BGIOSGA022717

From RiceWiki
Revision as of 13:22, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022717| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022717, complete gene.| tag = OS06G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022717

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022717, complete gene.

LocusTag

OS06G0287500

Ensembl Transcript ID

BGIOSGA022717-TA

Ensembl Protein ID

BGIOSGA022717-PA

Length

5482

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11319718..11325199

Sequence Coding Region

11319718..11319833,11320082..11322832,11323753..11323934,11324800..11324936,11325029..11325199

Genome Context

<gbrowseImage1> name=IndicaChromosome06:11319718..11325199 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:11319718..11325199 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGACGGTGTTGAGCATGGCAAGGTCGCTGGTGGGGAATGCCATCACGAAGGCCGGAGAGGCAGCTGCTGCAGAGATAAGCTTACTGATTGGTGTGAACAAGGAGATCTGGTTTATCAAAGACGAGCTGAAAACGATGCAAGCATTCCTGATGACAGCTGAAGAGATGGAGAAAAAACCCAGGCTGTTGAAAGCGTGGGTGGAGCAAGTAAGGGATTTATCTTTTGACATTGAAGATTGCCTCGCTGAGTTTATGGTTCACGTGGGGAGCAAAAGCTTGTCACAACAGTTGATGAAGCTCAAACATCGCCATCGCATTGCCATCCAGATTCGCGACCTCAAATCAAGAGTTGAAGAAGTGAGCGATAGGAATTCACGGTACTCATTAATCAGCCCTAACACTGATGAGCATGACACCTTGAGGGATGAATTTCGCTACTGGTCAGCTAAGAACATTGATGAGGCTGAACTTGTGGGTTTTGATGATGCAAAGGAAAGTATACTTAATTTGATCGATGTCCATGCTAACCATGGTCTTGCTAAAGTGATCTTTGTAGTTGGCATGGGCGGTCTAGGGAAGACAAGTCTTGTTAAAAAGGTTTACCATAGTATTAATATTGTTAATAATTTCTCATGCCGTGCTTGGGTCACTGTGTCACAGTCATTTGTCAGGACAGAGCTGCTGAGAGGACTAATCAAGCAACTTTTGGGTGGTGATTCGGAAAATGAACACTTCAAAGGTCTTCAGAGCATGCAAAGGAATGAGAAAGTGGAAGACCTCGTGGAAGACTTGAAGCAAGGTCTAAAAGAGAAAAGGTACTTTGTTGTTCTAGATGACATGTGGAGCATAGATGCATTGAATTGGCTTAATGAATCTGTTTTTCCTGACTCTAATAATGGAGGAAGTCGCATAATAGTAACCACGAGAGATGCCAGCATAATTCAAAACTGTGCTTATCCTTGTTATCTGTACCGCCTTGAACCCTTAAAAACAGATGATGCTAAACAATTGCTGCTGAGAAAATCAAATAAAAGTTATGAGGACATAAAAGGAGGCAAGGCTGAGAAGGTGTTTGATAGGATACTAGAAAGATGTGGAGGCTTACCACTAGCTCTTGTTGCGATAGGAGCTGTCCTTCGCACGAAATGCATAGAAGATTGGGAAAAACTGTCTCTGCAGCTATCTTCAGGGCTCAAGACAAAGTCAAGTCTTGAAGAAATGACTAGAGTAATTACACTTAGTTATACACACTTGCCATCTCATCTCAAGCCATGTTTTCTGTATCTTAGCGTTTTCCCAGAGGATTTTTCAATAAAAAGGAGATGTGTGGTAAACAGATGGATAGCAGAGGGCTTCGTTGATGCAAAGTATGGAATGGCTATGGAGGATGTTGGAAATAGTTATTTTGATGAACTCATCAACAGAAGCATGATTCAACCATATAGGTTTTACAGTCATGGGTCAGTACTGTCTTGTGTACTCCATGATATCATGCGTGATATCGCAATTTCTATTTCTGCAGAGGAGAATTTTGTTTTCGTGACTAAAGGGTTTGTCTCTGGTACTCCGCCTGAAAATATCCGTCACCTTTCTATTGATGGGAGACAGGAGTCAAACCTAAGCTTTGATCTGAGCCATGTCCGATCATTAAGTGTCTTTTACAAACCTAGGGAGCAACTAGCTTCACTATGTCGTCCGTCCCAACTAAGGATGATCCGAGTATTGGATCTAGAGTTTAGTCTACGTCGGGTAACACAGAATGACATCAGGAACATAGGATTGCTTCGTCACTTGAGGTACCTGTCTGTTAGGAAATGTTCATACATTTATAATCTTCCAACGTCTATCAGGAAATTGCAAGGATTGCAAACTTTGGACATGAGGAGATCACTAATTACAAAACTTCCTGCAGAAGTAACTAAACTCCAAAGTCTTCGTAGCCTCCAGTGTAGCACAGTTGGAGCTTACAGATACTCCGATTTCAATATCTATCGGCCCAAAAAATCCTTCCTCACGATAATGAGATTTCCCTTGTTACTACCACGTTTCATTAGCCGAGACAGATCTTCGCTGGTGGTGGCAGAGTTCCTAAAGGGCTCATCCAGCTGTTGGACTCGATCAAGTGGCGTGAGTGTGCCAAAAGGAATAAGGAGCCTAAAAGAGTTGCAGATTCTTGGGATTGTGGATATCTCACGAAGTAACAAGAGTGTAGTCCATGAGTTGGGGGAGCTTACTCAGCTGAAAAAATTATCCGTGGCTGGCCTCACCGGGAAGAATATCAATCCTCTATTTGAAGCTCTCCAAAATCTTTCTTCACTATGTTCCCTTAGTATGGAAGCCAAATTACTTCATAGCCTCCGGGCACTTGAGCAGGTTTCTTCCCCGACCCCCTTCCTCCACACCCTCAAATTGCGTGGACGCCTTGATAAAATCCCTAGTTGGGTTGGTACGCTTGGGAGATTGGTAAAGATTCAACTAGTTCTGACAGGGCTGAAGGATGCTGAATCCATAAGTATTCTTGGGGAATTGCGCAGCCTCAAATGCCTCCGTCTTTTTTACAACGCGTATAATGGACAAGAGCTACTTTTTTCCCCGGGGAAGTTTCCAGAGCTAACGATTCTCATACTTGAAGATTTAAAGGTGAGAAAGGTGACTTTTGAGGAGAGAACCTCACCCAAGCTGAAAAAGATAACCATTCATGATTGCTCCGCAGAGTTAACATTCTGTGGTACTGCCAGCCTCCAAAGCTTTGAGAAAATTCAGTATCTTGAAAAGTGGAAATTGGTGAAGGAGGAAACGCATAGGCGTCTGCAAGTGGGTCAGAGCCAAAGCAGCCATACCGTAGAGGATGAAGTCGTTTGCGAAGAGATAAGCACACTCTCAAGCTGGTTTTATCAAGTGATGATCTCCTCCTCCATTGGCATCTCAGTTCGTCCCTGCTTCTGCCGCTGTGCACACCTCGCTGCTCCGAGGAGGGGTGCTGATCTAAGGAAGCTCCCACTTTCTTCAATTGCGTCTCACGCTCTCGATTCTTCCCTCTCAGGGAGTTTTCTAGGGTTGATATGTGGACAATCGAATGCAGCTATGCTGTTCAAACCACTGTCAAAAGATGCAGGACAGGATGGGCAGATGTTTATTCAGTGTTCTTGTTCAAATGAAACATATACTATTCTGGAAGAGAATTGTTTTCTGAAGCTCAAAGTTGAAGCTGCAGTCTTCACTGTTTCTGGCAGAACCCAAATTGGTGGCTTGGTGCTGCATAACCTGCAGAGAACGCAACGGCCACTGCTTGTAGCCTTCAAGGATGCTACATTATTGATCATCTCACTACGGTCCCGATCAAACTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAETVLSMARSLVGNAITKAGEAAAAEISLLIGVNKEIWFIKDELKTMQAFLMTAEEMEKKPRLLKAWVEQVRDLSFDIEDCLAEFMVHVGSKSLSQQLMKLKHRHRIAIQIRDLKSRVEEVSDRNSRYSLISPNTDEHDTLRDEFRYWSAKNIDEAELVGFDDAKESILNLIDVHANHGLAKVIFVVGMGGLGKTSLVKKVYHSINIVNNFSCRAWVTVSQSFVRTELLRGLIKQLLGGDSENEHFKGLQSMQRNEKVEDLVEDLKQGLKEKRYFVVLDDMWSIDALNWLNESVFPDSNNGGSRIIVTTRDASIIQNCAYPCYLYRLEPLKTDDAKQLLLRKSNKSYEDIKGGKAEKVFDRILERCGGLPLALVAIGAVLRTKCIEDWEKLSLQLSSGLKTKSSLEEMTRVITLSYTHLPSHLKPCFLYLSVFPEDFSIKRRCVVNRWIAEGFVDAKYGMAMEDVGNSYFDELINRSMIQPYRFYSHGSVLSCVLHDIMRDIAISISAEENFVFVTKGFVSGTPPENIRHLSIDGRQESNLSFDLSHVRSLSVFYKPREQLASLCRPSQLRMIRVLDLEFSLRRVTQNDIRNIGLLRHLRYLSVRKCSYIYNLPTSIRKLQGLQTLDMRRSLITKLPAEVTKLQSLRSLQCSTVGAYRYSDFNIYRPKKSFLTIMRFPLLLPRFISRDRSSLVVAEFLKGSSSCWTRSSGVSVPKGIRSLKELQILGIVDISRSNKSVVHELGELTQLKKLSVAGLTGKNINPLFEALQNLSSLCSLSMEAKLLHSLRALEQVSSPTPFLHTLKLRGRLDKIPSWVGTLGRLVKIQLVLTGLKDAESISILGELRSLKCLRLFYNAYNGQELLFSPGKFPELTILILEDLKVRKVTFEERTSPKLKKITIHDCSAELTFCGTASLQSFEKIQYLEKWKLVKEETHRRLQVGQSQSSHTVEDEVVCEEISTLSSWFYQVMISSSIGISVRPCFCRCAHLAAPRRGADLRKLPLSSIASHALDSSLSGSFLGLICGQSNAAMLFKPLSKDAGQDGQMFIQCSCSNETYTILEENCFLKLKVEAAVFTVSGRTQIGGLVLHNLQRTQRPLLVAFKDATLLIISLRSRSNF</aaseq>

Gene Sequence

<dnaseqindica>1..116#365..3115#4036..4217#5083..5219#5312..5482#ATGGCGGAGACGGTGTTGAGCATGGCAAGGTCGCTGGTGGGGAATGCCATCACGAAGGCCGGAGAGGCAGCTGCTGCAGAGATAAGCTTACTGATTGGTGTGAACAAGGAGATCTGGTAGGTTTTCTTTAATTACTTACGCAAACAAAATATTGGTTTAGGAAAATGTTAACCCTAAACTTTCCAAACTGGTTATTTTCAAACACCCACCCACCCCCCCCCCCCACCCCCCAAAAAAAGAAACAAAACTCCTGGTACCAAGTGGTAAAACCATTTTAAGTGATTATTCGAATTGATTTTCATACTTTAGGTGATAGAATAAATTTAAGCCATGTAATGTCCTAAAATTGTCCTTTCATTATTAGGTTTATCAAAGACGAGCTGAAAACGATGCAAGCATTCCTGATGACAGCTGAAGAGATGGAGAAAAAACCCAGGCTGTTGAAAGCGTGGGTGGAGCAAGTAAGGGATTTATCTTTTGACATTGAAGATTGCCTCGCTGAGTTTATGGTTCACGTGGGGAGCAAAAGCTTGTCACAACAGTTGATGAAGCTCAAACATCGCCATCGCATTGCCATCCAGATTCGCGACCTCAAATCAAGAGTTGAAGAAGTGAGCGATAGGAATTCACGGTACTCATTAATCAGCCCTAACACTGATGAGCATGACACCTTGAGGGATGAATTTCGCTACTGGTCAGCTAAGAACATTGATGAGGCTGAACTTGTGGGTTTTGATGATGCAAAGGAAAGTATACTTAATTTGATCGATGTCCATGCTAACCATGGTCTTGCTAAAGTGATCTTTGTAGTTGGCATGGGCGGTCTAGGGAAGACAAGTCTTGTTAAAAAGGTTTACCATAGTATTAATATTGTTAATAATTTCTCATGCCGTGCTTGGGTCACTGTGTCACAGTCATTTGTCAGGACAGAGCTGCTGAGAGGACTAATCAAGCAACTTTTGGGTGGTGATTCGGAAAATGAACACTTCAAAGGTCTTCAGAGCATGCAAAGGAATGAGAAAGTGGAAGACCTCGTGGAAGACTTGAAGCAAGGTCTAAAAGAGAAAAGGTACTTTGTTGTTCTAGATGACATGTGGAGCATAGATGCATTGAATTGGCTTAATGAATCTGTTTTTCCTGACTCTAATAATGGAGGAAGTCGCATAATAGTAACCACGAGAGATGCCAGCATAATTCAAAACTGTGCTTATCCTTGTTATCTGTACCGCCTTGAACCCTTAAAAACAGATGATGCTAAACAATTGCTGCTGAGAAAATCAAATAAAAGTTATGAGGACATAAAAGGAGGCAAGGCTGAGAAGGTGTTTGATAGGATACTAGAAAGATGTGGAGGCTTACCACTAGCTCTTGTTGCGATAGGAGCTGTCCTTCGCACGAAATGCATAGAAGATTGGGAAAAACTGTCTCTGCAGCTATCTTCAGGGCTCAAGACAAAGTCAAGTCTTGAAGAAATGACTAGAGTAATTACACTTAGTTATACACACTTGCCATCTCATCTCAAGCCATGTTTTCTGTATCTTAGCGTTTTCCCAGAGGATTTTTCAATAAAAAGGAGATGTGTGGTAAACAGATGGATAGCAGAGGGCTTCGTTGATGCAAAGTATGGAATGGCTATGGAGGATGTTGGAAATAGTTATTTTGATGAACTCATCAACAGAAGCATGATTCAACCATATAGGTTTTACAGTCATGGGTCAGTACTGTCTTGTGTACTCCATGATATCATGCGTGATATCGCAATTTCTATTTCTGCAGAGGAGAATTTTGTTTTCGTGACTAAAGGGTTTGTCTCTGGTACTCCGCCTGAAAATATCCGTCACCTTTCTATTGATGGGAGACAGGAGTCAAACCTAAGCTTTGATCTGAGCCATGTCCGATCATTAAGTGTCTTTTACAAACCTAGGGAGCAACTAGCTTCACTATGTCGTCCGTCCCAACTAAGGATGATCCGAGTATTGGATCTAGAGTTTAGTCTACGTCGGGTAACACAGAATGACATCAGGAACATAGGATTGCTTCGTCACTTGAGGTACCTGTCTGTTAGGAAATGTTCATACATTTATAATCTTCCAACGTCTATCAGGAAATTGCAAGGATTGCAAACTTTGGACATGAGGAGATCACTAATTACAAAACTTCCTGCAGAAGTAACTAAACTCCAAAGTCTTCGTAGCCTCCAGTGTAGCACAGTTGGAGCTTACAGATACTCCGATTTCAATATCTATCGGCCCAAAAAATCCTTCCTCACGATAATGAGATTTCCCTTGTTACTACCACGTTTCATTAGCCGAGACAGATCTTCGCTGGTGGTGGCAGAGTTCCTAAAGGGCTCATCCAGCTGTTGGACTCGATCAAGTGGCGTGAGTGTGCCAAAAGGAATAAGGAGCCTAAAAGAGTTGCAGATTCTTGGGATTGTGGATATCTCACGAAGTAACAAGAGTGTAGTCCATGAGTTGGGGGAGCTTACTCAGCTGAAAAAATTATCCGTGGCTGGCCTCACCGGGAAGAATATCAATCCTCTATTTGAAGCTCTCCAAAATCTTTCTTCACTATGTTCCCTTAGTATGGAAGCCAAATTACTTCATAGCCTCCGGGCACTTGAGCAGGTTTCTTCCCCGACCCCCTTCCTCCACACCCTCAAATTGCGTGGACGCCTTGATAAAATCCCTAGTTGGGTTGGTACGCTTGGGAGATTGGTAAAGATTCAACTAGTTCTGACAGGGCTGAAGGATGCTGAATCCATAAGTATTCTTGGGGAATTGCGCAGCCTCAAATGCCTCCGTCTTTTTTACAACGCGTATAATGGACAAGAGCTACTTTTTTCCCCGGGGAAGTTTCCAGAGCTAACGATTCTCATACTTGAAGATTTAAAGGTGAGAAAGGTGACTTTTGAGGAGAGAACCTCACCCAAGCTGAAAAAGATAACCATTCATGATTGCTCCGCAGAGTTAACATTCTGTGGTACTGCCAGCCTCCAAAGCTTTGAGAAAATTCAGTATCTTGAAAAGTGGAAATTGGTGAAGGAGGAAACGCATAGGCGTCTGCAAGTGGGTCAGAGCCAAAGCAGCCATACCGTAGAGGATGAAGTCGTTTGGTTTGATGCCCTATCAAATTTTTGCTAGTGCCCAAGTTCAGAGAAGTTTTGACTTTGGTAGGGCATGCACTATTTAGGCATTTTTCATAGTGAAAGATGAAAGATACGTCACCGGCCAGTCCTTGCTATGCATTGTTTAGTTTGATGTCTAAGTTGTGTCAATCTGACAAAAATGTATGGATATTGCTGAGGTTTCGTATCATATGGTTTGATTTTAGTGTTTGGTTTGCAACCAAAATTTGGTGATGTCAAAAATAGTACCAGCTGATGTCAAGCAACATCACTAAGGCCAGGGGAGGGCTCACAGCCAACAGTCAATATCTGCCTGACGTCCTTTGTATTCTGATCCACTCATCGCTGAAAAGACCAAGCTGAAGAGAAATTGGTCCTTCCTAGTTGCAAGCCTGCAAGCAGCAAACTTCTCATGTTAATAGATCTGAGGAACCAAGCAATATGGAGTAAGCATCACAAGATCAAAGAATCTGAATGTCAAGTAAGTTTATCTATTACTACTTCGTATACAACATTTCCTTGCTTCGCTTACGGGTTTCTTCGTGTTCTCTGGACCACTCTTATTTGTTCAAAAATGATAATTTTGTGCAGTTGTTGATGCCGCCATCCAAGGTAAAGTGGCTAGGCTTGCTCAGCTGGAGAGAGAAGTGAACTGATACCCAAATCACCCCATTCTGCGAATGGTGGAGGAACGAAGTGATCATGACCTGATGGAAGCAACGGATCCCCTCCCTGAGCAGGAGGGAGAGAGCTCGCAGGTGATCACGTTGACGACGAATGACAGGTCAGTCACTTCCTACATGGCAGCTTAATTAACTTGTTTTCTCTTCTTGTTCAGTGTTAGCCATCAGGCGATATCGATGATTTCAACTCACCCTTTCATCTCTCTCGTTTTCTTAACCTAACAGCGAAGAGATAAGCACACTCTCAAGCTGGTTTTATCAAGTGATGATCTCCTCCTCCATTGGCATCTCAGTTCGTCCCTGCTTCTGCCGCTGTGCACACCTCGCTGCTCCGAGGAGGGGTGCTGATCTAAGGAAGCTCCCACTTTCTTCAATTGCGTCTCACGCTCTCGATTCTTCCCTCTCAGGTATGAATTGTTCGATCTGATGTTTTCTCGCGATATGTTACTGCTTCCAGCCTGAGCATTTGAACCAGAAGCTTAGAATTATCGTTTCATCAGGTGTTAGAATTACCTGGGAACTCTACTTTTCCTATTCATTTAGAACAGAAACCATGTTTATTACACTATAGAGGGGAACAACACATCAGGCACGAGTTGTTGTTTTGTTATTTCCTTTTTGGTGTGCACACTAGGTGTTTGCTAGAATGTCTGAAAGAGTTTGTGTATACATGGTTGGCTCAACATTATGTGTTAGTCATATTTTATATCGTTGCTGACCTATCACATAGTGCAGGAGTAAATTTTTTGCTATCTTTATTGTTATTACTTGCTGTTGATCTTCCTTTTCGTAAAGAACATTAGCCTTTTAGATAACGAAAAGAATATTATGTATCCTGCCAAAAGGTTTGATTTGGTGATCACTGGCTAGTACAAAAGTAACGAGAGATCAGAAAAAAAACAAAGTTTTGGTTACACTAGCTCATTACAATTTATTTGCTGAACATGTGAAAAATTAATAATTGTCGTACGTCATGTTGCTCTGGCAGTCTGGCTGCAGGTGGTTAGTTTTTTCATATCCATTGTCTTGGTCTACCTTTTCCTACTAAACTAGGACTAGGAGTAGAAAAAAGTAATTGTTGGTTCCAAGTTCAAAAGATAGGCAGATGTGAGCTATGGAACTTGCAGTTCTTGATCTCCTTCAGAGCTTCCTTCAGAGCTTCTCACCTCACATATATGGATCTCTGTTTATCCCAAAGCAACATTTTTTAACCTGCTAGTTTCAAATTGATCATCTTTGTTATTCTTCATTTATTCTATTTCTCTCCCTAAGGGAGTTTTCTAGGGTTGATATGTGGACAATCGAATGCAGCTATGCTGTTCAAACCACTGTCAAAAGATGCAGGACAGGATGGGCAGATGTTTATTCAGTGTTCTTGTTCAAATGAAACATATACTATTCTGGAAGAGGTTGGTTAACTTACATTGTATATAACCCTTACCTTGTTACTATCCTCTTGCAAAATGCATGGATTGGTGAAATCATGTTTTTTGTCATGCAGAATTGTTTTCTGAAGCTCAAAGTTGAAGCTGCAGTCTTCACTGTTTCTGGCAGAACCCAAATTGGTGGCTTGGTGCTGCATAACCTGCAGAGAACGCAACGGCCACTGCTTGTAGCCTTCAAGGATGCTACATTATTGATCATCTCACTACGGTCCCGATCAAACTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022717