Os11g0613900

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Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0613900| Description = Similar to Transposase (Fragment)| Version = NM_001074799.2 GI:297612177 GeneID:4350911| Length = 2211 bp| Definiti...")
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Gene Name

Os11g0613900

Description

Similar to Transposase (Fragment)

Version

NM_001074799.2 GI:297612177 GeneID:4350911

Length

2211 bp

Definition

Oryza sativa Japonica Group Os11g0613900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25641119..25643329

Sequence Coding Region

25641119..25641168,25641250..25643329

Expression

GEO Profiles:Os11g0613900

Genome Context

<gbrowseImage1> name=NC_008404:25641119..25643329 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25641119..25643329 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggacactgaagagatagtggagagggaagttgctgcatggttagaggagcacaaggatgaagaggagcaggagcaagcagccacggagaatgaacatgcagccacggaggaagaggaaaagaaaagaaaggctattgttccaagatctgatgtatggggcagcttcagcaaggtaaaaatttccaatggagaggagagagctaagtgtaaatactgtcaaaagttgtttcgttgtgaccctaggacaaatggtacatcatctttgaaaaatcacttgaaaatctgcaaaaagaatcctaacaagccagtaattgataaccaacgcactttgcaaattactcctggaagtggtggtagtagtgttggtacttgttccacatggaaatttgatattgaagacttgaggaatagttttgctgaaatgataattgaagatgaacaaccttttgtcttaagtgaacgtccaggtcttaggaagtttttggctaaagcatgtccacggtttactttgccatctagaagaactaccactagagcatgtgtcaaagtgtatgatgtgcaaagattgaagcttaagaaatttttgaaggaaaattgtgagagggttagcctcacaacagacacatggactgctaacaccaaccaaaactacatgtgtgtcactgcacattttattgacaatgattggaagctccataaaaaaatcataggcttcttcctagtaaaggggcatagaggggaggatattgggaaatctttagacaattgcttatctgagtggagaattgatatagttttgtcaataacggttgacaatgctagtgctaacaataatgcaattaaatacatgaagagggtattgaatgaatcaaaaggatgcattgctgaaggggagttccttcatatgagatgtgttgcacatattatcaacttgatagtggctgatggtttaaaagaaatcaataaatccatttgccgtgttcgtgctgctattaagtttgtcaaggccggaccagctaggttggcaaaatttaagaaatgtgctgagttggcaaaagtacaaaccaaagcatttttgacactagatgtttgcactatgtggaactcaacctaccatatgcttaatattgcccagcaatatgagaaggcatttgaaaggtacagtgatgaagacccatattacaagctagatttagaaggtcatgatgggccaggagttcctgaaaaatcagattgggataaagctaggaagatggctgaatttcttgaacatttctatgaactgactcttcgtgtttcagcaacaagtcgtccaacatctcacacattcttccatgaaattgctggtgtagttgttttgctgagacagtggtgcaacagtgaggatttgttgtgtgcagagatgggtaagagaatgctactgaagtaccaaaaatattggggagagatagggccgggggttcaaaatctgaatttaattgttttcttctgtgtagcattggatccaaggtataaacttaatagttacattaagatggcaactatggtcatgtttggtgatgaaataggagagcaattgtggacaacagtggtcaattcctttcattccctatttcatgaatacaaagaaatatatactcctaatgagccggtagcagcacctaatgatattcagggatcactatcaacaagcaagaggctcatgaggtctatagttgcacaacaaatgagcaacaatggagcttcaaggagcattgccaaatctgaactagacaagtacttttcagaagacaatgaggaggatacaaaaggatttgacatccttaagtattggaaggacaactcaactaggcttccattgctatctcgtatggcccgtgatctcctagcaatccccatctcatccgtcgcttctgagtcagcctttagtgcaggtggaagaacactagatgactttaggagctcactaacaccaacaatggttgagcgcctaatttgtgcaaatgactggcttcgtggttgcaactctattagtgttgaagaaaatgccaaagatttgtccaagcttgaagaagaacttgttggccaagacattacagaggacactaatgctaccaaggcctaa</cdnaseq>

Protein Sequence

<aaseq>MEDTEEIVEREVAAWLEEHKDEEEQEQAATENEHAATEEEEKKR KAIVPRSDVWGSFSKVKISNGEERAKCKYCQKLFRCDPRTNGTSSLKNHLKICKKNPN KPVIDNQRTLQITPGSGGSSVGTCSTWKFDIEDLRNSFAEMIIEDEQPFVLSERPGLR KFLAKACPRFTLPSRRTTTRACVKVYDVQRLKLKKFLKENCERVSLTTDTWTANTNQN YMCVTAHFIDNDWKLHKKIIGFFLVKGHRGEDIGKSLDNCLSEWRIDIVLSITVDNAS ANNNAIKYMKRVLNESKGCIAEGEFLHMRCVAHIINLIVADGLKEINKSICRVRAAIK FVKAGPARLAKFKKCAELAKVQTKAFLTLDVCTMWNSTYHMLNIAQQYEKAFERYSDE DPYYKLDLEGHDGPGVPEKSDWDKARKMAEFLEHFYELTLRVSATSRPTSHTFFHEIA GVVVLLRQWCNSEDLLCAEMGKRMLLKYQKYWGEIGPGVQNLNLIVFFCVALDPRYKL NSYIKMATMVMFGDEIGEQLWTTVVNSFHSLFHEYKEIYTPNEPVAAPNDIQGSLSTS KRLMRSIVAQQMSNNGASRSIAKSELDKYFSEDNEEDTKGFDILKYWKDNSTRLPLLS RMARDLLAIPISSVASESAFSAGGRTLDDFRSSLTPTMVERLICANDWLRGCNSISVE ENAKDLSKLEEELVGQDITEDTNATKA</aaseq>

Gene Sequence

<dnaseqindica>2162..2211#1..2080#atggaggacactgaagagatagtggagagggaagttgctgcatggttagaggagcacaaggatgaagaggagcaggagcaagcagccacggagaatgaacatgcagccacggaggaagaggaaaagaaaagaaaggctattgttccaagatctgatgtatggggcagcttcagcaaggtaaaaatttccaatggagaggagagagctaagtgtaaatactgtcaaaagttgtttcgttgtgaccctaggacaaatggtacatcatctttgaaaaatcacttgaaaatctgcaaaaagaatcctaacaagccagtaattgataaccaacgcactttgcaaattactcctggaagtggtggtagtagtgttggtacttgttccacatggaaatttgatattgaagacttgaggaatagttttgctgaaatgataattgaagatgaacaaccttttgtcttaagtgaacgtccaggtcttaggaagtttttggctaaagcatgtccacggtttactttgccatctagaagaactaccactagagcatgtgtcaaagtgtatgatgtgcaaagattgaagcttaagaaatttttgaaggaaaattgtgagagggttagcctcacaacagacacatggactgctaacaccaaccaaaactacatgtgtgtcactgcacattttattgacaatgattggaagctccataaaaaaatcataggcttcttcctagtaaaggggcatagaggggaggatattgggaaatctttagacaattgcttatctgagtggagaattgatatagttttgtcaataacggttgacaatgctagtgctaacaataatgcaattaaatacatgaagagggtattgaatgaatcaaaaggatgcattgctgaaggggagttccttcatatgagatgtgttgcacatattatcaacttgatagtggctgatggtttaaaagaaatcaataaatccatttgccgtgttcgtgctgctattaagtttgtcaaggccggaccagctaggttggcaaaatttaagaaatgtgctgagttggcaaaagtacaaaccaaagcatttttgacactagatgtttgcactatgtggaactcaacctaccatatgcttaatattgcccagcaatatgagaaggcatttgaaaggtacagtgatgaagacccatattacaagctagatttagaaggtcatgatgggccaggagttcctgaaaaatcagattgggataaagctaggaagatggctgaatttcttgaacatttctatgaactgactcttcgtgtttcagcaacaagtcgtccaacatctcacacattcttccatgaaattgctggtgtagttgttttgctgagacagtggtgcaacagtgaggatttgttgtgtgcagagatgggtaagagaatgctactgaagtaccaaaaatattggggagagatagggccgggggttcaaaatctgaatttaattgttttcttctgtgtagcattggatccaaggtataaacttaatagttacattaagatggcaactatggtcatgtttggtgatgaaataggagagcaattgtggacaacagtggtcaattcctttcattccctatttcatgaatacaaagaaatatatactcctaatgagccggtagcagcacctaatgatattcagggatcactatcaacaagcaagaggctcatgaggtctatagttgcacaacaaatgagcaacaatggagcttcaaggagcattgccaaatctgaactagacaagtacttttcagaagacaatgaggaggatacaaaaggatttgacatccttaagtattggaaggacaactcaactaggcttccattgctatctcgtatggcccgtgatctcctagcaatccccatctcatccgtcgcttctgagtcagcctttagtgcaggtggaagaacactagatgactttaggagctcactaacaccaacaatggttgagcgcctaatttgtgcaaatgactggcttcgtggttgcaactctattagtgttgaagaaaatgccaaagatttgtccaagcttgaagaaggtgaaacattttaagatgcaattagtttacttcttatgttagtttattatttatattaactgtgtttcttcttatgcatagaacttgttggccaagacattacagaggacactaatgctaccaaggcctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0613900, RefSeq:Os11g0613900