Os11g0614400

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Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0614400| Description = Similar to Patatin-like protein 1| Version = NM_001074800.1 GI:115486248 GeneID:4350912| Length = 3905 bp| Definiti...")
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Gene Name

Os11g0614400

Description

Similar to Patatin-like protein 1

Version

NM_001074800.1 GI:115486248 GeneID:4350912

Length

3905 bp

Definition

Oryza sativa Japonica Group Os11g0614400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25687155..25691059

Sequence Coding Region

25687348..25687524,25687890..25688071,25689108..25689462,25689699..25690001,25690652..25690888

Expression

GEO Profiles:Os11g0614400

Genome Context

<gbrowseImage1> name=NC_008404:25687155..25691059 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25687155..25691059 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcaatggcgaggcgacgacggggagcgagacggcggcgccggcgccggtgccggagccgaccccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcggcatccgcggcctcatcccggccaccatcctcgcctgcctcgaggccaagctccaggagctggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacgagcaccggggcgctgatcacgtccatgctggcggcgccggacgacgaccggcggccgctcttcgccgccggcgacctcaccaacttctacctcgagaacgggcccaagatcttcccgcagcggagggttgggttcttgacaccagtggcaaacctgatcggcgtggtgagggggcccaagtacgatggctcgttcttgcatgacaagatcaagagccttacgcatgacgttaccatctcaaacacggtcaccaacatcgttgtaccggctttcgatgtcaaatacttacaacccatcatcttttccacctatgaggccaagaatgagcccctcaagaatgcccacctctccgacatctgtatcagcacgtcagcagcgccgacatacttccccgcgcacttcttcaagaccaccgacgtctcctccggcaagtctcgggagttccacctcatcgatggcggtgtcgctgcaaacaacccgacaatggtagccatgtctatgatcagcaaggaagtgttgcgtgagaaccaggactttaaattgggtaagccagcagattacaagcactacctggtgatctcaatcgggacagggacggcgaagatggcggagaagtacaccgcgccggcatgcgccaaatggggtgtgctccggtggctctatgacggcggcttcaccccactcatcgacatcttcactcatgctagtgctgacatggtcgacatccacgcgtccgttctcttccagtctctctgctgcgagaagagctacctccgtattcaggacgattcgctggaggggcacacgtcgtcggtggacatcgcgacgaaggagaacatggaggcactgatcaagatcggcaaggaccttctgactaagcgagtggcgagggtgaacatcgacaccggagtatacgagcccgttgatggagagggcaccaacgaggaggcactcgctcgctttgccaagaagctctcagaggagagaaggctacgcagaaacaacctcagttcctcttga</cdnaseq>

Protein Sequence

<aaseq>MASNGEATTGSETAAPAPVPEPTPPPCQGRLITVLSIDGGGIRG LIPATILACLEAKLQELDGPEARIADYFDVIAGTSTGALITSMLAAPDDDRRPLFAAG DLTNFYLENGPKIFPQRRVGFLTPVANLIGVVRGPKYDGSFLHDKIKSLTHDVTISNT VTNIVVPAFDVKYLQPIIFSTYEAKNEPLKNAHLSDICISTSAAPTYFPAHFFKTTDV SSGKSREFHLIDGGVAANNPTMVAMSMISKEVLRENQDFKLGKPADYKHYLVISIGTG TAKMAEKYTAPACAKWGVLRWLYDGGFTPLIDIFTHASADMVDIHASVLFQSLCCEKS YLRIQDDSLEGHTSSVDIATKENMEALIKIGKDLLTKRVARVNIDTGVYEPVDGEGTN EEALARFAKKLSEERRLRRNNLSSS</aaseq>

Gene Sequence

<dnaseqindica>194..370#736..917#1954..2308#2545..2847#3498..3734#agaaagcacaagatccgaggagcagatcgaccaaaagtttctgatcccctcttcttctcgcttgcttctctcctactcgatcaatctcgctagagcttcttgcttgctttgatctctcgagcctctagcctagcttagctagctaagctagctactcatcagtgtcctaagtagagttgctagctagctaagcatggcgagcaatggcgaggcgacgacggggagcgagacggcggcgccggcgccggtgccggagccgaccccgccgccgtgccaggggaggctcatcaccgtgctgagcatcgacggcggcggcatccgcggcctcatcccggccaccatcctcgcctgcctcgaggccaagctccaggtatatacgtagcaagaacacacacacactgctgctagctcatcagctgatcagctcagctatggtgaaatcaaatgctgatctgcaaggaacggaacaatcgtgtgttcaacagcgaaaacatagtcgctacaatagagaagagtcaagggatcgatgatatcaaaggggatcgcagaccgtccatcagagatgcattgatgatagtgaatccaataagatgtcgtcccttgactgatcttgatccctattgctacacctaaactatttggaacatctaaatccctggttttaatataaatgatacaaggttttccgtattcggaaaaaaaatatgatgattaatttggtgatgattaattcaggagctggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacgagcaccggggcgctgatcacgtccatgctggcggcgccggacgacgaccggcggccgctcttcgccgccggcgacctcaccaacttctacctcgagaacgggcccaagatcttcccgcagcggaggtgcgtgtcgaatatcgatcgatctctgtctttttttcagagaatcgattcgcgatcgcatcacatgtcgatgatcatatcgctgcatttttgttgaatgctaatgttgattcgttcgtgacgggcatatgcacatgcaggttaattaattcaaagctttaaaacgattcttcttttgcgagaaaaaaagaaaagaaatttctgaagctcttgatatatatagatcgattgttcttggtaggacttgcatctgcctccttatgctccttggtaggaaaagactggtctatgtagtcaaaactatcatgacatatggcatcatctttgtcactcctttttattgattcgaagtcacataaccacacttaataaccagttttttattcgcaaataattgcttgtagttttgccatgttacctttatgctacagagagttttggttagaatttactttcttttctagataatagaatattttgttcatatggctggaatttacttgggtcaggctatgatttgcttgcttccacaaattgttttttttttgtttgggggggggcagacgaattaggattttattaagccgtttgtgaacttgttatgtcacttcaccactctgttttgtcctctcttttttttttctgcctacgaaggaaagtgaccaaatcagattagaacaaaggagttaaaaggtgtagtacggagtacacattgcaaaagacaacaaacgtggttgttgggaaaaaagcacatgctaaataacagtgctagacttgacctctttccaaatattgacactggttgatgacctgtcatacaaaaaaaagaattattccagggatataagtactgcaattattttgtgtactgctatctccctttctaaatataagtattttagttgacagtctcagaaatgctcctatattattactataagaagtattgataagagctataatttcaaatactatggtgacatcgaaaacaattttttttaaaagagcaattaagtaattatataaggttttgtagggttgggttcttgacaccagtggcaaacctgatcggcgtggtgagggggcccaagtacgatggctcgttcttgcatgacaagatcaagagccttacgcatgacgttaccatctcaaacacggtcaccaacatcgttgtaccggctttcgatgtcaaatacttacaacccatcatcttttccacctatgaggccaagaatgagcccctcaagaatgcccacctctccgacatctgtatcagcacgtcagcagcgccgacatacttccccgcgcacttcttcaagaccaccgacgtctcctccggcaagtctcgggagttccacctcatcgatggcggtgtcgctgcaaacaacccggtactgagcacataccatttaatacaagaaattttacttctctaagaggttaaaattgttgatatcaaaatttacatcagaagatgggataccttctaatatcttcttagtcaccgtaaaatcactcgtttagtataccttcaatctcaaaaggcaaaaatatcaattgtgaattgttggtaccatctcctcctgaacacaactttgaccattttattgagtgctcatgcatgcagacaatggtagccatgtctatgatcagcaaggaagtgttgcgtgagaaccaggactttaaattgggtaagccagcagattacaagcactacctggtgatctcaatcgggacagggacggcgaagatggcggagaagtacaccgcgccggcatgcgccaaatggggtgtgctccggtggctctatgacggcggcttcaccccactcatcgacatcttcactcatgctagtgctgacatggtcgacatccacgcgtccgttctcttccagtctctctgctgcgagaagagctacctccgtattcaggtgactaccatggtttgaaatttcgttaattttggcccccactgacaagcacaaatctccccgaaatttttggttttttatcaaatgtttgtaaatttagtcaaaatttaacaaattcaatcaaaatacgttaaaattaaaatatttttggtaaaaaaatggaaatcacgaaattttcaaatttctggcaaccaaggcggcaaccgaaattgcaaaccctggtgactactccctccctctgtttcaagttatatgtcgcattgatttattttcctaatcaaacttgtttaggtttgatcaaatttatagaaaaataaagtaacatttccaatacaaaataaatatattcaacgtaatatttaatgaaactaatttggtgctgtaaatgttactattttttttataaacttggtcaaatctagaagtttgactacggaaaaagtcgaaacgacttataatatgacacggaggaaatagctatatattaagttgcatactattatcggtctacttgtatcattacattaatatacttctaacaccagtaaaaattaacctagctactaaccgaccaactagttcacccaaaagcttctatattttcatcttctcgtagtcgtgacactaaaattgagtgttcgtgtatataggacgattcgctggaggggcacacgtcgtcggtggacatcgcgacgaaggagaacatggaggcactgatcaagatcggcaaggaccttctgactaagcgagtggcgagggtgaacatcgacaccggagtatacgagcccgttgatggagagggcaccaacgaggaggcactcgctcgctttgccaagaagctctcagaggagagaaggctacgcagaaacaacctcagttcctcttgagctgagctaaagctaagttagctagctagctcagttctagctaagctaagctaagatgtaaaattaagtaatacagcctgtgatgtagtaagtgtgatgtgggtgaggtattatgcatattgtaataatgttggtttggttttcaataattaatcagcatgtgtttatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0614400, RefSeq:Os11g0614400