BGIOSGA022835

From RiceWiki
Revision as of 13:23, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022835| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022835, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022835

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022835, complete gene.

LocusTag

OSJNBA0012F14.37

Ensembl Transcript ID

BGIOSGA022835-TA

Ensembl Protein ID

BGIOSGA022835-PA

Length

3664

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:14177140..14180803

Sequence Coding Region

14177140..14177311,14177986..14178086,14178192..14178385,14180341..14180803

Genome Context

<gbrowseImage1> name=IndicaChromosome06:14177140..14180803 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:14177140..14180803 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAGGCTCTCCTCGCCGTCGTCGTCGTCGCCGTGGCGGCGGTGCTCGAGCTGGGGCTCGTCGGAGCCAACTTCCAGGATCAGTGTGACATCACGTGGGAGCCACAGAACGCCAAGATGACGGAGGGAGGAGACCACCTCACGCTCTCCCTTGTCAGCAACTCCTCTGGTTGTATGCTCCGGACCAAGAAGCAGTTCATCTACGGCAGCGTGTCGACTCGCATCCAGCTTGTGAAGGGCAACTCGGCCGGCACCGTCACCACCTACTACACATCGTCCATCGGCGACAAACACGACGAGATCGACTTCGAGTTCCTGGGCAACTCCAGCGGCCTCCCCTACACCTTCCACACCAACGTCTTCGCCGACGGCGTCGGCAGCCGCGAGATGCAGTTCCGCCCCTGGTTCGACCCCACCGACGGCTACCACAACTACACCATCTTCTGGAACCCCTGCATGATCGTGTGGTTCGTGGACAGCATCCCAATCAGGGTGTTCCGGAACCACGAGAAGGAAGGGGTGCCGTTCCCGACGAAGCGGCCGATGTACGCCTTCTCCAGCATCTGGGCGGCGGAGGATTGGGCCACGCAAGGTGGCCGCGTCAAGACGGACTGGACCAAGGCCCCTTTCGTCGCCGAGTACCGTGACATCGGCCTCAACGTCTGTGAGTGCCCCGGCTCAGGCTCCGGCTCCGGCTCCGGCTCCGGCTCCAACTCTACCTCCGGCGATGCCGAGGACCCGGCGTGCGCGCAGCGGTGCACGACGTCGGACCACTGGTACGCGGCGGAGGGGCTGTGCCAGCTGAGCGACAAGCAGCTGCGGCAGATGAAGGCGGTGCAGCTGGGCTACACCATCTACGACTACTGCGCCGACGCCCAGGCCAAGGGACGCCCCGTGCCGCCGGAGTGCAGCATGCCGCAGTACTGA</cdnaseq>

Protein Sequence

<aaseq>MAKALLAVVVVAVAAVLELGLVGANFQDQCDITWEPQNAKMTEGGDHLTLSLVSNSSGCMLRTKKQFIYGSVSTRIQLVKGNSAGTVTTYYTSSIGDKHDEIDFEFLGNSSGLPYTFHTNVFADGVGSREMQFRPWFDPTDGYHNYTIFWNPCMIVWFVDSIPIRVFRNHEKEGVPFPTKRPMYAFSSIWAAEDWATQGGRVKTDWTKAPFVAEYRDIGLNVCECPGSGSGSGSGSGSNSTSGDAEDPACAQRCTTSDHWYAAEGLCQLSDKQLRQMKAVQLGYTIYDYCADAQAKGRPVPPECSMPQY</aaseq>

Gene Sequence

<dnaseqindica>1..172#847..947#1053..1246#3202..3664#ATGGCGAAGGCTCTCCTCGCCGTCGTCGTCGTCGCCGTGGCGGCGGTGCTCGAGCTGGGGCTCGTCGGAGCCAACTTCCAGGATCAGTGTGACATCACGTGGGAGCCACAGAACGCCAAGATGACGGAGGGAGGAGACCACCTCACGCTCTCCCTTGTCAGCAACTCCTCTGGTAATTAATTGTCATATCTGATCCATTTACAGTTTTATGTTACTGATCAATAGCATGCATGTCTGATCAATCATCAATAGTGTGTACATTTATCTTGTGGGTACTTTTCTTTTTCACATTCAACACCTCTTGGGAGCAATATAATTTATGGTACTGATTGTGCATTAACACACTTTGTTTCCATCAGAAGAATTTTGTTTTACTTTTGACCAGTACAGTTAGGCCTAATTCATTGCATATATATGATTGTACGTCGCATGCTAGTCATGTTTATAATGTGCACTACCACATAAATTTGGTTTTAGCTCACATCATCAATTAGTTAATTCCTCAATTTGTTTGTTCTAGTTAACCTTGGTTTGGGTAGCCATGTTTCAGCCCAATCAGTTGAGTCAAACAAATGGGCTCAAATAGCAAACTGTCCCATCCATTAAGCCCATTTCCCCATTTTCCTTATATCTGAATGATTCTTACATAATTGGCTGTATTAGAGAGGGTGGAGGATGGAAAAAAGAGGTGGTAAAAGCCACACGGCCGTGACGATTAAATGCATTCTGAAATGATCGATCAGCTGTTTTCTTCCCTGAATCAGAAATGAACTAGTGGTCGATCACCACAAACTAAATTTAATTAATGTATCGATCGTGCGTGGCATGATATGCACTGGGCTGCAGGTTGTATGCTCCGGACCAAGAAGCAGTTCATCTACGGCAGCGTGTCGACTCGCATCCAGCTTGTGAAGGGCAACTCGGCCGGCACCGTCACCACCTACTACGTGCGTACATGACATCTCAATTTTTTCCATCAAAACAAATGATCGTCAGCTCTCAACTGAACCGAGATCCCCTCACAAGTCACAAATACAAAAATGTGGTTGCAGACATCGTCCATCGGCGACAAACACGACGAGATCGACTTCGAGTTCCTGGGCAACTCCAGCGGCCTCCCCTACACCTTCCACACCAACGTCTTCGCCGACGGCGTCGGCAGCCGCGAGATGCAGTTCCGCCCCTGGTTCGACCCCACCGACGGCTACCACAACTACACCATCTTCTGGAACCCCTGCATGATCGTGTACGTAACGTAAACAATCTAAGCTACCTACCATGCACATAACCCACTGAGGCCTTGTTCGATTAATCCATGTGAGAGAGGGATTGGAGGGGATTTATTCTATGCCTATTGTGGTGTGGAATTATTTTCCCTCAATCCCTTTCAATCCTCTTCAATCCCCTCTAAACTGAACAAGGCCTGATGGATCCAAAAGAGTTATACGATGGTGTCATAATATACATACCAATGTTATAGTATGCTAATTACATTTAGACTAACTAGCATGGTGGCCCGTGCAAATTGCGCGGCTAGCATCATTATTTTTTCTCTCATATAATAGCATATATGTTTTCTCATTATATTATTCAAATATATTAAAATGACAACATAATTTTAAATTTTGCAATAACTTTACAAAACTACTAATGTGTAATATTCATATTATATTTTATATACGTGATAGTTATTAATTATTTTTAATATCAAATTTTAGTTATTTGTAAATTATATATATTCCTATATGGATTCTAGACTTGTCTTTTAATATTTCTTTTTTTAATTCTGAATTTTCTGTAAATTGTATTTCTATATAGACTATATGATTTTCTTCCAATATTATTTATTTTTATTTCTGATTTTTCATATTATATTTTATATACTTGTTAGTTATTAATTATTTTTAATATCAAATTTTAGTTATTTTTATATTATATATATTCCTATATAGACTCTAGACTCGTCTTTTAATATATTTTTTAATTCCGAATTTTCTGTAAATTGTATTTTTATATAGACTCTATGCTCTTCCTCCAATATTATTTATTTTTATTTCTGAATTTTTATTATTTCTAATTGTATTTCTATGTGGACTCTAAACTCATCTTTTAGTATTATTTAATTTTTTAATTTTGAATTTCAGTTACTTCTAAATTGTATTCCTATGTTGACCTTAAACTATTCTTCCCATGTTTTTCTTAATTTTGAATTTTAGTTATTTGTAGATTGTATTTTTATACAGACTCTAAACTCTATTTTTTAATTTTATTATGTTTATTCCAAATTTTAGTAAGTTTTAAATTCATATATGGACTCTATACTCTACTTGTAATATTCCTTATTTTTTAATTCCGAATTTCTATTTTTTTTCTTAATTGTATTTCTATATGGACTCTATACTCTACTTCTAATATTCCTTATTTTTAATTCCAAGTTTATATTATTTCCTAATTGTATTTCTATATAGACTCTATACTCTACTTCTAATATTCCTTATTTTTAATTCCGAATTTCAGTTATTTCCTAATTATATTTCTATATGGACTCTAGTCTTCTCTTCTAATATTCCTTTTTTTAATTCCGAATTTCAACTATTTCTAAATTGTATTTCTATATGGACTCTAGTCTTTTCTTCTAATATTCCTTATTTTTTAATTCCGAATTTCAGATATTTCTAAATTGTATTTCTATATGGACTCTGTCTTTTCTTTTTCTTCGATTAATGTGATAATTTCTAGGCCATGAGAGCGAACGTGGAGGCTCCTTTTTCTTTTCTATATGGACTCTAGTCTCCTATTATAATATTCCTTATTTTTTAATTCCGAATTTCACCTATTTCTAAATTGTATTTCTATATGGACTCTAGTCTTCTCTTCTAATATTCCTTATTTTTTAATTCCGAATTTCAGCTATTTCTAAATTGTATTTCTATATGGACTCTGTTTTTTTCTTTTTCACCGATTAATGTGAGAATTTCTAGACCATGAGAGTGAACGTGGAGGCTCCTTTTTCTGTTCCTTTAATAATATAATAGATAGATAGATAGATGTGCTATAATATATGAAAATAGTTTAACCACAGGTTTTATCAAAAGTCATCGGTATTGTCTGACCAAACAACCAATAATGTTCCGTCATCTCTACGATCAGATCTCACTGGACAGACGACTCAATTGAGAGACACAAATATTTTTGTTTCAGGTGGTTCGTGGACAGCATCCCAATCAGGGTGTTCCGGAACCACGAGAAGGAAGGGGTGCCGTTCCCGACGAAGCGGCCGATGTACGCCTTCTCCAGCATCTGGGCGGCGGAGGATTGGGCCACGCAAGGTGGCCGCGTCAAGACGGACTGGACCAAGGCCCCTTTCGTCGCCGAGTACCGTGACATCGGCCTCAACGTCTGTGAGTGCCCCGGCTCAGGCTCCGGCTCCGGCTCCGGCTCCGGCTCCAACTCTACCTCCGGCGATGCCGAGGACCCGGCGTGCGCGCAGCGGTGCACGACGTCGGACCACTGGTACGCGGCGGAGGGGCTGTGCCAGCTGAGCGACAAGCAGCTGCGGCAGATGAAGGCGGTGCAGCTGGGCTACACCATCTACGACTACTGCGCCGACGCCCAGGCCAAGGGACGCCCCGTGCCGCCGGAGTGCAGCATGCCGCAGTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022835