Os09g0348200

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0348200| Description = Conserved hypothetical protein| Version = NM_001069483.2 GI:297609299 GeneID:4346814| Length = 2519 bp| Definition ...")
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Gene Name

Os09g0348200

Description

Conserved hypothetical protein

Version

NM_001069483.2 GI:297609299 GeneID:4346814

Length

2519 bp

Definition

Oryza sativa Japonica Group Os09g0348200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11502574..11505092

Sequence Coding Region

11502574..11502643,11502735..11502981,11503034..11503297,11504192..11504655,11505028..11505092

Expression

GEO Profiles:Os09g0348200

Genome Context

<gbrowseImage1> name=NC_008402:11502574..11505092 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:11502574..11505092 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgtttctctttgctgtattggtgttagccaccacaacgcttcatggcgtcgtcggccaaaaagctggctttgtaagcatcgactgcggcctggagggcaccagcggctacaccgctgaagacaccggcatcgtctacgtctccgatggcccgtacgtcgacaccggcgagaaccaccggttgctgcccggggaagagggccaaagggagcgccgctacctgacggtccggagcttcccctccggcgtacggaactgctactcgctgcccaccgtcgccggggccaagtacctcgtccgtgtggcgtcctattcgacctgcacctcggggcgacctactggccgggacaccgtgagcaactccagctactggttccgcgaggcgatgttcgtggcgtgggcgagctgggtgccggtgtgcctggtgaacaccggccgcggcacgccgttcgtgtccgcggtggagctgaggccgctcggcggcgagctctacccggctctcaatgccatccagagccagtccatgcgcttggttcaacgaactaacatgggcccatcaaaatcacgtattttacggtaccctgatgacccatatgaccgacgctggttgcggatgcagcttgatcggacatggaagaacctttccactgcgtcgaccatcaaggatacgagtttggactacgctgtgcccttgcctgttatgcagactgccgctgaggcggtcagcaatgagacgtcgctcgccattacaggggaatacaaagcaccaatgggtcagcttgaagtgttcatgcactttgcagacttccagaacagccagatccggcagttcagcatctccttcaacaagaaagcgtcagtccagatgaggccatcgtacctagccaccgataccctccacagtacatacaaggccaccggtggcgtgtgcacaatgactcttacgtctacctccgagtccactcttcggccgatgctcaacgcgtttgaggtttacagtgtgatcccccgtgacaatccgatgacattccctagagactgcctcagctaccgtatcttcatctcccccgaggccaggggcggacttaggcctcgggccacctag</cdnaseq>

Protein Sequence

<aaseq>MAPFLFAVLVLATTTLHGVVGQKAGFVSIDCGLEGTSGYTAEDT GIVYVSDGPYVDTGENHRLLPGEEGQRERRYLTVRSFPSGVRNCYSLPTVAGAKYLVR VASYSTCTSGRPTGRDTVSNSSYWFREAMFVAWASWVPVCLVNTGRGTPFVSAVELRP LGGELYPALNAIQSQSMRLVQRTNMGPSKSRILRYPDDPYDRRWLRMQLDRTWKNLST ASTIKDTSLDYAVPLPVMQTAAEAVSNETSLAITGEYKAPMGQLEVFMHFADFQNSQI RQFSISFNKKASVQMRPSYLATDTLHSTYKATGGVCTMTLTSTSESTLRPMLNAFEVY SVIPRDNPMTFPRDCLSYRIFISPEARGGLRPRAT</aaseq>

Gene Sequence

<dnaseqindica>1..70#162..408#461..724#1619..2082#2455..2519#atggcgccgtttctctttgctgtattggtgttagccaccacaacgcttcatggcgtcgtcggccaaaaaggttttttctctcttttccactactatctctgagactgcaggggataatcacatgttcagaaactcatcagattcattgttcatgtgtgcagctggctttgtaagcatcgactgcggcctggagggcaccagcggctacaccgctgaagacaccggcatcgtctacgtctccgatggcccgtacgtcgacaccggcgagaaccaccggttgctgcccggggaagagggccaaagggagcgccgctacctgacggtccggagcttcccctccggcgtacggaactgctactcgctgcccaccgtcgccggggccaagtacctcgtccgtgtggcgtcctagtacggcaactacgacggcaaggacgacagcttgttgtcgtcgacgtcgcagttcgacctgcacctcggggcgacctactggccgggacaccgtgagcaactccagctactggttccgcgaggcgatgttcgtggcgtgggcgagctgggtgccggtgtgcctggtgaacaccggccgcggcacgccgttcgtgtccgcggtggagctgaggccgctcggcggcgagctctacccggctctcaatgccatccagagccagtccatgcgcttggttcaacgaactaacatgggcccatcaaaatcacgtattttacggtatgtatgtaaaaaagaaagatctatcctacatgttagtctttgtgaatggacgccatcttttccggccggccagtttgggttttaatgtggttggttttccttttcgagactgctacacgtatacgtactaaatttttcttactagctaaattttttactaacaatcatctcaaccgtatgatttaggtagatagaagttataaaatacctagatacattcatagcatgtcatgtaaatgttagtaagaaaaaaatagtatttataacattttccttttcgtttgagcatagaacctaaatccattttcatagacatttacttttatgatgaatttaattcaaaacctttagtttcatgataaatacaatctaaatttatacgtttattttaaggagcatctgttattagtggatcacttctgttatcccttggatgacaattcaatggttctcatcaatccatattagtctcttcttttagattatgaatctataaaaatttccatacttgaaacaaacttacaatcataataatttacaaagctatatgtaggagtagataacaatgaaatattgcagttaaaatgaacttagcaacgtgcaacttttggtgactgtattttaaattttcaggcctataaaatctagtgaatactgtaggttttttactactccactcattccaaaatataaaaatactaggattggatgagatatttcatagttatacaaatttggataggctccatgtccagattcgtagttctatgacatgttcaatctggtctaggttcttatattttagaacggaggtagtataatggtctatcaaattatatctagtttgacaaaatttactttttcttaacactttgggataaccatatataggtaccctgatgacccatatgaccgacgctggttgcggatgcagcttgatcggacatggaagaacctttccactgcgtcgaccatcaaggatacgagtttggactacgctgtgcccttgcctgttatgcagactgccgctgaggcggtcagcaatgagacgtcgctcgccattacaggggaatacaaagcaccaatgggtcagcttgaagtgttcatgcactttgcagacttccagaacagccagatccggcagttcagcatctccttcaacaagaaagcgtcagtccagatgaggccatcgtacctagccaccgataccctccacagtacatacaaggccaccggtggcgtgtgcacaatgactcttacgtctacctccgagtccactcttcggccgatgctcaacgcgtttgaggtttacagtgtgatcccccgtgacaatccgatgacattccctagagactgtaagcatcccctttctcattacaaaaggagtataaattacccactaaacatatgcagtagtatttatccccctcaatttaaatacgtactatataaacatttcacaactcaaacttttcaaatcagacgaattacaccctgactcaatctatagcggttttggtcctacatggcaatctaagtcaccaaaaatatttttaaaatagtggggcccacatatcagcgtttctcccttcttcccctcttccttgggctcgacaacggtaggcgatgctggttattgctgtgaggtgagccttgcatgctgctgccccttttactctctttgtctctctacctcattgcgaggtgggccaatgatgttggggcaggcctcagctaccgtatcttcatctcccccgaggccaggggcggacttaggcctcgggccacctag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0348200, RefSeq:Os09g0348200