BGIOSGA022770

From RiceWiki
Revision as of 13:22, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022770| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022770, complete gene.| tag = OsI_226...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022770

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022770, complete gene.

LocusTag

OsI_22690

Ensembl Transcript ID

BGIOSGA022770-TA

Ensembl Protein ID

BGIOSGA022770-PA

Length

4749

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12472707..12477455

Sequence Coding Region

12472707..12473278,12473374..12473694,12474150..12474372,12474545..12474724,12474815..12475021
,12475586..12475663,12475749..12475819,12475909..12476019,12476441..12477455

Genome Context

<gbrowseImage1> name=IndicaChromosome06:12472707..12477455 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:12472707..12477455 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCTTCCTTCCGAAGGGCAAAACTACACAAACAGCATTTAAGTGGCCATGGAGAGGTGAATCGCAGCTATCGGCGCATCTTCTCATTGATATTCCACCTGAAATCGAATTGTCGGACTACCGAAGATTGCCAAGCCCTGGTAATGAGAGCCCATCAGGGCTACTTCATGGAGAAGATTTTAAGGAGGAGGTGATCCCTGACTTGGATATTTTCTTTGAGAGGCTCTATGAGTATTTCTGCGCGAAAGGTCTGCGGTGCATCATCACCAAGTGGATAATTGAGATACTCAATGTGACGTTTATGGTTTGCTGTATCGGGTTTTTCTTCTTATTTGTTGATTGGCCTGCCCTTGGCGATTTGAAATGTGGAGTGGAAGCGCTCGAGTCAGGGGCAAAACCTTGTGACCTAATGAAACTCATTAAGTATCATCCCCTAGATCCTTTCACATTTACAAAGTTTATCACTATTGGATCCATGGTTATACTCTCAACTTACGGAATCATTAACTTTGTGAAGTTTTTTGTAAAACTGAGAAGCACACTCAAGGTCCGTGACTTCTACTGTAACAGTCTCAAGGTTACAGATCTCGAAATTCAGACTATATCATGGCCTAGAGTAGTTGAGAAGGTCGTACTTCTGCAGAAGTCACAACGACTTTGTGTCGTTAAAGATCTCACGGAGCATGATATAATCATGCGAATAATGCGTAAACAAAACTACCTGATTGGGATGGTTAATAAAGGTATCATCGCATTGCCAATCCCCTCTTGGCTTCCTGGAGTTGGCCCAACTGTCAGCTCACGTATGCATGGAAAAAAAAGCTATCTGATGCTTCCAAAGGCCCTGGAGTGGACATTGAATTGGTGCATCTTCCAAACCATGTTTGATAGGAAATTTTGTGTTAGAAAAGACATTCTGACAAGTCCATCTTTATTGAAGAAACGGCTTGTATTTATGGGTATTGCCATGTTTCTTCTGTCACCTTGTCTTGTTATCTTCCCATTGGTATACCTATTTCTGAGATATGCAGAAGAATTCTACAATCACCCCAGTACGGCATCATCTCGAAAATGGTCGAATCTTTCAAAGTGGATTTTGAGGGAATACAATGAGGTTGACCATTTCTTCAAACATAGGTTGAACAACAGTAGTGTCAACTCACTAAATTATTTGAAGCAGTTTCCAACTCCACTAGTATCTATTATTGCAAAATTCATATCGTTTGTATCTGGTGGATTGGCTGGAATTCTTCTCATCCTTGGATTTCTAGGTGAATCCATCCTTGAGGGTCATGTATTTGGCCGAAATCTTCTCTGGTATACTATTGTTTTTGGAACAATAGCAACTGTTAGTCGGAATGTTGTGGTTGATGAACTCCAAGTGATTGATCCAGAAGGAGCTATGTCCTTTGTTCTGCAGCAGACACACTACATGCCTAAAAGGTGGCGCGGTAAAGAGGGCAGTGAACTTGTACGAAGGGACTTTGAATCTCTGTTTCAGTATACCATAACGATGCTACTAGAAGAGATGGCCTCAATTTTCATCACTCCATATCTGCTAATATTTGTGGTTCCAAAGCGTGTTGATGATATTCTACGCTTCATATCAGACTTCACAGTTTACGTTGATGGAGTGGGAGATGTGTGCAGCTTAAGCATGTTCGACTTAAGAAGACATGGAAATAGAAACTACGGTTCACCACATAATGCAGTTAAAAGCATGAGAAGCTCCCAAGGAAAAATGGAGAAATCACTATTAAGTTTCCAAAGCACCTACACATCATGGGAGCCAAACGCAGATGGCAAGAAATTTATTTGCAACCTCCAGAAATTCAAGGAGAAACAAATCCGTCAACATACCTTTCAAACAACGGAATCATCACAGCTTGGGTTGAGTAGTAGAGGTCAAACTGCAGTTTTCCATCGACTGCTCCCTAGAAACATCTATCCTGGCAATGGGGTCATTTTTAACTTTGATCCATTAGGACTGCTCGACACAGATCAAAGAGCTTGTCCATATATCCTGGATTGGTATTACACACACCAACACACAAATAGAGAAGCGGGCTCATCTTCCCACCTTAATGAAGCATCACCTGAGCAACAGGAGGAGATATGGCCACCTCTGAGCAAACCATTAACAGAAATTGAAGATGAGCAAATCTGGGATTCTGATTTATATAGAAGAGCTCGAAGCTACCTGGAGGCATCAACATCAAGTGCATTCTTTCGACAGGCCACCACCTTCAAGCGCCATGGCAGGGAACAAAATTCTACCAGCCATCAATGGTGGGCTCAGGCCTCGAGGCAGCAGGCTGATCCACGAAACAGTTTTCAAGGGCCTCCTCAAGACAGTTTTCTTGAACCTCCGGACTTCCGAAATCATTTGGAAGCTAGCCATGATTCCAGCCATCAAAGTGATTGTAGGCTGACCTCCAGATCAACTGATCCACAAGACAGCTTCGTTGAGCCTCCTGATTTTGGTGATTACATGTCCTGTCATAGCTCTAGCTATCATGGCGATGAAACGTCGGATGGAAACTCAGAACTAGATCAAAGCAACAATAGTTGGCGAAGCCCCCATGCCCTGTCAAAGACAAGGTACATGGGTGATGATGATCTTGACCTAGAACAAGGCCCGAGTTTCCATTTTACTGATGCCCCTCAGAAGGACAGTGGAAGTGAAGGAGATGGACATGGTGTAGCCAATATTTACAGCTCTACGCCAGCCAGCCTTCCTGTACGGATAATACCTAGAAGCAGTGACCCAGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MSFLPKGKTTQTAFKWPWRGESQLSAHLLIDIPPEIELSDYRRLPSPGNESPSGLLHGEDFKEEVIPDLDIFFERLYEYFCAKGLRCIITKWIIEILNVTFMVCCIGFFFLFVDWPALGDLKCGVEALESGAKPCDLMKLIKYHPLDPFTFTKFITIGSMVILSTYGIINFVKFFVKLRSTLKVRDFYCNSLKVTDLEIQTISWPRVVEKVVLLQKSQRLCVVKDLTEHDIIMRIMRKQNYLIGMVNKGIIALPIPSWLPGVGPTVSSRMHGKKSYLMLPKALEWTLNWCIFQTMFDRKFCVRKDILTSPSLLKKRLVFMGIAMFLLSPCLVIFPLVYLFLRYAEEFYNHPSTASSRKWSNLSKWILREYNEVDHFFKHRLNNSSVNSLNYLKQFPTPLVSIIAKFISFVSGGLAGILLILGFLGESILEGHVFGRNLLWYTIVFGTIATVSRNVVVDELQVIDPEGAMSFVLQQTHYMPKRWRGKEGSELVRRDFESLFQYTITMLLEEMASIFITPYLLIFVVPKRVDDILRFISDFTVYVDGVGDVCSLSMFDLRRHGNRNYGSPHNAVKSMRSSQGKMEKSLLSFQSTYTSWEPNADGKKFICNLQKFKEKQIRQHTFQTTESSQLGLSSRGQTAVFHRLLPRNIYPGNGVIFNFDPLGLLDTDQRACPYILDWYYTHQHTNREAGSSSHLNEASPEQQEEIWPPLSKPLTEIEDEQIWDSDLYRRARSYLEASTSSAFFRQATTFKRHGREQNSTSHQWWAQASRQQADPRNSFQGPPQDSFLEPPDFRNHLEASHDSSHQSDCRLTSRSTDPQDSFVEPPDFGDYMSCHSSSYHGDETSDGNSELDQSNNSWRSPHALSKTRYMGDDDLDLEQGPSFHFTDAPQKDSGSEGDGHGVANIYSSTPASLPVRIIPRSSDPV</aaseq>

Gene Sequence

<dnaseqindica>1..572#668..988#1444..1666#1839..2018#2109..2315#2880..2957#3043..3113#3203..3313#3735..4749#ATGTCCTTCCTTCCGAAGGGCAAAACTACACAAACAGCATTTAAGTGGCCATGGAGAGGTGAATCGCAGCTATCGGCGCATCTTCTCATTGATATTCCACCTGAAATCGAATTGTCGGACTACCGAAGATTGCCAAGCCCTGGTAATGAGAGCCCATCAGGGCTACTTCATGGAGAAGATTTTAAGGAGGAGGTGATCCCTGACTTGGATATTTTCTTTGAGAGGCTCTATGAGTATTTCTGCGCGAAAGGTCTGCGGTGCATCATCACCAAGTGGATAATTGAGATACTCAATGTGACGTTTATGGTTTGCTGTATCGGGTTTTTCTTCTTATTTGTTGATTGGCCTGCCCTTGGCGATTTGAAATGTGGAGTGGAAGCGCTCGAGTCAGGGGCAAAACCTTGTGACCTAATGAAACTCATTAAGTATCATCCCCTAGATCCTTTCACATTTACAAAGTTTATCACTATTGGATCCATGGTTATACTCTCAACTTACGGAATCATTAACTTTGTGAAGTTTTTTGTAAAACTGAGAAGCACACTCAAGGTCCGTGACTTCTACTGTAACAGGTAACATTCCATCTTCTTGTGTTGTACATGTTAGTAGCATTTGCTGATTAGAACAGGTGATTTATCTATATGCATCTATTGTATTTTTCCTGCAGTCTCAAGGTTACAGATCTCGAAATTCAGACTATATCATGGCCTAGAGTAGTTGAGAAGGTCGTACTTCTGCAGAAGTCACAACGACTTTGTGTCGTTAAAGATCTCACGGAGCATGATATAATCATGCGAATAATGCGTAAACAAAACTACCTGATTGGGATGGTTAATAAAGGTATCATCGCATTGCCAATCCCCTCTTGGCTTCCTGGAGTTGGCCCAACTGTCAGCTCACGTATGCATGGAAAAAAAAGCTATCTGATGCTTCCAAAGGCCCTGGAGTGGACATTGAATTGGTGCATCTTCCAAACCATGTTTGATAGGTATGTGCTGTGTGTCTGTCTCTGTTAGCCATAAGTAGCATATTGTTTTATTACCGTTGGTGTTTCACTTGTTCATCAAAGTTATTCAAGTATTTAAAATCAATTAATATAATCTACAGTTCCAAGGAACAGTTACGACCATAAATGGAGATACTATGGCATATCAAATTGACATTTAGTTGGATAACATTGAATTTTATGCCAAAACAGATCTACTGGATGTTGTAACCAATAAATTATTTTACAGTTAAAGAAGTCTGTGGTGCTTGTTGTAATTGTATTAGAAAGTTCATTGTAGAGAATCCAGTTCGTTATAACCTTGAAAGTTCATTGTAGAGAATCCAGTTCGTTATAACCTTGATTATCTTGGACTATGTAGTTATTAAATAGTTTCCATCTTTTTGGACTATGTACTATTCTTCTCTGTTCAAAACTCACATCCTGTTCTGCTGCAGGAAATTTTGTGTTAGAAAAGACATTCTGACAAGTCCATCTTTATTGAAGAAACGGCTTGTATTTATGGGTATTGCCATGTTTCTTCTGTCACCTTGTCTTGTTATCTTCCCATTGGTATACCTATTTCTGAGATATGCAGAAGAATTCTACAATCACCCCAGTACGGCATCATCTCGAAAATGGTCGAATCTTTCAAAGTGGATTTTGAGGGAATACAATGAGGTGACTTCTCAAACTAGTTTCTCTGTTGTGAATAGCATTGATAATTCTGAAATCTGAATAATCACGTGGCAAACCTTTCTATTTTTCCTTTTTGGACGTCTTTCAAGTTCTATAGATCAATATGTAGTAAACTTCCCATTTTACTAATGTAACTGCTGAAAACAATTTTCAGGTTGACCATTTCTTCAAACATAGGTTGAACAACAGTAGTGTCAACTCACTAAATTATTTGAAGCAGTTTCCAACTCCACTAGTATCTATTATTGCAAAATTCATATCGTTTGTATCTGGTGGATTGGCTGGAATTCTTCTCATCCTTGGATTTCTAGGTGAATCCATCCTTGAGGGTCATGTAAGTTGTTAATTTTGCATTCACATGCTTTTAGTGGCACATGAATACCATTTACCTTTCGCAAACTCATATCATTCATTATTTGTGAAGGTATTTGGCCGAAATCTTCTCTGGTATACTATTGTTTTTGGAACAATAGCAACTGTTAGTCGGAATGTTGTGGTTGATGAACTCCAAGTGATTGATCCAGAAGGAGCTATGTCCTTTGTTCTGCAGCAGACACACTACATGCCTAAAAGGTGGCGCGGTAAAGAGGGCAGTGAACTTGTACGAAGGGACTTTGAATCTCTGTTTCAGGTAATTTAGCCGTCAATTCTGTATATGATTCAAATGTTGAAATGGGCGATTTGATTGTGTCTAAGTGTTTGCTGTTCACAACAGTAGACAGCAACCAGTAGTAAGCGCGTTGTTTTATTTTCTGATTGCGGCTGATAAGGTCCTTTCAAAGTCTCTAAATTTTGTTGATTTTTAATTTTTGGGAGCATAATCAGTAATTATATGGAAATGAAATTCTGCTCACTAATTCTAATTTCGATATATAAACTAAAACTATATTATATTGCACTTTTTTTTCTCAAAAAGCTGTCGCTTTCAAGTTTCTTGTTCTTTCAATCTTTGTCAACTCAAGACATGTGATAGATATGTATTTTCTGTATGCTGCTAATTAGTACCTATTTAGATAGAAGCTATGACAGCCGGTTTATAGAAATCAGAATGTTGCCCAGCTATAATCTGCATTGGTGGTATTAAAAAGAAAATCTGCATTAGTGAATTTACATTCTATCTTATTTTGATTGTGTAGCTTTTCTATTCTTGTACAGTTTGTTTTTACAATTGATGCCCTGTAAATTGCAATTGCAGTATACCATAACGATGCTACTAGAAGAGATGGCCTCAATTTTCATCACTCCATATCTGCTAATATTTGTGGTTCCAAAGGTAATGTATTTTAAGTTTCTATACCAAAAAACACATGTGTTTCTAAATTATGTTCTAAAATGTTGAGTTTTTAACCATTTTGTAGCGTGTTGATGATATTCTACGCTTCATATCAGACTTCACAGTTTACGTTGATGGAGTGGGAGATGTGTGCAGGTTTGTTTGTTTGTTCTACAGTTGATTATAAATTATCAGTCTGTTACCTCAGCTGCATCTAATGACATTGCTGTTTGACATCTCAACAGCTTAAGCATGTTCGACTTAAGAAGACATGGAAATAGAAACTACGGTTCACCACATAATGCAGTTAAAAGCATGAGAAGCTCCCAAGGAAAAATGGAGAAATCACTATTAAGGTACCCATATTTAATTTTAAACATGTCTCTTATCATTTATATTTATCTGAAGCATATTAGCATTATTACTATAGTCCTTGTACTGTTGTGTGCTTACATGCTATGCACATCCTATCATGGGCCACTTTTCTAGCTTGCCTTTTCATACCCTTTGGTGTTAGGCTATTCCTTGACTAGAGAACTTGTAGTTAGTCATCTGCCCTTCAGTCCTTTTGAGTGTACTGGGAGCTCGCCTATTGTGTCACAAAATCCATCTTTCAAATGCCATGTTGAAATCATAGGAAGATGAATCAGGTTTTAATAATCTCATTGATATGACAACACCACAAACCCATATCAAATTCAACAGAAAGGCTCAGGAAAAATAGTATGTTTGGATGAAGATTGCCTTGGCCTAACTACGCTGTTTCATTTCTTACAGTTTCCAAAGCACCTACACATCATGGGAGCCAAACGCAGATGGCAAGAAATTTATTTGCAACCTCCAGAAATTCAAGGAGAAACAAATCCGTCAACATACCTTTCAAACAACGGAATCATCACAGCTTGGGTTGAGTAGTAGAGGTCAAACTGCAGTTTTCCATCGACTGCTCCCTAGAAACATCTATCCTGGCAATGGGGTCATTTTTAACTTTGATCCATTAGGACTGCTCGACACAGATCAAAGAGCTTGTCCATATATCCTGGATTGGTATTACACACACCAACACACAAATAGAGAAGCGGGCTCATCTTCCCACCTTAATGAAGCATCACCTGAGCAACAGGAGGAGATATGGCCACCTCTGAGCAAACCATTAACAGAAATTGAAGATGAGCAAATCTGGGATTCTGATTTATATAGAAGAGCTCGAAGCTACCTGGAGGCATCAACATCAAGTGCATTCTTTCGACAGGCCACCACCTTCAAGCGCCATGGCAGGGAACAAAATTCTACCAGCCATCAATGGTGGGCTCAGGCCTCGAGGCAGCAGGCTGATCCACGAAACAGTTTTCAAGGGCCTCCTCAAGACAGTTTTCTTGAACCTCCGGACTTCCGAAATCATTTGGAAGCTAGCCATGATTCCAGCCATCAAAGTGATTGTAGGCTGACCTCCAGATCAACTGATCCACAAGACAGCTTCGTTGAGCCTCCTGATTTTGGTGATTACATGTCCTGTCATAGCTCTAGCTATCATGGCGATGAAACGTCGGATGGAAACTCAGAACTAGATCAAAGCAACAATAGTTGGCGAAGCCCCCATGCCCTGTCAAAGACAAGGTACATGGGTGATGATGATCTTGACCTAGAACAAGGCCCGAGTTTCCATTTTACTGATGCCCCTCAGAAGGACAGTGGAAGTGAAGGAGATGGACATGGTGTAGCCAATATTTACAGCTCTACGCCAGCCAGCCTTCCTGTACGGATAATACCTAGAAGCAGTGACCCAGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022770