BGIOSGA022752

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Revision as of 13:22, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022752| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022752, complete gene.| tag = B1435D0...")
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Gene Name

BGIOSGA022752

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022752, complete gene.

LocusTag

B1435D02.29

Ensembl Transcript ID

BGIOSGA022752-TA

Ensembl Protein ID

BGIOSGA022752-PA

Length

7025

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12272697..12279721

Sequence Coding Region

12272697..12273203,12273958..12274042,12274369..12274480,12275147..12275259,12276781..12276878
,12277043..12277119,12277848..12277922,12278814..12278876,12279577..12279721

Genome Context

<gbrowseImage1> name=IndicaChromosome06:12272697..12279721 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:12272697..12279721 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACCAACAGAGATAAGAAGAGGAGAAGAAAGGAGCATTCTGTTGAGCTGAAAGAGGGTGATCAAGTTAACATATCTAGGAAGGCAGTGAAGATAAAGGGAAACAAGAAGAGAAAAAATGAAAGCGATAAGTTTAATCCTGACTTAAGCACTGATGCACTCACTGGAGAAGATAAGGTTGGTGGAGATGGCAAAAATGATAAGAGAAAAAAGAAGAACGATACATCGACTAGAAGGAATGAGGTTGGTAGGGATGATAAGAATGATAAGAAAAAAAAGAAGAGCAAGGAAAGGAACGGTGGAAGAAAAGGCGAAAAAGAAAAAGCAGCCCAGTCAAAGGACAAGGTTAGGCGGGTGAGCTTTTCTGATGCTGTGGAGGTGTTTAGCATCAACGACGGTGAAGATGAAGATAATGGCAAGAGTGCTGAATCCGAAGTTGTGCATGGGAAACGTTTTACTCCAGAAGAAAACGCGACCCTTATGGAGGCCATCATGAGCTATATAGAGATGAAGCAATTGGGAGAGAATGGGCTAGAGATGATTCGAGCTTGTAGTAAACATCCAGAGCTTAAGGGTTGTTGGGCGGAGATTGGAAAATCATTACCTCACAGGCCATTGACAGCCATATACAAGAGAGCACGGATTTTACTCTATAGGAGTGATGAGCGTAAATGGACTCCGGAGGAGTATGAGAAGATTCGCCGGCATGTTGAAAAGAACGGCACTTCTTGGATATCATTAGCACAGGAACTTGGAAAGAGTGAGATCCATTTAAAGGACACTTGGAGAAGAATCAAACCTAAAAACTTGAAATCAGGCCAGTGGACACAGGACGAGTACCAAAACTTGTTTGATTTGGTGAACTTGGACTTGCGAGTGAAAGCTCATCAAGAGTATGATGCTGGTAATCGTAAGCTAAGAGACAACATTGCATGGGAGGCTATTAGTGATAAATTGACAACCCGAAATCACAAGAATTGCTGCCTTAAGTGGTACTACCAGTTAGCATCACCACTGGTTCAGAAAGGCATCTGGGCAGACACTGATGATTATCGATTGGTGGAAGCGCTTCAAAATGTTGATGCTGTTTGTGTTGAAGATATTGACTGGGATAACCTTCTTGATCACAGGTCTGGAGAGGTTTGCCGTCAACGATGGAACGAGATGGTCCGCTATTTAGGTGGCCACAAGGAGAAGCCCTTCATTGAACAAGTGGAAGTGTTGTCGAAGCGCTACTGCCCAGAAATGGTTGACTATAGGGAAGGGGAAGCGTAG</cdnaseq>

Protein Sequence

<aaseq>MTNRDKKRRRKEHSVELKEGDQVNISRKAVKIKGNKKRKNESDKFNPDLSTDALTGEDKVGGDGKNDKRKKKNDTSTRRNEVGRDDKNDKKKKKSKERNGGRKGEKEKAAQSKDKVRRVSFSDAVEVFSINDGEDEDNGKSAESEVVHGKRFTPEENATLMEAIMSYIEMKQLGENGLEMIRACSKHPELKGCWAEIGKSLPHRPLTAIYKRARILLYRSDERKWTPEEYEKIRRHVEKNGTSWISLAQELGKSEIHLKDTWRRIKPKNLKSGQWTQDEYQNLFDLVNLDLRVKAHQEYDAGNRKLRDNIAWEAISDKLTTRNHKNCCLKWYYQLASPLVQKGIWADTDDYRLVEALQNVDAVCVEDIDWDNLLDHRSGEVCRQRWNEMVRYLGGHKEKPFIEQVEVLSKRYCPEMVDYREGEA</aaseq>

Gene Sequence

<dnaseqindica>1..507#1262..1346#1673..1784#2451..2563#4085..4182#4347..4423#5152..5226#6118..6180#6881..7025#ATGACCAACAGAGATAAGAAGAGGAGAAGAAAGGAGCATTCTGTTGAGCTGAAAGAGGGTGATCAAGTTAACATATCTAGGAAGGCAGTGAAGATAAAGGGAAACAAGAAGAGAAAAAATGAAAGCGATAAGTTTAATCCTGACTTAAGCACTGATGCACTCACTGGAGAAGATAAGGTTGGTGGAGATGGCAAAAATGATAAGAGAAAAAAGAAGAACGATACATCGACTAGAAGGAATGAGGTTGGTAGGGATGATAAGAATGATAAGAAAAAAAAGAAGAGCAAGGAAAGGAACGGTGGAAGAAAAGGCGAAAAAGAAAAAGCAGCCCAGTCAAAGGACAAGGTTAGGCGGGTGAGCTTTTCTGATGCTGTGGAGGTGTTTAGCATCAACGACGGTGAAGATGAAGATAATGGCAAGAGTGCTGAATCCGAAGTTGTGCATGGGAAACGTTTTACTCCAGAAGAAAACGCGACCCTTATGGAGGCCATCATGAGCTATATAGAGGTTGCCTCTCCTTCGAATGCTTAGCATCTTTCCTCTTTACTTCAATACCTGAATATATGAAAATATATGAAACAGTGACAAGCACACTAAAGTTGAATGAGAACTATGCCTCTGACTGTATAAGACAAACCTGGCTGTTCTTTATGACTGATTTTTTCTTGTCTTTATTGCACTCAGATGATCTATTAATCATGTTTAACAAACATGCCAATCCTCTGTCATCAAATTTAAAACATATATTGATGAAAGCATGCACTTTAGCTGTGCAGTTCAACAATCCCTCCGTCCTAAAATATAGCTACTTAGGAAGCTTTTGGAGGGATTAAGGATTATGGTGCAAGGTCAAAACTGCCCATCATTATAGTAGGGCTAAGTAGTTGGTGTGATATAGATTGCTAGGGTACGATGGAAAAGTAAGCTAAAGAAATTTGAATTTCAAAGGTAGCTATATTTTGGGACGGAGGGAATATCAGAATCCATCTGTTGCATTGTTTATTAATTTTCCATTGCAATAATCTTTTTTTGGGGAAGTTAACAGAAATTTCATGATTTAGCTTGGACACCACTTTGTTGTTAGTAAACTTTTACGCTGTATCACTGGTTTTCAAATATGCTGGTGGTATTCTTTTGGTGTTTGGATTTCATCTCATGATTCTACTAGTCTTTTATTACTACTAAACTAAATGGTGCATGGAAACTCCATGCCTCGCAATATAAAGTTTAAACACATTACATGTTTTATTTTTCATTTTAGATGAAGCAATTGGGAGAGAATGGGCTAGAGATGATTCGAGCTTGTAGTAAACATCCAGAGCTTAAGGGTTGTTGGGCGGAGATTGGTAAGATGAGAACATCTTCTATATCTAACTCTTCACTTTTGTTTCCCTTATGTCTGCTTGTGTTTGTGTTTCCCTAATGTCATTATTCTTTTATCCCTGCAAAGAAAGTAAAATCTCCTTGTTGCCCCAATACTGAAATCTCTTTCATTGCATTGCAAAGTTCAATTTTCCAACAGAATATGCACTTTGCATATATTTTGGAATATCGGCACTGGGAACAGTGAAAAATTGCTTCCCGCTCATTCACTACATCATGTTCACTTTTCCCTTATCTACATGGCAGACAGCATATCATGTTACTCATTAATGCACGACATCCTTTGCAGGAAAATCATTACCTCACAGGCCATTGACAGCCATATACAAGAGAGCACGGATTTTACTCTATAGGAGTGATGAGCGTAAATGGACTCCGGAGGAGTATGAGAAGATTCGCCGGTAATATAAAGCCCTCCTATGGTTGAGCTAATGCAGATTTCTATTTCCTGCATATCGTATTTTCAAAACAATTCCATAGTCCATACTTGCTAATGTTTTGTACTTTCAGCTATACAGATCAAACTATTTTGAAAAGAGCTACACAAATCAAAACCTTTTTCATAAAATGGTGCACAAATCAATCATCTAGAAGCGTGAATATCAGTCCTCAAATATATCTTGAATGTTCTGTATGTGCTCAAGGATCCACAGAGTTAATTTGTAGAGCATCACCCAATTTTTGAAGTTAAATAAATTCAGATTCAATTTTTGAAGTTAAATAAATTCAGATTGCTTGTATGGTAATAACTTATGTAGCTTGCTCTATCCCCTTTTTTTAGTCTTTAAGGTAATGTTCACAACCATGAGTGAGGTCAAACTAAAACCTTTGTAACTTCATGTTGACGTTTTGCAATTTGCTTTGAACGGTTCGACTATATTTTTGACTGAGGTTGTTTCTGTTGGATTTTTCATATTTGTTCATATCATTTCACATCATCCTGCAAAGTGATTGATACATCAGTCTATCCAAAGCATAATTTATTGGCATTTTGTCTTCATAAAACCTAAATGTGAGCAGTATGTTTTTTGAAAGGCTTATTAAGATCAGTGTGTATTATGACACAGGCATGTTGAAAAGAACGGCACTTCTTGGATATCATTAGCACAGGAACTTGGAAAGAGTGAGATCCATTTAAAGGACACTTGGAGAAGAATCAAACCTAAAAACTTGAAATCAGGTACTGGTTGCTGCAATTCCGCTGTTTGAAGTTCAATATTTCTTTGCAATATGCTTGGCTTTTAACTTCTAAAAATGTTCACTTTCGGTATTAAAAAAAAATGTTCTTTTCTTTTGTGCATTCTTCCAGAATTCCTTTTCTCCCATTATACATAGCACTTTCTTGAATTGGTTATTATGCACGTAAAATGCTTGCGCTAACTGCAGGCTGACTCTGTACTGTAGTTAGTTTTTGTTTAGCTGTATAACATACATCAAATGTTGGACTTCGTGAGAAGAGGAAATCGGATATGAAACCTGTTGTCAAAACTTGTATCAGGAGTGCAGGCGTGGCAAACATGACTTGTACAGACCTCACAGTATTATATGTGCAGGCATAGCAGACACAACTAGGGTGGGCAAAAAAGACCAAAACCAAAAACCAAACCCGAAGTCACCTATGGTGCTTGGTCCATATATTTGTGCGGAAAGACTGGTTGTTTTTTAGGTTGTTTGGTTCTGTACGTCAGTACCCGAACTGCCTGAACCTCCACCAGTAGATGACGCCAACAGGCCCCAACTCCTCAAGGTCCCAGTTAGTTCTAGACACCATTCCCCATTCCATTTGCGTACTTCTCAACCCTAGCCGCCAGTCCAGCATGCCACCACCCCCAGGCGCATCGGATTGACAGATCAGGGATGCAGAGGCGAGGCGGCGACAGTGCAGGGGCAGAGGCTGCTCAGCTGGCGGGCTAAGGTGGTGAGGCATGGCCACCTGGGGGTGTTGCTGCCTGGGAGGTGTAGGTTGGGCAGCTGGCATCGACAGCCAACGAAAAGGGCTGGAGCAAGCTAGTTGTAGTGCCAGAGGCAAGCAGTGGATGCCCATTCCCTGGTTTCTCATATGTCAGTTTTTGTCATTTTGTGATTGGGACCTGTGATCTCTGACTTCTTTTTTGATATTTTGATTAGTTTATTTGTCTATTTAGCTCATAATTGTTGATTAAGAATCATTTCGAAGGCTGGCTTAATGACTTTGATATGCTCTGTGCTAAATTGATCAGATCGTGCAAGAACAAAGACTGGACTGATCGTTCGGTTACCCAAATTGTCGGTTCATGAATTTGTGTTGGCAGCATCGGTTTGTCCTTTCTGAAGACCTTTGAAAGGCCGAACTAACCGGACCGAATTTTCGGTCTAGACCGAATATCCACCCCTAGACACAACTTGTAACAAATCTGTCATATTTTGTTTTTCTAACTCTGAACATACTGGAAACTACATGCAAAAACTTCATAATACGGTGTTGATTACGAAATTGCATTTTCTACTTGAATTTCATTGTCAGTTGCGAGATTTTGCATTTCCATTAAATGGAAAGACAGTTTGCAGAGTAAGTTATGAAGGGTCCACTTGCGCTTCGCTATGCGAATGATGTTTGATGCCTCTTGTGCAATGAATGCAACACAATGCAATCATATAAAGTAAAATGTATACCATGGTTCATAACTTTTTACTGTTTGTGTGTTCATTGGTTATATTTCAGGCCAGTGGACACAGGACGAGTACCAAAACTTGTTTGATTTGGTGAACTTGGACTTGCGAGTGAAAGCTCATCAAGAGTATGATGCTGGTAATCGTAAGGTAAAATTTACTACTGTTTGACTGTTCGTTGGTGTATTCCAGGCCTGCTGTAATATTTTTACAACTTTTCATACTGTACGTTAGCTTGCATATTTGGCACTGTTCATTATTATTTCATCCCATCATTCCTTGTTATGAAGTAATTTACTTGCTTTTTGTGACAGCTAAGAGACAACATTGCATGGGAGGCTATTAGTGATAAATTGACAACCCGAAATCACAAGAATTGCTGCCTTAAGTGGTTAGTATTGAGCTACCTGCATTCCAGTACTTTATGTTTTCTTTTCCCAGCTGATTCCTGATCTGAGGTGCTGTGATCATATCATTATCTGTGCATCACATCAGATTTGTCTGGGCAATAATAATACCTAGAGTGTTTTTAAAATGAGAAATATATATCATGAGAAAAACATATATTTTTCTTCGCCTTAGGGGCATTTTAGTTATTTTAGGTCATAAAATTTGGTTGGCTTGGTATCTGTGCATGGTTAATACTTACAAGTGAAACCCCAAAACCAAGAGAGTAGTATACCTACGGTCTACGGTGCCTCCTTACATAGGGATCTACTTTTTCCTATTTTTTCTGGATCCTTTCCTGATTTTCGTACTCTTTCATATGCTGCTGGGAACTCATGCTTTCTATTGTCATTGGATCCATTGGTATATAGCCAGCAGGCTGCGGGCCAACCATTGCTGTTGCTTCTAATCTTCTGCTGTGGCTGTGCGCATTATTACATCACATTGATTGGCCTAGTTGTCAAAAGAGAGTGTTGCTCACAGGGGAAATTGTTGAGGTTTTATGGCAATGTGCATTTGACAGAACTTTAACTAATCGATCCCATCCTTTTTGTACAGCTAAACCTGCTCTATCTTGCATAAATCTTATGCTTCTAGATGAATTTGCTATCATCAGAGTAGGTTGTTTGCTTGTACTTGTACATGTCGAATTAATTCAATCCACACTTTCAGGTACTACCAGTTAGCATCACCACTGGTTCAGAAAGGCATCTGGGCAGACACTGATGATTATCGATTGGTGGAAGCGTAAGTTTGTACAGATTTTACCAAATTCATTGTTCTTTTCAAAATTTAATGCTGTCCTTTATACCCGAGAGTTCTAAAATAGTAGTTGTTTCAGTTTTAATCTGGTTTTTGTCGAAATGTCCTTAAGCTTATTGATGGTACGGTTTGCACTTATTTTTGTTGATATGGAAGTGTGCATGTATATAATACTACAAATATTAGAAGTACTATGGATTTTTCACAAATTTTAGAGTTTTTGCTTTGCCTATCCTGTTTGTGTTACCATGAGGTCACAAATTTGATGAAGAATTGGAAACTAGGCTTTGATTTCATTTTCCCTTTTTTAATTACTGGCACTAGGGCACCTTAAGTTGTCTACCTTTGGTTTTAAACAAACGCACCGCTGACATAGAACCCAAGTAATGACTGATGAGTGTCAACTAATGGCATGAGAATCAGAAAATTTTTCTCTATTATTTGAAGTTGTCTATATGCTACACTATAATTTCATAGGAATCAAGGGAAATCCTTATCCTCAATGGGCATACTGCACAAGATAGCACATGCCATGACATGCCATTTAATTTATTGTGAAAGCTAATTTACAATTTAGGCTTTGCATTCAATGGACCGATGGAGCACATCTTCTCTTTCTTCAGAAAGCAGAGTTGGTCAGAAAGCATACTACCTAAACAAAATTCGATTGATGAGATGTTGAAATAGTAGATTGCTGTATTAGACTCTGATTGCTGCGATTGTTAATTAGTTTAAATGTTATTGATTTTCTTGGACTTTATTGGATTGGATTAGATAGTGGATTGTGTTTTTTTTTTCAGTTTTAGGCCTCTTGTCTCCTCACGTTAAGTCTTGCTAGCATGAAATTTTATAACTAATCGCTGAATCTTCTTCCAGGCTTCAAAATGTTGATGCTGTTTGTGTTGAAGATATTGACTGGGATAACCTTCTTGATCACAGGTGAGTGCTCAAATATTTCTGATCTACCTTCAATCTTGTTTGTTCAGGGAAAAAAACTTCTTAGCCCCCTATAAAGTATTTGTTCTACGATTAATTTACCACCTCCTCCTTTAAAGTATGAAACCAGGTATTCAATCCCCTGAAGTATCAAACCCAGGTCAAATAATCTGCCCTACCCTGTATTTCAATGGAAACCTTGGGCTGCATGTCGCTACTGTTCATGCCTTTTTTTTTTCTCTACATTTGTATAATCGTATTAAGGAATTTAAGTTCACTATGGATGCACAATAGCATGTGCACTAGTTAAATGTGGGTTCTTTCATGCTGACCAGTTTGATTGCACCTGCTAGTCTTATAATGTGGAGACAGTAGTGCAGATCAACAAGGTTTATTTTTTTGGTAATGAATGCAGATATTAGAGGCTTAGAGTTTTCCCTATAGAGGTACTTGTTACCTATAGTGATCGAAGTTGCATTCGAGGTATAATATTTGACTTGGGACTTGAAGAGAACCATACATTTTGCACTGTTGAGCAATCTATCTTTTTTTTTCTTTTTGCTGAAAATATATGACGTTCTGTAGGCATTACCAAGAACCTATTTAAACCTTTTGAAATTGGCATGTATTTCCATGTGCGTTGAAGTTTGGTTCCATTTGGTTACAAATTTATAATAACGGAGTATTTCATTCACTCTACTAGGTCTGGAGAGGTTTGCCGTCAACGATGGAACGAGATGGTCCGCTATTTAGGTGGCCACAAGGAGAAGCCCTTCATTGAACAAGTGGAAGTGTTGTCGAAGCGCTACTGCCCAGAAATGGTTGACTATAGGGAAGGGGAAGCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022752