BGIOSGA022804

From RiceWiki
Revision as of 13:23, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022804| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022804, complete gene.| tag = P0421H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022804

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022804, complete gene.

LocusTag

P0421H01.23

Ensembl Transcript ID

BGIOSGA022804-TA

Ensembl Protein ID

BGIOSGA022804-PA

Length

3273

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13359612..13362884

Sequence Coding Region

13359612..13359697,13359805..13359841,13360382..13360538,13360939..13361174,13361454..13362884

Genome Context

<gbrowseImage1> name=IndicaChromosome06:13359612..13362884 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:13359612..13362884 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGATGGTGCCCATCCATATGCTGATGTTGTTGGTGGCCACGGCGTTCTCTTGGTGGGGCACCCGCCGGAAGAACATCACCAGTTTGATATCTCTGGTATGGCGAGGTATTTCTAAAATGCCAATGGAAGATGTTGAATCTGTGGGATCATGCTCTCCATGCAATTCCATGATACGCAATGAGTCATTTGTGCACACTGAAGATCAGACCCAACATTTCCAGGGAAGCCCAGAACTGAAGACTTCAAGAGGAAAGATGACAATGGCACTACTTCTTGCTCTACTTGACGATGCAGTGAGCTATGTGTTGGCCAACTTTGCATTTTTTGGCGTCGCCGTGGGCCTGGTGGTGTTCCTCAGGCAGGTGCTCCACCAGGAGAACGCCGAGGCCGCCAATAGCGTCAGCATGTGGATGGGCACCGTCTACATCTTCTCCCTCTTCTGTGCTTTCCTGAGTGACTCCTATATGGGGCGCTACATCACTTGCATCATGTTCCAATTCATCTTCATCGTGGGGTTGATGCTCCTGTCGCTGTTGTCGTGGTTCTTGCTGGTGGAGCCGCCGGGGTGCGGCGACGGCGGCGGGCTCAGGCAGTGCGCGGCGCCGTCCCGGCGTGGCGTCGCGGTGTTCTACCTGTCCATCTACATGGCGGCGTTCGGGAACGGCGGGTACCAGCCGTCGGTGGCGACGTTCGGCGCCGACCAGTTCGACGACGCCGACCCCGGCGAGCGGCGGCGCAAGCAGGCCTTCTTCTGCCTCTTCTACCTCTCGCTCAACGTCGGCTCCCTCTTCTACAACTCCGTCCTGGTGTTCTTCGAGGACAGGGGCCGGTGGGTCGCCGGCTTCTGGGTCTCCACCGCCGCCGCCGCGCTCGCGCTCGCGCTCTTTCTCCTCGGCACGCCGCGCTACCGCCGGGTCCGACCTGCCGGCAACCCGCTCACCCGCATCGCCCAGGTGTTCGTCGCCGCGTACCGCAAGCGGCACATCGTGCCGCCGCCCGGCGACCACCTCCACGAGGTCGATGGCGAGGGCTCGGCGATCCGTGGCGTCGGCAAGCTCGCCCACAGCGACCAGCTCAGGTTTCTTGACAAGGCGGCGACGGCGACGGAGGAGGACTACCACGACGGGAACGCCAAGAACCCGTGGAGACTGTGCACGGTGACGCAGGTGGAGGAGGCCAAGTGCGTGGTGAGCATGGTGCCCATCTGGATCTGCAGCATCGTCTACTCCGTGGAGTTCACCCAGATGTCGTCCTTGTTCGTGGAGCAAGGCGCGGCCATGGACACCGACATCCTGGGCCTGTTCAACGCGCCGGCCGCGTCCATGTCGGTGTTCGACGTCGCCGGCGTGCTCGCCACGCTCGCCTTCTCCCACTACGTCCTGGTGCCCGCGGCGGCGAGGCTGACCAAGAACCCGCGCGGCGTCGGCGAGCTCAAGCGCATGGGCGCGGGCCTCGTGATCGCGCTGCTCGGCATGGTCGCCGCGGCGGTCGTCGAGGTCCACCGCCGCCGCCGATCCGGCGCCGGCGGCCGCGCCATGAGCGTGCTGTGGCAGGCGCCGCAGTACGCGGTGATGGGCGCGTCGGAGGTGTTCGTGTACGTGGGGCAGCTGGAGTTCTTCAACGTGCAGTCGCCGGAGGGGGTGAAGAGCCTGGGGAGCTCGCTGTGCATGGCGTCCATCTCGCTGGGGAACTACGCCAGCATGGTGATGTTGAGCGCCATCAGCGGCGTCACCTCGCGGCGGCGGACCGGCGGAGGGACGGCGGGGTGGATCCTGGCCGAGCTCGACCGCGGCCACCTCGACCGCTTCTTCATCACCCTCGCCGTGCTGTCCGCCGTGGACCTCGTCGTGTTCATCGTGTTCGCGCGGTTGTTCAAGGGCATCGAGCCGGAGGTGGAGGGGATCAGCTCCAGTCCACAGGATGACCACATATATATAGTCTAG</cdnaseq>

Protein Sequence

<aaseq>MKMVPIHMLMLLVATAFSWWGTRRKNITSLISLVWRGISKMPMEDVESVGSCSPCNSMIRNESFVHTEDQTQHFQGSPELKTSRGKMTMALLLALLDDAVSYVLANFAFFGVAVGLVVFLRQVLHQENAEAANSVSMWMGTVYIFSLFCAFLSDSYMGRYITCIMFQFIFIVGLMLLSLLSWFLLVEPPGCGDGGGLRQCAAPSRRGVAVFYLSIYMAAFGNGGYQPSVATFGADQFDDADPGERRRKQAFFCLFYLSLNVGSLFYNSVLVFFEDRGRWVAGFWVSTAAAALALALFLLGTPRYRRVRPAGNPLTRIAQVFVAAYRKRHIVPPPGDHLHEVDGEGSAIRGVGKLAHSDQLRFLDKAATATEEDYHDGNAKNPWRLCTVTQVEEAKCVVSMVPIWICSIVYSVEFTQMSSLFVEQGAAMDTDILGLFNAPAASMSVFDVAGVLATLAFSHYVLVPAAARLTKNPRGVGELKRMGAGLVIALLGMVAAAVVEVHRRRRSGAGGRAMSVLWQAPQYAVMGASEVFVYVGQLEFFNVQSPEGVKSLGSSLCMASISLGNYASMVMLSAISGVTSRRRTGGGTAGWILAELDRGHLDRFFITLAVLSAVDLVVFIVFARLFKGIEPEVEGISSSPQDDHIYIV</aaseq>

Gene Sequence

<dnaseqindica>1..86#194..230#771..927#1328..1563#1843..3273#ATGAAGATGGTGCCCATCCATATGCTGATGTTGTTGGTGGCCACGGCGTTCTCTTGGTGGGGCACCCGCCGGAAGAACATCACCAGGTCCATGGCAACGCTGAAGAAGGCGAACTAAATGTATATACCTAGCAAAGTTTAAAAATAAAATAAAAAAACATTTATAAATATGATTTGTGAAATTATGCAATTAGTTTGATATCTCTGGTATGGCGAGGTATTTCTAAAATGGTAAGAAGGCATATACCTCTTCAAGAAGAGGACAAAACCTAAAAACATCATATTCTTTTTATATTATACTCCCTCCTTCCTGTTTGACGCCGTTGACTTTTTTAAATATGTTTGACCGTTCGTCTTATTCAAAAACTTTTGTGAAATATATAAAACTATATGTATACATAAAAGTATATTTAACAATAAATCAAATGATAGGAAAAGAATTAATAATTACTTAAATTTTTTTAATAAGACAAACGGTCAAACATATTTTAAAAAGTCAACGGCGTCAAACATTTTAGAATGGAGGGAGTACCAATTAAGTACCTCCCCAAGATGATGTCCTTTAGATTGCTACTTGTTACGTTGAATATTATAATTGAATATGATAGGTAACACTTCAGAATCATTTGTTCTGTTTGTACTTATTATTTGTCGGCGAATTAATCAAACCAAGAATAAAAACTCTAAAATTTTTAGTCTATCCTTATTACTTTCTAGTAGAGTGGTAAGTGAGTTGTGACACCTTTTTCCTCAACTACTTTTTTTTAAAAGCCAATGGAAGATGTTGAATCTGTGGGATCATGCTCTCCATGCAATTCCATGATACGCAATGAGTCATTTGTGCACACTGAAGATCAGACCCAACATTTCCAGGGAAGCCCAGAACTGAAGACTTCAAGAGGAAAGATGACAATGGCACTACTTCTTGGTAGAAATTTAATCCCCACAATCTCATCCCAACTCTCTCTTTTTTTTCGTGGTTAATAGTGTTTGATTTACTAATAGTCCAGTATTTATACCAATATAATGTGGAGAACAATCTATCATTTTATACAATACTAGTCATAGGACCGTGCCTTGCAAACGGATGTGATATGGTGAATGTGGTTTAATTTTTTTTCTCTTCTCCCATATTTTTCTCTCAATTGGTTAGGTTTTTCTAGTGTTTCTTATGGATAGAATGGGAATAAGGATGACTGTGCTTTTAAGATATATAGTAGAGATAAACTAACCAGTGTTGAACAACACTGCAATGCAAAATGGGGGCATATATAGTGGTTTGATCCAAAAGAAATTAAAATATTTATTTTACCTCAGTGATTAAGCAGCTCTACTTGACGATGCAGTGAGCTATGTGTTGGCCAACTTTGCATTTTTTGGCGTCGCCGTGGGCCTGGTGGTGTTCCTCAGGCAGGTGCTCCACCAGGAGAACGCCGAGGCCGCCAATAGCGTCAGCATGTGGATGGGCACCGTCTACATCTTCTCCCTCTTCTGTGCTTTCCTGAGTGACTCCTATATGGGGCGCTACATCACTTGCATCATGTTCCAATTCATCTTCATCGTGGTATGTAATCCTTCTCTTGTCAAACAGGTGATATCCTGAAAAATATGCAGTCAGATATCAGGATAAACTCAGCAGTAGTATAAAATATAACAACATAAATACTGTGTCAACATTTTAAACAATCTTATTTATGTAAAAAGCAGAGCATATGTGCAATTTTGATTTCAGACGACTGAAAATAGCAAAACTGAATTATAAGTTTAAAGTTATTATAAGGTTAAGAGTGTCAGCAGTTGATGCATGAGACAAGTTTAATTTCTTGTGTGTTTTGGCATGCAGGGGTTGATGCTCCTGTCGCTGTTGTCGTGGTTCTTGCTGGTGGAGCCGCCGGGGTGCGGCGACGGCGGCGGGCTCAGGCAGTGCGCGGCGCCGTCCCGGCGTGGCGTCGCGGTGTTCTACCTGTCCATCTACATGGCGGCGTTCGGGAACGGCGGGTACCAGCCGTCGGTGGCGACGTTCGGCGCCGACCAGTTCGACGACGCCGACCCCGGCGAGCGGCGGCGCAAGCAGGCCTTCTTCTGCCTCTTCTACCTCTCGCTCAACGTCGGCTCCCTCTTCTACAACTCCGTCCTGGTGTTCTTCGAGGACAGGGGCCGGTGGGTCGCCGGCTTCTGGGTCTCCACCGCCGCCGCCGCGCTCGCGCTCGCGCTCTTTCTCCTCGGCACGCCGCGCTACCGCCGGGTCCGACCTGCCGGCAACCCGCTCACCCGCATCGCCCAGGTGTTCGTCGCCGCGTACCGCAAGCGGCACATCGTGCCGCCGCCCGGCGACCACCTCCACGAGGTCGATGGCGAGGGCTCGGCGATCCGTGGCGTCGGCAAGCTCGCCCACAGCGACCAGCTCAGGTTTCTTGACAAGGCGGCGACGGCGACGGAGGAGGACTACCACGACGGGAACGCCAAGAACCCGTGGAGACTGTGCACGGTGACGCAGGTGGAGGAGGCCAAGTGCGTGGTGAGCATGGTGCCCATCTGGATCTGCAGCATCGTCTACTCCGTGGAGTTCACCCAGATGTCGTCCTTGTTCGTGGAGCAAGGCGCGGCCATGGACACCGACATCCTGGGCCTGTTCAACGCGCCGGCCGCGTCCATGTCGGTGTTCGACGTCGCCGGCGTGCTCGCCACGCTCGCCTTCTCCCACTACGTCCTGGTGCCCGCGGCGGCGAGGCTGACCAAGAACCCGCGCGGCGTCGGCGAGCTCAAGCGCATGGGCGCGGGCCTCGTGATCGCGCTGCTCGGCATGGTCGCCGCGGCGGTCGTCGAGGTCCACCGCCGCCGCCGATCCGGCGCCGGCGGCCGCGCCATGAGCGTGCTGTGGCAGGCGCCGCAGTACGCGGTGATGGGCGCGTCGGAGGTGTTCGTGTACGTGGGGCAGCTGGAGTTCTTCAACGTGCAGTCGCCGGAGGGGGTGAAGAGCCTGGGGAGCTCGCTGTGCATGGCGTCCATCTCGCTGGGGAACTACGCCAGCATGGTGATGTTGAGCGCCATCAGCGGCGTCACCTCGCGGCGGCGGACCGGCGGAGGGACGGCGGGGTGGATCCTGGCCGAGCTCGACCGCGGCCACCTCGACCGCTTCTTCATCACCCTCGCCGTGCTGTCCGCCGTGGACCTCGTCGTGTTCATCGTGTTCGCGCGGTTGTTCAAGGGCATCGAGCCGGAGGTGGAGGGGATCAGCTCCAGTCCACAGGATGACCACATATATATAGTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022804