BGIOSGA022810

From RiceWiki
Revision as of 13:23, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022810| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022810, complete gene.| tag = OS06G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022810

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022810, complete gene.

LocusTag

OS06G0326400

Ensembl Transcript ID

BGIOSGA022810-TA

Ensembl Protein ID

BGIOSGA022810-PA

Length

5375

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13505665..13511039

Sequence Coding Region

13505665..13505769,13506506..13506678,13507029..13507141,13507523..13507711,13507795..13507862
,13507999..13508082,13508189..13508242,13508843..13508923,13509013..13509106
,13509228..13509301,13509374..13509484,13509570..13509614,13509697..13509753
,13509856..13509960,13510054..13510170,13510298..13510401,13510627..13510792
,13510911..13511039

Genome Context

<gbrowseImage1> name=IndicaChromosome06:13505665..13511039 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:13505665..13511039 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCAGCGTGGCGATGGACTCCGACTACGGCGTGCCGCGCGAGCTGTCGGCGCTGCAGAAGGCCCGCGCGCTCTACCGCCCCGACCTCCCGCCCTGCCTCCAGGGCACCACGGTGAAGGTGGAGTACGGCGACGCGGCTATCGCGGCCGACGTGGCGGGCGCTCATGTCATCAGCCACGCCTTCCCGCACACCTACGGCCAGCCGCTGGCGCATTTCCTCAGGAAGACTGCTGCTGTGCCGGATGCTACCGTCATAACAGAGCACCCTCTTGTCAGGGTTGGTGTTGTCTTCAGTGGGAGGCAGTCCCCAGGTGGGCACAATGTTATATGGGGACTCCATGATGCTATAAAGGCTCACAACGCAAACAGCAAGCTCATTGGTTTCCTTGGAGGAACTGATGGATTGTTTGCACAGAAAACTTTGGAGATCTCCGATGAGGTCCTTTCCTCTTATAAAAATCAAGGTGGTTATGATTTGCTTGGACGGACAAGGGATCAGATCAGAACAACTGAACAAGTGAATGCTGCAATGACTGCTTGCCAAGCCTTGAAGTTGGATGCTCTTGTAATAATTGGAGGTGTTACATCCAACACGGATGCTGCTCAGCTTGCTGAGACTTTTGCTGAGTCAAAGTGTTCAACAAAGGTAGTTGGTGTTCCTGTAACTCTGAATGGGGACCTTAAGAACCAGTTTGTTGAGACAACTGTTGGTTTTGATACCATATGTAAGGTTAATTCGCAGCTCATAAGCAATGTCTGCACTGATGCTCTTTCTGCTGAGAAGTATTACTACTTTGTTCGGCTGATGGGACGGAAAGCATCTCATGTGGCTTTGGAATGTGCTCTTCAATCGCATCCAAATATGGTTATACTAGGTGAGGAGGTTGCTGCATCAAAACTTACAATTTTTGATATCACGAAGCAGATATGTGACGCAGTCCAGGCAAGGGCTGAAAAGGACAAAAATCATGGTGTTGTACTTATTCCTGAGGGACTTGTTGAAAGTATCCCTGAATTATATGCTTTGCTTCAGGAAATTCATGGGCTACATGATAAAGGTGTTTCTGTTGAGAACATATCTTCTCATCTTTCGCCTTGGGCTTCAGCTCTATTTGAATTTTTGCCTCCATTTATTAGGAAACAGCTACTTCTTCATCCTGAATCCGATGACTCCGCTCAACTTTCTCAGATTGAGACTGAGAAACTTCTAGCCCAATTAGTTGAAGCAGAAATGAACAAACGTCTGAAGGAAGGCACTTACAAAGGAAAGAAGTTCAATGCAATTTGTCACTTCTTTGGCTACCAAGCCAGAGGTGCCCTACCCTCAAAGTTCGACTGTGATTATGCTTATGTTCTTGGGCATGTATGCTATCACATCTTAGCTGCTGGCTTAAATGGCTACATGGCCACTGTGACAAATCTTAGGAGTCCTGTGAACAAGTGGAAATGCGGTGCTGCTCCTATTACTTCCATGATGACCGTAAAGCGATGGTCACGAGGACCAGCTGCCAGTCAAATTGGGAAGCCTGCTGTTCACATGGCGAGTATCGACTTAAAAGGAAAACCATATGAGTTGTTGAGACAAAACTCTTCCAGCTTCTTGATGGAAGACATCTACAGAAACCCTGGTCCTCTGCAATTTGAGGGACCAGGTGGAGAGACAAAGCCGATTTCATTGTGTGTCGAAGATCGAGACTACATGGGGAGGATCAAACAATTGCAGGAGTATTTGGAGAAGGTCAAAAGTATTGTGAAGCCTGGATGCTCCCAGGATGTCCTGAAGGCAGCGTTAAGCGCCATGGCCTCTGTGACAGAGATGCTAACCATCATGTCTTCTCCCTCTTTCAGTGGCCAAGCAACCATCTGA</cdnaseq>

Protein Sequence

<aaseq>MGSVAMDSDYGVPRELSALQKARALYRPDLPPCLQGTTVKVEYGDAAIAADVAGAHVISHAFPHTYGQPLAHFLRKTAAVPDATVITEHPLVRVGVVFSGRQSPGGHNVIWGLHDAIKAHNANSKLIGFLGGTDGLFAQKTLEISDEVLSSYKNQGGYDLLGRTRDQIRTTEQVNAAMTACQALKLDALVIIGGVTSNTDAAQLAETFAESKCSTKVVGVPVTLNGDLKNQFVETTVGFDTICKVNSQLISNVCTDALSAEKYYYFVRLMGRKASHVALECALQSHPNMVILGEEVAASKLTIFDITKQICDAVQARAEKDKNHGVVLIPEGLVESIPELYALLQEIHGLHDKGVSVENISSHLSPWASALFEFLPPFIRKQLLLHPESDDSAQLSQIETEKLLAQLVEAEMNKRLKEGTYKGKKFNAICHFFGYQARGALPSKFDCDYAYVLGHVCYHILAAGLNGYMATVTNLRSPVNKWKCGAAPITSMMTVKRWSRGPAASQIGKPAVHMASIDLKGKPYELLRQNSSSFLMEDIYRNPGPLQFEGPGGETKPISLCVEDRDYMGRIKQLQEYLEKVKSIVKPGCSQDVLKAALSAMASVTEMLTIMSSPSFSGQATI</aaseq>

Gene Sequence

<dnaseqindica>1..105#842..1014#1365..1477#1859..2047#2131..2198#2335..2418#2525..2578#3179..3259#3349..3442#3564..3637#3710..3820#3906..3950#4033..4089#4192..4296#4390..4506#4634..4737#4963..5128#5247..5375#ATGGGCAGCGTGGCGATGGACTCCGACTACGGCGTGCCGCGCGAGCTGTCGGCGCTGCAGAAGGCCCGCGCGCTCTACCGCCCCGACCTCCCGCCCTGCCTCCAGGTAACGTGCCCTAGCTACCCTAAACCCACGGCCGCCGCCGCCGTGACGACATTGCCCTCGATCACCGACCATGCTGTTCTCGTCCGTCTCTCCCCTCCGGCCGGCCAGATCCATCCCGTCGACGGAGGAAGCGGCGGAAGCCACTAGGTTGCTAACCTAACTATGGTACAGTGCGGTTTCGAGCAATTTCGCCTAGCGCTTTCGGATGGTTGGATGGATGGGTGGAGGTGGGGTAGGATTGGGGTTAGGTGTACCAGTAACTAATGCGCCGATGCCGATGCCACCGTCGCTCTCCATCACTTCGGGAGGGAGGAGCCAGGAGGAAGGTGTGGAATCTCATCTCTGGGATTCCCACGGCCAAGCCTGCGACACAGGGCACACTGGGGATAATTGGAGCAAAATTCGGCATCTCCTTTAAATTTTTCCCCTCTCGACTGTTGCGTTGTCATCCTCCGGCCACGTAAGTGGCAGGGGATCGCGACGAGGCCAAGCGAAAACGACGGCACATTGGCACGCAGCTAATCACCCGATTCTGTTAGTCTTATCTTTTTTTTTTTTGGCTATTATTAGCTTTGCATTTGGGCGCTGCACTGTGGCAACGGATAAGCGCAATCTGTGAGAATACGTATTGCTGTGGTGTGCATGGCTAGAATGGTCGAGCGGGTCGTGTTCTTCATTGACAAAATTAACTCTTGATGATGATTGGACTGTTTATTGTCTGTGTGGGGGACAACAGGGCACCACGGTGAAGGTGGAGTACGGCGACGCGGCTATCGCGGCCGACGTGGCGGGCGCTCATGTCATCAGCCACGCCTTCCCGCACACCTACGGCCAGCCGCTGGCGCATTTCCTCAGGAAGACTGCTGCTGTGCCGGATGCTACCGTCATAACAGAGCACCCTCTTGTCAGGTATGCTCACTTCCTCTGTTCAGTGTGGTCCTGGTAGTTGTGCAGTTGAGCTATGATGTAGTAGCATGTAGTAGTAACAAACAAAGGTAAACACTAGTTCTACATGTTCCGGGCTTCCAATATTAATATTTTAACTTTTTTTTGCTGATTATTTAAGATGTATTCTTCCTTTACTAATTATTGAGTTAGTCATTCATGATTAGGAAAAAAATAATTACATGCCTATATGAGATGCACACAGTGGTGTAATCATGTCATGTCTGCTTATTTTTTCCTGCTATGTTTTGGAACAGTAACGTTGACTCTTACAAGTCTGTACAGCTTTAATTTAAAATCTGTGAATGATGCAGGGTTGGTGTTGTCTTCAGTGGGAGGCAGTCCCCAGGTGGGCACAATGTTATATGGGGACTCCATGATGCTATAAAGGCTCACAACGCAAACAGCAAGCTCATTGGTTTCCTTGGTCAGTGCATATGTTTATTGATGAAACTAATATGATTTAATTCAATTAATATTTGTATTTTGTGTTGTTTCTTTCTTTTTTTTATTGTGATAATCATTGTGTCATAAAGCTTCCATTATCTAAAAATCATTGTGTCATTTTATAAGGAGTTCGACAGTTTTTTAACGTTTCTAAATATATTATACTTCGATCTGATTATTGTCTAGAAAACGAATATGATTTTAGGATCAGTAATCAGCACTGAGCTTAGTGTGTACTAAATCCTCAAAATGTCTGCCCTGACACTTACATGTTCAAAATTGATATTCATGGTAGATTATCTAAAACAGAGTGAATTTGTATATGCTTTATTACCAATTTATTGTTTTTGTACTGTAACAGGAGGAACTGATGGATTGTTTGCACAGAAAACTTTGGAGATCTCCGATGAGGTCCTTTCCTCTTATAAAAATCAAGGTGGTTATGATTTGCTTGGACGGACAAGGGATCAGATCAGAACAACTGAACAAGTGAATGCTGCAATGACTGCTTGCCAAGCCTTGAAGTTGGATGCTCTTGTAATAATTGGAGGTAGTATCCCTTATGCCAATATGCTGAATTTTACCTATCTTATTCATTTGAATGACCTGACAATATCGTTTTCTTTTCTTAAGGTGTTACATCCAACACGGATGCTGCTCAGCTTGCTGAGACTTTTGCTGAGTCAAAGTGTTCAACAAAGGTTAGCAGATATTTGGTATTTTGTCTATATTAGCTAGCTTCTTGACTCTCGATTCCTTAAGTTTCACTGTGTACTGTGTTAACAAGCATTTTCCCTATGCCACATAAATAACCTGACACATGTATTTCCTTAACAGGTAGTTGGTGTTCCTGTAACTCTGAATGGGGACCTTAAGAACCAGTTTGTTGAGACAACTGTTGGTTTTGATACCATATGTAAGGTATATATGTGCAAAGATCAAAGAGTTTAACGATATGCTAGCATTTTGTGTTATATCATTTCATTACGATTTGTGATGGTTACTTGAACTTTTTTCTTTTCTATAGGTTAATTCGCAGCTCATAAGCAATGTCTGCACTGATGCTCTTTCTGCTGAGAAGGTAAATCAGAACAGATTTTCAGATGCCATATTAACAGTTTAACATTATTTCTTGGTTGTGTATAAATTCTTGATGAAATAGGGAAATTGCTGTAATTTTTTTATTTTCTTGACATTTCTAAATACTACTAAGTACCAACCCGGTAACCCCAAAAAACATATGGCATATCAAAATGATGTAATGCGTAAAAAATGTAACCGTAAAAACCTATTGGTTCTTTTTAGATAATACAAATAAGGGGCTAGAAATAAACCTACAGCCCATATTGATAGAATTGAAAATTAATGGCTGGTTTTTCCATTAAGCAACTCTGGATCCAGACTGCAATTTATCAACTGATCAGGATTATTTGCGCTCCACCTTGGGAAACCTTTTTTTATCCAACTTGGTCCATCTTGGGAAATCTATTATCTGAGCTTCCAATATATGACCCTTACAAGTAGTATCCAAATTGCAAAGTTCCTCTATATTTATATTTTTTTATATTTTATGCCATTAGAGATTTGCTGCATATCCTTATGTCCTCATGCACTTACACAATTCACTTACACAGTATCAATTGCTTATATTTCTCAAATCTTCATTTCTTACCTTTGGCAGTATTACTACTTTGTTCGGCTGATGGGACGGAAAGCATCTCATGTGGCTTTGGAATGTGCTCTTCAATCGCATCCAAATATGGTTAGACATATCCTTCTTTTATTTTGTGTTCTCCTAGTTGATCGACAATACAGAATTTACTGATTTAATCTGGCTTGAATCATTTTCAGGTTATACTAGGTGAGGAGGTTGCTGCATCAAAACTTACAATTTTTGATATCACGAAGCAGATATGTGACGCAGTCCAGGCAAGGGCTGAAAAGGGTAGGAATAAAGTTATCTTATAGGCTTCGTCTTCTAGTCCCATGTTTCCAGTTCATACCATCTTGTACACATAAATATCATTCATTTCCCTCATTCCTGGTGGTCATATTGTCTTGTGCAGACAAAAATCATGGTGTTGTACTTATTCCTGAGGGACTTGTTGAAAGTATCCCTGAATTATATGCTTTGCTTCAGGTCAGCATCAGCACCCACTGTACTGGTTTTGTACATTGAAGGTTTATTACTGAGCTGAGCTAATATTTGCAGGAAATTCATGGGCTACATGATAAAGGTGTTTCTGTTGAGAACATATCTTCTCATCTTTCGCCTTGGGCTTCAGCTCTATTTGAATTTTTGCCTCCATTTATTAGGAAACAGGTATATATTTTATTTTTGTATAATATTCAGAAAATCATAATTTACAGAAGTTGTGTTGCTTCAACCTGTTCTTTCTGTCATGCAGCTACTTCTTCATCCTGAATCCGATGACTCCGCTCAACTTTCTCAGGCATGGTAGCACTGTGATTTATTTTGTTTTTATTATTGTATTACCTATATGTTCTGACAGCAATATATGCTTGTTTTTGCAGATTGAGACTGAGAAACTTCTAGCCCAATTAGTTGAAGCAGAAATGAACAAACGTCTGGTAAGCATGCTGTGGACACCCTAAAAATATTTACAGTTTTTACTTTCACTTGCTCTTTAAATGTAGCTTTATCCGTGCACATACGTTTGCCTTTTATTGCAGAAGGAAGGCACTTACAAAGGAAAGAAGTTCAATGCAATTTGTCACTTCTTTGGCTACCAAGCCAGAGGTGCCCTACCCTCAAAGTTCGACTGTGATTATGCTTATGTAAGTTTCTTCTTACTTCACTAGTTCGCTATTCGTGCATCATTTTGTTATTGTTGTTTACTGACCTTTGATTGTTTCATTGTTTGGTTCCAGGTTCTTGGGCATGTATGCTATCACATCTTAGCTGCTGGCTTAAATGGCTACATGGCCACTGTGACAAATCTTAGGAGTCCTGTGAACAAGTGGAAATGCGGTGCTGCTCCTATTACTGTGAGCATAGATTACTTTTTTATGCTATTAAATAATTTTTTTTAAAACTTGTAAATTGAAGACCTTTTCATGAGTTCAAGTATTACATAAGATAGACTTACTCGTCTCTACATTTCCTCATGAACAGTCCATGATGACCGTAAAGCGATGGTCACGAGGACCAGCTGCCAGTCAAATTGGGAAGCCTGCTGTTCACATGGCGAGTATCGACTTAAAAGGAAAACCATATGAGTATGTATTGAAAAATTTATCATTCCGATGAAAGTGTACATGTATTCATGGGCAAATATACTTGTGTTCTTTCAATTTTAGTTCGTTTTAGTCCATACTAATTATAATGTTAAATGATAATTAAAGTGCTATAAATGCTGTAATATGCTTAGGACACCATGCCATTTTTATTCTGCATTTGCTATTGGTCTTTTACTGAGGAAATGTTCTTTTGTTGCTCTGCAGGTTGTTGAGACAAAACTCTTCCAGCTTCTTGATGGAAGACATCTACAGAAACCCTGGTCCTCTGCAATTTGAGGGACCAGGTGGAGAGACAAAGCCGATTTCATTGTGTGTCGAAGATCGAGACTACATGGGGAGGATCAAACAATTGCAGGAGTATTTGGAGAAGGTGCTGTTAATTAGTTTGTTATTATTATTTATTTTGGCCTTTTGCTATCAAAACAACCAGGGTTAACCATCATCAGTACTTTTATCTCTTATCGTTGTTTCCTTTGCATGCCACGCAGGTCAAAAGTATTGTGAAGCCTGGATGCTCCCAGGATGTCCTGAAGGCAGCGTTAAGCGCCATGGCCTCTGTGACAGAGATGCTAACCATCATGTCTTCTCCCTCTTTCAGTGGCCAAGCAACCATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022810