BGIOSGA022800

From RiceWiki
Revision as of 13:23, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022800| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022800, complete gene.| tag = P0578B1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022800

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022800, complete gene.

LocusTag

P0578B12.4

Ensembl Transcript ID

BGIOSGA022800-TA

Ensembl Protein ID

BGIOSGA022800-PA

Length

1021

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13198708..13199728

Sequence Coding Region

13198708..13198889,13198990..13199092,13199177..13199465,13199577..13199728

Genome Context

<gbrowseImage1> name=IndicaChromosome06:13198708..13199728 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:13198708..13199728 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGAGCGGGCTGAGGAGCTGCAGCGCGGTGGGCGTGCCGAGCCTGCTGGCGCCGTCGTCGAACAGGAGCCGCCTGCCGGTCTGCGCCTACGCCACCACCTCCGGGCGCGTCACCATGTCCGCCGAGTGGATGCCGGGCCAGCCACGCCCCGCCCACCTCGACGGCTCCTCTCCCGGTGACTTCGGGTTCGACCCGCTGGGCCTCGCCACCGTGCCGGAGAATTTCGAGCGGTTCAAGGAGTCGGAGGTGTACCACTGCCGGTGGGCCATGCTCGCTGTGCCTGGGGTGTTGGTGCCGGAGGCGCTGGGGCTGGGCAACTGGGTGCAGGCGCAGGAGTGGGCGGCGGAGCCCGGCGGCCAGGCCACGTACCTCGGCAACCCGGTGCCATGGGGCACGCTGCCGACGATCCTGGTCATCGAGTTCGTCGCCATCGCCTTCGCCGAGCACCAGCGCACCATGGAGAAGGACCCCGAGAAGAAGAAGTACCCCGGCGGCGCCTTCGACCCCCTCGGCTTCTCCAAGGACCCCGTCAAGTTCGAGGAGTACAAGCTCAAGGAGATCAAGAACGGACGATTGGCCATGCTGGCTTTTGTGGCCTTCTGCGTCCAACAGTCGGCGTACCCGGGCACCGGCCCACTGGAGAACCTGGCCAGCCACCTCTCGGACCCGTGGCACAACAACATCGGCGACATCATCATCCCGAGAACCATCTACCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYATTSGRVTMSAEWMPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEWAAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVAFCVQQSAYPGTGPLENLASHLSDPWHNNIGDIIIPRTIYP</aaseq>

Gene Sequence

<dnaseqindica>1..182#283..385#470..758#870..1021#ATGGCGACGAGCGGGCTGAGGAGCTGCAGCGCGGTGGGCGTGCCGAGCCTGCTGGCGCCGTCGTCGAACAGGAGCCGCCTGCCGGTCTGCGCCTACGCCACCACCTCCGGGCGCGTCACCATGTCCGCCGAGTGGATGCCGGGCCAGCCACGCCCCGCCCACCTCGACGGCTCCTCTCCCGGGTAAGCACAAGCGTTCGACGACGACGACACGTCTTCGCCGGCGTGCGTCCGTGGCGAGCGAGAGACTGACAAAGCTAGGATTTGCCATGCGTGCGTGCAGTGACTTCGGGTTCGACCCGCTGGGCCTCGCCACCGTGCCGGAGAATTTCGAGCGGTTCAAGGAGTCGGAGGTGTACCACTGCCGGTGGGCCATGCTCGCTGTGGTATGGTTCTTGATTCTGATCTCCGCATGGCATGGCCTGCGCCGCCATGGACGAACTGAACTGAACTGAATCACGCTTGTGCAGCCTGGGGTGTTGGTGCCGGAGGCGCTGGGGCTGGGCAACTGGGTGCAGGCGCAGGAGTGGGCGGCGGAGCCCGGCGGCCAGGCCACGTACCTCGGCAACCCGGTGCCATGGGGCACGCTGCCGACGATCCTGGTCATCGAGTTCGTCGCCATCGCCTTCGCCGAGCACCAGCGCACCATGGAGAAGGACCCCGAGAAGAAGAAGTACCCCGGCGGCGCCTTCGACCCCCTCGGCTTCTCCAAGGACCCCGTCAAGTTCGAGGAGTACAAGCTCAAGGAGATCAAGAACGGTATGCAATGCACCCAACTTCTCTTTTTTTTTTTTAATAACGATAACGGTCGTCAAGTATTTAGAAACGGAGACGATAACATATGCGTATATATTATCGATCGGTTTGCAGGACGATTGGCCATGCTGGCTTTTGTGGCCTTCTGCGTCCAACAGTCGGCGTACCCGGGCACCGGCCCACTGGAGAACCTGGCCAGCCACCTCTCGGACCCGTGGCACAACAACATCGGCGACATCATCATCCCGAGAACCATCTACCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022800