BGIOSGA022875

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Revision as of 13:24, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022875| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022875, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA022875

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022875, complete gene.

LocusTag

OSJNBA0031J07.13-1

Ensembl Transcript ID

BGIOSGA022875-TA

Ensembl Protein ID

BGIOSGA022875-PA

Length

3404

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:15047351..15050754

Sequence Coding Region

15047351..15047875,15047964..15048104,15049639..15049989,15050109..15050168,15050299..15050418
,15050605..15050754

Genome Context

<gbrowseImage1> name=IndicaChromosome06:15047351..15050754 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:15047351..15050754 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGCCCCGACATTGAGGACCGCGCCGCGGTGGCCGGCGATGCTGGCATGGAGGTCGTCGGGATGTCGTCGGACGACATGGATCAGTTCGACTTCTCCGTCGATGACATAGACTTCGGGGACTTCTTCCTGAGGCTGGAGGACGGTGATGTGCTCCCGGACCTCGAGGTCGACCCGGCCGAGATCTTCACCGACTTCGAGGCAATCGCGACGAGTGGAGGCGAAGGTGTGCAGGACCAGGAGGTGCCCACCGTCGAGCTCTTGGCGCCTGCGGACGACGTCGGTGTGCTGGATCCGTGCGGCGATGTCGTCGTCGGGAAGGAGAACGCGGCGTTTGCCGGGGCTGGAGAGGAGAAGGGAGGGTGTAACCAGGACGATGATGCGGGGGAAGCGAATGCCGACGATGGAGCCGCGGCGGTTGAGGCCAAGTCTTCGTCGCCGTCATCGTCGACGTCGTCGTCGCAGGAGGCTGAGAGCCGGCACAAGTCATCCAGCAAGAGCTCCCATGGGAAGAAGAAAGCGAAGGTGGACTGGACGCCTGAGCTTCACCGGAGGTTCGTGCAGGCGGTGGAGCAGCTCGGCATCGACAAGGCCGTGCCGTCGAGGATACTTGAGATCATGGGGATCGACTCGCTCACCCGGCACAACATAGCCAGCCATCTTCAGAAGTACCGGTCACACAGAAAACACATGATTGCGAGAGAGGCGGAGGCAGCGAGTTGGACCCAACGGCGGCAGATTTACGCCGCCGGTGGAGGTGCTGTTGCGAAGAGGCCGGAGTCCAACGCGTGGACCGTGCCAACCATTGGCTTCCCTCCTCCTCCGCCACCACCACCATCACCGGCTCCGATGCAACATTTTGCTCGCCCGTTGCATGTTTGGGGCCACCCGACGATGGACCCGTCCCGAGTTCCAGTGTGGCCACCGCGGCACCTCGTTCCCCGTGGCCCGGCGCCACCATGGGTTCCACCGCCGCCGCCGTCGGACCCTGCTTTCTGGCACCACCCTTACATGAGGGGGCCAGCACATGTGCCAACTCAAGGGACACCTTGCATGGCGATGCCCATGCCAGCTGCGAGATTTCCTGCTCCACCGGTGCCAGGAGTTGTCCCGTGTCCAATGTATAGGCCATTGACTCCACCAGCACTGACGAGCAAGAATCAGCAGGACGCACAGCTTCAACTCCAGGTTCAACCATCAAGCGAGAGCATCGACGCAGCTATCGGTGATGTTTTATCGAAACCGTGGTTGCCTTTGCCTCTTGGACTGAAGCCACCTTCAGTGGACAGTGTGATGGGCGAGCTGCAGAGGCAAGGCGTAGCAAATGTTCCTCCAGCGTGTGGATGA</cdnaseq>

Protein Sequence

<aaseq>MCPDIEDRAAVAGDAGMEVVGMSSDDMDQFDFSVDDIDFGDFFLRLEDGDVLPDLEVDPAEIFTDFEAIATSGGEGVQDQEVPTVELLAPADDVGVLDPCGDVVVGKENAAFAGAGEEKGGCNQDDDAGEANADDGAAAVEAKSSSPSSSTSSSQEAESRHKSSSKSSHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHMIAREAEAASWTQRRQIYAAGGGAVAKRPESNAWTVPTIGFPPPPPPPPSPAPMQHFARPLHVWGHPTMDPSRVPVWPPRHLVPRGPAPPWVPPPPPSDPAFWHHPYMRGPAHVPTQGTPCMAMPMPAARFPAPPVPGVVPCPMYRPLTPPALTSKNQQDAQLQLQVQPSSESIDAAIGDVLSKPWLPLPLGLKPPSVDSVMGELQRQGVANVPPACG</aaseq>

Gene Sequence

<dnaseqindica>1..525#614..754#2289..2639#2759..2818#2949..3068#3255..3404#ATGTGCCCCGACATTGAGGACCGCGCCGCGGTGGCCGGCGATGCTGGCATGGAGGTCGTCGGGATGTCGTCGGACGACATGGATCAGTTCGACTTCTCCGTCGATGACATAGACTTCGGGGACTTCTTCCTGAGGCTGGAGGACGGTGATGTGCTCCCGGACCTCGAGGTCGACCCGGCCGAGATCTTCACCGACTTCGAGGCAATCGCGACGAGTGGAGGCGAAGGTGTGCAGGACCAGGAGGTGCCCACCGTCGAGCTCTTGGCGCCTGCGGACGACGTCGGTGTGCTGGATCCGTGCGGCGATGTCGTCGTCGGGAAGGAGAACGCGGCGTTTGCCGGGGCTGGAGAGGAGAAGGGAGGGTGTAACCAGGACGATGATGCGGGGGAAGCGAATGCCGACGATGGAGCCGCGGCGGTTGAGGCCAAGTCTTCGTCGCCGTCATCGTCGACGTCGTCGTCGCAGGAGGCTGAGAGCCGGCACAAGTCATCCAGCAAGAGCTCCCATGGGAAGAAGAAAGCGAAGGTGCAACCCTCAAGGGGCATGCACACAATTTAGCTCCACCTGTGGCATTACAAGCCGTTGCTCATGCTCATGCTGCATGGTTCTGCAGGTGGACTGGACGCCTGAGCTTCACCGGAGGTTCGTGCAGGCGGTGGAGCAGCTCGGCATCGACAAGGCCGTGCCGTCGAGGATACTTGAGATCATGGGGATCGACTCGCTCACCCGGCACAACATAGCCAGCCATCTTCAGGTGCGTGCATGGTGGAATCTCCTGTCTCACACTCTCAGTTTACGTGGGGAAATATTTTTTATTTCCTAATTGTACCGTCCTTCGTTGGACTATAAAATACTTCAAACCAAACATTTATTTAAATCATGGCTATGCACGACGTTGGTTCCAGTTTTCAAATTCTAATCGTGTTATTTTTTTATAATATGAGTATTATTCTTACAGCAAGACGCGTGTGTATATATTATATATATGAAACCTTATTCCTACTAGCTTCATTTTGTAGGTTACCTGGTTTCTCAGTGTAGATCGATGATAAATGAACTATCTAATAATTTTATTTGAGCTCCGATAAAGATATGTAGGTTTGGCCCGTTGGTTTGTTATTTACTTTAGTTTCTATGTAGATTTCTTTTTGTTCCATGTAAAAGTAGATATATGATGTAGATCCCAGGTTTTAATTCATATATTTTCTAAAAGAAACTACAAACTTAATTGGGGGAAAAACTCCCAGTGATAACTTCATACAATACGGAAATTGGTATTATTGGCTTAAAAACTAACGTTACGTCATCAGATAAAGAATGCCTTTTTTAAAAAAAATGGACAGCAATCCATCTATGTAAGGTCTTACCCTTAGTTAATTGTAGAACTTCAATTCCCAGCTAGATAAGCTGCAGATTTCAGTCTCCAAATCTTTTTGAATTTTAAAGTTTGACTTTGAGAATAATTTTAGGTACAATTTTTATTTATGTTCTTAACAACCATGAAAGGACAACCAGGGAAACATAAGTGATAAGAAAACCTCTAATAACAAGTTGTAGGATTTAAAATCATCTTTGGAAAACATTTTTGCCATAACTCAATATATGTGGTAAACTGAGTACTATCAAACGAACATATGTACACGAAGAACTTCAACTCACACGGCATGTCCTGCAGTAGAACAAAAATTTGAACCTGGAGCACATGGATATCATAAATTACAAAAATCCAAAGTTGAGACACTGTTACAGAGCGTGACAGTGAAGATTTTCATCACTCTGTCCAGTGTCCACCCTTTCTCGCTTCCCACAGTACCGGTCATCTGCTGATCATCTGTGAGCTGTAAGTTCACGGATTGAACTGTAAGTTTGTAGCCTATTGTTTGGACTTTCAGTTCTATGTAGTACTCTAGTGGGATCTGTTTTCACCGCATAAAGTGTGATATATTTTGGTCCACATAACAGTACATATGGTATTTGCTTTCTACACCCAGCAGAAGAACCATATTACTCCCTCCGTCCTTAAATATAAGTATTTCTGACTATGAATCTGGACAACTGTGTCTCCAGATCATAGCTAAAAGTTGTTATATTTTGGGATGGATGTAGTATTTATAATAATAAGATGTGTTACATGTTATTTATTTCGCAATGGAGGGAGTAAGTCAGAATTGTGACTTCTATTTACAAGACATCTTCAAATTGTTCAAACGAATATAGTATAGACCTTGTTATTTTGGGATCGTCCTGGCCCACTAATTGACTTATCACTTCATGTAAATTATTTGCAGAAGTACCGGTCACACAGAAAACACATGATTGCGAGAGAGGCGGAGGCAGCGAGTTGGACCCAACGGCGGCAGATTTACGCCGCCGGTGGAGGTGCTGTTGCGAAGAGGCCGGAGTCCAACGCGTGGACCGTGCCAACCATTGGCTTCCCTCCTCCTCCGCCACCACCACCATCACCGGCTCCGATGCAACATTTTGCTCGCCCGTTGCATGTTTGGGGCCACCCGACGATGGACCCGTCCCGAGTTCCAGTGTGGCCACCGCGGCACCTCGTTCCCCGTGGCCCGGCGCCACCATGGGTTCCACCGCCGCCGCCGTCGGACCCTGCTTTCTGGCACCACCCTTACATGAGGGTAAGTATGTGTATATACACTATAATGATATTGTCAAGTGCAATGCTTAGATACCAGAGAGCATATACGTTAGTTTTCAATTGGTTCTTAGGATGTATATTTGTTTGATGTTTCTGTAGGGGCCAGCACATGTGCCAACTCAAGGGACACCTTGCATGGCGATGCCCATGCCAGCTGCGGTAAGATATTATGTAATTACTTACATGGAAATGTCACCTCTGCTTGACATATAGTTTCAGTTAGGTGACATTTCATCACTATAGCTAGTCTGCAGAATTTTGATGGGCTGGATGGTATCTCATGTTTCAGAGATTTCCTGCTCCACCGGTGCCAGGAGTTGTCCCGTGTCCAATGTATAGGCCATTGACTCCACCAGCACTGACGAGCAAGAATCAGCAGGACGCACAGCTTCAACTCCAGGTTCAACCAGTAAGTATATATCAAACATTTGTAACTATAACTTCATCAGAAGGAACATAAATATTGAAGATCCATACTGGCAATGTTTAGCTGAAACTATCATATCTCTAACCATATAACTTCATCACAAGGAAGATTCAGAAGTTTCTTCATGAATTAAATTGCTTCATTTTCATTGTTTTAATTTTTTCCCAGTCAAGCGAGAGCATCGACGCAGCTATCGGTGATGTTTTATCGAAACCGTGGTTGCCTTTGCCTCTTGGACTGAAGCCACCTTCAGTGGACAGTGTGATGGGCGAGCTGCAGAGGCAAGGCGTAGCAAATGTTCCTCCAGCGTGTGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022875