGGAGGTGGAGGAGATGGTGCAGGTGGCCCTCCTCTGCACCCAGTACCTCCCCGCCCACCGCCCCCGCATGTCCGACGTCGTCCGCATGCTCGAGGGCGACGGCCTCGCCGACCGCTGGGAGAAGGCCTCTGGCCACTCCACCGCCGCCGACGACTCCCACTCCCAGTATTCCCACCGCACCAGCTCAGACCCGGCGCCGCCCGCCGCCGACTTCGCCGCCACCTTCGGCCGCTGCTTCTCCGACCTCACCGACGACTCCTCCCTCCTCGTCCAGGCCGTCGAGCTCTCCGGCCCCAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022683

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022683&oldid=45208"