Os11g0610600

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Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0610600| Description = Similar to RING-H2 finger protein ATL2N| Version = NM_001074795.1 GI:115486238 GeneID:4350904| Length = 1218 bp| De...")
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Gene Name

Os11g0610600

Description

Similar to RING-H2 finger protein ATL2N

Version

NM_001074795.1 GI:115486238 GeneID:4350904

Length

1218 bp

Definition

Oryza sativa Japonica Group Os11g0610600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25453563..25454780

Sequence Coding Region

25453563..25454780

Expression

GEO Profiles:Os11g0610600

Genome Context

<gbrowseImage1> name=NC_008404:25453563..25454780 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25453563..25454780 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgccggagccggacaaggacaagccgctgccgaagcccaagccgcccaagcccaagcccaagccgcccaagccggagccggagccgaacacgcgctcggcgccggagcgcgaccagacggccgccccgtacggcacggtgccccccgaccccttgtcctgcgccaccgactgctcgccggactgcgtgttctaccacctgtgcccttcgccgccgccgccggtggcgcccgtgcatctgaggtcgtcgcggctgcccacgccgctcatcgcgctgtcggcgtcgctgctcggcgtgtcggtggtgctgctcgtcgcgttgctggtgtgtcggcttatgagggggagggggaggagggggaggaggaggcgaggtgggcggaacgcgctcgcgccgcaggaggcgccgctgacgcagcagccgcagcagggggacgaggaaggtggggcggcgggggcggcgatggcggcggaggaggtggagggcgacgacgacgacgacgacggaggaggaggggttcaccacgtgtggtacatacgcaccgtggggctcgacgagcgcgccatcgccgccatcaccgcgctggtgtacgacgccaagaagaccggcggcggcatcgggctcgccggcggcggcggcggcggcggcgggggaagctgcgcggtgtgcctcaccgagttccgcgacggcgagacgctgcgcctgctgccgcggtgccgccacgcgttccaccgcggctgcatcgacacctggctccgcgcccacgtcaactgcccgctctgccgcgcgcccgtccagatcagcgacaagtccgccgccgccgccgcggcggcggcggccaacgccgcgccgggcgccgccgcggccgttcccggcggcgcgcccgcgccgaacccgcgcaacgcagctgccgccgaagccgacagaggagagctccagggctcgccggagcgcggcgtcaggcgagccgcgtcgatggtgacgctgccgaggcggccatggccggaggtctcgctccggtcgccggcgtcgaacagtgggcgcatgggcgagatgggcctcgccaagatcgctcgactgatgaaattctcggaagtgttggagatggccggcatcggagcgaccaggtcggtgtccttcggcggccacggcaggtccggccagtccgccgccgccggcgccggcaacaacgccgacgagatttcacggtga</cdnaseq>

Protein Sequence

<aaseq>MPPPEPDKDKPLPKPKPPKPKPKPPKPEPEPNTRSAPERDQTAA PYGTVPPDPLSCATDCSPDCVFYHLCPSPPPPVAPVHLRSSRLPTPLIALSASLLGVS VVLLVALLVCRLMRGRGRRGRRRRGGRNALAPQEAPLTQQPQQGDEEGGAAGAAMAAE EVEGDDDDDDGGGGVHHVWYIRTVGLDERAIAAITALVYDAKKTGGGIGLAGGGGGGG GGSCAVCLTEFRDGETLRLLPRCRHAFHRGCIDTWLRAHVNCPLCRAPVQISDKSAAA AAAAAANAAPGAAAAVPGGAPAPNPRNAAAAEADRGELQGSPERGVRRAASMVTLPRR PWPEVSLRSPASNSGRMGEMGLAKIARLMKFSEVLEMAGIGATRSVSFGGHGRSGQSA AAGAGNNADEISR</aaseq>

Gene Sequence

<dnaseqindica>1..1218#atgccgccgccggagccggacaaggacaagccgctgccgaagcccaagccgcccaagcccaagcccaagccgcccaagccggagccggagccgaacacgcgctcggcgccggagcgcgaccagacggccgccccgtacggcacggtgccccccgaccccttgtcctgcgccaccgactgctcgccggactgcgtgttctaccacctgtgcccttcgccgccgccgccggtggcgcccgtgcatctgaggtcgtcgcggctgcccacgccgctcatcgcgctgtcggcgtcgctgctcggcgtgtcggtggtgctgctcgtcgcgttgctggtgtgtcggcttatgagggggagggggaggagggggaggaggaggcgaggtgggcggaacgcgctcgcgccgcaggaggcgccgctgacgcagcagccgcagcagggggacgaggaaggtggggcggcgggggcggcgatggcggcggaggaggtggagggcgacgacgacgacgacgacggaggaggaggggttcaccacgtgtggtacatacgcaccgtggggctcgacgagcgcgccatcgccgccatcaccgcgctggtgtacgacgccaagaagaccggcggcggcatcgggctcgccggcggcggcggcggcggcggcgggggaagctgcgcggtgtgcctcaccgagttccgcgacggcgagacgctgcgcctgctgccgcggtgccgccacgcgttccaccgcggctgcatcgacacctggctccgcgcccacgtcaactgcccgctctgccgcgcgcccgtccagatcagcgacaagtccgccgccgccgccgcggcggcggcggccaacgccgcgccgggcgccgccgcggccgttcccggcggcgcgcccgcgccgaacccgcgcaacgcagctgccgccgaagccgacagaggagagctccagggctcgccggagcgcggcgtcaggcgagccgcgtcgatggtgacgctgccgaggcggccatggccggaggtctcgctccggtcgccggcgtcgaacagtgggcgcatgggcgagatgggcctcgccaagatcgctcgactgatgaaattctcggaagtgttggagatggccggcatcggagcgaccaggtcggtgtccttcggcggccacggcaggtccggccagtccgccgccgccggcgccggcaacaacgccgacgagatttcacggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0610600, RefSeq:Os11g0610600