BGIOSGA022786

From RiceWiki
Revision as of 13:23, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022786| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022786, complete gene.| tag = B1156C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022786

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022786, complete gene.

LocusTag

B1156C07.28

Ensembl Transcript ID

BGIOSGA022786-TA

Ensembl Protein ID

BGIOSGA022786-PA

Length

2503

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12986145..12988647

Sequence Coding Region

12986145..12986942,12988435..12988502,12988599..12988647

Genome Context

<gbrowseImage1> name=IndicaChromosome06:12986145..12988647 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:12986145..12988647 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTGCTGCAGCGCGGTGCTGAGCGCGGCGGCGGCGGCGGCCGCGGCAAGCCGCACGCCGCCGTGGCTGCACCGCCTCCACGCCAAAGGGGGCCTGTCTTTCCCCTCCAACCTCCACATCGACGACCTCCTCTACGGCCAGCACCACGCCCTACCCCATCCTCCGCCGCCGCCGCCGCCGCCGCAGCCTGCGAAGGAGCCACCGCCGCCTACCAAGCCGAAGCATCCCAAGCCCAAGCAGCAGCAGCATCCACCGCCGCCGCCGCCGCAGAAGCCACCGCAAGGTAGCACCAATCTCTCCCTACCAAACCCTAGCGGAAGCGGAAGCGGCAACGGCAACCCACCACCGTCGCCACAGCTGCAGCTCTCCACCGTCATCGCCGACGTCTTCGTCACCCCCTCCTCCGCTCCTCCGCTCATCGCGCCGATCAAGGCCTTCCGCAAGCAGAACCACCCGCGCCCTAGGCCCGACAAGGCCTCCCGCCCCAGCAAGGAGAACAAGGACAAGGCCTCCAAGGTCAAGGTCAAGAAGCGCCGCCGCTCCGACCGCGCCGCCGATGGCGACGGCGAGAGGTGTAGCAGGACCGAGGTCACCGTCATCGACACCAGCACCGATGGGTGGAAGGCGGCGAAGCTGCTCCTCCGGAGAGGCGCCGTCTGGAAGGTGAGGGACAAGGCCTCCGGGGTCTCTGAACCTGAGGATCCCACCAAGATGAAGAGGAGGGCCGGCTTGGTCTCCAAGATTCAGAGGGACAGGGAGAAGCAGAAGCAGAAGGAGAAAGAAGCAACCTCATCGGGAAACATTCATGCTAGTAGTGGAGATGGGATGAAAGAGCCTGATGGTCCTATTCAAGCACTGAAAAGATCTAGAGGTCCTGAGCCAGAACCAGAAATTATAGCGCTTCTTCATTGA</cdnaseq>

Protein Sequence

<aaseq>MPCCSAVLSAAAAAAAASRTPPWLHRLHAKGGLSFPSNLHIDDLLYGQHHALPHPPPPPPPPQPAKEPPPPTKPKHPKPKQQQHPPPPPPQKPPQGSTNLSLPNPSGSGSGNGNPPPSPQLQLSTVIADVFVTPSSAPPLIAPIKAFRKQNHPRPRPDKASRPSKENKDKASKVKVKKRRRSDRAADGDGERCSRTEVTVIDTSTDGWKAAKLLLRRGAVWKVRDKASGVSEPEDPTKMKRRAGLVSKIQRDREKQKQKEKEATSSGNIHASSGDGMKEPDGPIQALKRSRGPEPEPEIIALLH</aaseq>

Gene Sequence

<dnaseqindica>1..798#2291..2358#2455..2503#ATGCCGTGCTGCAGCGCGGTGCTGAGCGCGGCGGCGGCGGCGGCCGCGGCAAGCCGCACGCCGCCGTGGCTGCACCGCCTCCACGCCAAAGGGGGCCTGTCTTTCCCCTCCAACCTCCACATCGACGACCTCCTCTACGGCCAGCACCACGCCCTACCCCATCCTCCGCCGCCGCCGCCGCCGCCGCAGCCTGCGAAGGAGCCACCGCCGCCTACCAAGCCGAAGCATCCCAAGCCCAAGCAGCAGCAGCATCCACCGCCGCCGCCGCCGCAGAAGCCACCGCAAGGTAGCACCAATCTCTCCCTACCAAACCCTAGCGGAAGCGGAAGCGGCAACGGCAACCCACCACCGTCGCCACAGCTGCAGCTCTCCACCGTCATCGCCGACGTCTTCGTCACCCCCTCCTCCGCTCCTCCGCTCATCGCGCCGATCAAGGCCTTCCGCAAGCAGAACCACCCGCGCCCTAGGCCCGACAAGGCCTCCCGCCCCAGCAAGGAGAACAAGGACAAGGCCTCCAAGGTCAAGGTCAAGAAGCGCCGCCGCTCCGACCGCGCCGCCGATGGCGACGGCGAGAGGTGTAGCAGGACCGAGGTCACCGTCATCGACACCAGCACCGATGGGTGGAAGGCGGCGAAGCTGCTCCTCCGGAGAGGCGCCGTCTGGAAGGTGAGGGACAAGGCCTCCGGGGTCTCTGAACCTGAGGATCCCACCAAGATGAAGAGGAGGGCCGGCTTGGTCTCCAAGATTCAGAGGGACAGGGAGAAGCAGAAGCAGAAGGAGAAAGAAGCAACCTCATCGGTGCGTGCTCTTTGTGCCCTGGCCTGCAGTTTTATGTCTCTACTGCTTAATATGCATGTTCTTGGATCACAAAATCTCACATCTAGCTATTTGATTCTTTGCTTGTGGAATGCTTGTTCTTTAACCGGAATGTAGCATATCATGTATCCCGTGATAACAGCTAATAAGTGCATAGATCACATTTGTTTTGTTTAAGTTCGCAAATTTTATTTTGTTCTTGCATGTATTCAGGAGTAGCTTTTGATTGACTTCTTGAACTAAATTATGATTCTATCGGAACGAAGAACGGTGAATTTGGTCAGTGCAGATTGGCATTGGATGTTTTGTTGCCATTGTGTGTGGTTGTGTTGCTATACACAACCAGGCACATTTAAGCCTGCACTCTGCATAAAAGTGCGTGTGTAGATAGAAATGGATTCCAGAAGTTCCTTTTTCTTGGGTTATGTGTTATATGTATGGAAAAAAAAACATATATTTTGTAGTGTGGTAAGTTATTATCCTACTTCCGCAGCCCTACCTGTGTTTCTTTGTGTTTTTGGTGTTGGAAATATACCAGTAATGCATGGTGCTTGCTGAGGAATGGAAAGAGGATTTCAAACTTGGATGATTTGAAGCACAATTATTTGCTATTTCTGATATTGGAATTAAGTAATATTCCTTGAATGGTTTGTCCATGCAAGAATAGGTCAGCTTGCATTACAGAGTCTAGTATCACTTATGTTGTTAGTTCAACTTGATCTTTTGGTTTCAGCATGAGCATGAACACAAATCACACGTGCACACTTGTGTAATCTAGTTTGCGGGTGCAGTACGCTGTAATTTCTAAGGGAATGTAGGAACAAGGGTATTTGCTGCATTGCTCTGTAGTTTCTAAGGGAAAGTAATTGTTTATTGTTATGTCCAAGGACGGAACGGAACATAATCGTTGCAGTTTTCACATGGGAATATTCACCCTCTGGTTGCAAAGGAGTGTCACTCTAAGTTAAACCTTTAAAGTTTGGTTGTCGTTAATATCAATGAATTTGCAATGAACATCTTTGTAGTTATTTGTGGTAAAATGTTCCTCTCTTTATAGAATAGTTAACACTGCACATGTAAAAGTGATATGTGTACATGTTCATCAGAAGCAATACTCCCACCATTTCAGAATGTAAGATGTATCAGTATCAGAATGTAATATATTTGTTCCAGTGATAGTCGAACTTGAAGAAGGTTGACTTAGGACAAAAACCAAAACATCTTCCATTCTGGAATGGAGGTAGTATTCATAATATCGGAAATCCATTATGTTTGATATGCATGATAATATAGATATTGGTAGTCCAGTATAAGTTATATAGATGGTGTCACTAGCTAGAATAATAATAGCATCATTGGAAGCATTTTAACTATAGCAACTTCAGGGGATGGAATGGTGGATAATGAATACAAGCTAGTGTGTATGCCTAGTATATTTTTCACTAATTCTTTGTATTATGTGTTTTTATTCTAGGGAAACATTCATGCTAGTAGTGGAGATGGGATGAAAGAGCCTGATGGTCCTATTCAAGCACTGAAAAGGTAAACGTTATTGCAGGCTTGCAGCCCAAAAGTGAAGTATCGATGTCTTTACTGAGGTGCTAAAGCTATTTTCTTTTACATGCATTAACATTGCAGATCTAGAGGTCCTGAGCCAGAACCAGAAATTATAGCGCTTCTTCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022786