Os11g0615000

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Revision as of 09:16, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0615000| Description = LNS2, Lipin/Ned1/Smp2 domain containing protein| Version = NM_001074805.1 GI:115486258 GeneID:4350917| Length = 2695...")
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Gene Name

Os11g0615000

Description

LNS2, Lipin/Ned1/Smp2 domain containing protein

Version

NM_001074805.1 GI:115486258 GeneID:4350917

Length

2695 bp

Definition

Oryza sativa Japonica Group Os11g0615000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:25749022..25751716

Sequence Coding Region

25749022..25749092,25749581..25749665,25749856..25749942,25750160..25750232,25750457..25750500
,25750616..25750744,25750876..25750977,25751104..25751160

Expression

GEO Profiles:Os11g0615000

Genome Context

<gbrowseImage1> name=NC_008404:25749022..25751716 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:25749022..25751716 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gatgctcacatatatttatggaaatggaatgcacgcattgtcatttcagatgttgatggaactatcaccaagtctgatgttcttggccagttcatgccgctggttggtgttgattggtctcaaaatggtgttgcacatttattttctgcaataaaggaaaatggatatcagttgcttttcttgagtgcgcgtgctatttcacaagctcacctgacaaggcagtttcttttcaaccttaagcaggatggaaaagctcttcctgatggccctgttgtgatatctcctgatgggctatttccatcactttacagagaagttatcagacgagctcctcacgaattcaagatctcatgcctaggggctatcaaagcactatttcctcctgactcaaatccattctatgctggatttggaaatagagatacagatgagcttagttacctcaaggttgggattcctatgggcaaaatttttattataaatcccaagggtgaagttgcggtgaatcgtcgagtagatacaaaatcatacacatccctccatgctcttgtcaatgggatgttccctccgatatcaacgtcatctgagcaggaggactacaatacttggaattactggaaaatgccgttacctgctgttgatatttga</cdnaseq>

Protein Sequence

<aaseq>DAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGVDWSQNGV AHLFSAIKENGYQLLFLSARAISQAHLTRQFLFNLKQDGKALPDGPVVISPDGLFPSL YREVIRRAPHEFKISCLGAIKALFPPDSNPFYAGFGNRDTDELSYLKVGIPMGKIFII NPKGEVAVNRRVDTKSYTSLHALVNGMFPPISTSSEQEDYNTWNYWKMPLPAVDI</aaseq>

Gene Sequence

<dnaseqindica>1..71#560..644#835..921#1139..1211#1436..1479#1595..1723#1855..1956#2083..2139#gatgctcacatatatttatggaaatggaatgcacgcattgtcatttcagatgttgatggaactatcaccaagtaagatgcagaactggaacatttaagaatttaagaattatagtttggatacttgattgccatgagcaaggatcgaaaaaagaccagaattttcaaaatttacagagctaggctggtaggcagtaactggcagagttaccagccagttacagccttactgggcctctttctgggtagctatttcttttgttgtgtttatactttgtacacatttttctcaagttgttttatttctttggtgttctctaaacattaacatcaatgttgcattgtaatcagtatggaaacacatttttccgaagaattatgaacaacaaaagcatgttccttcttgttggaaaacgtttatactactaataaaagagatggaaggcagtaaacttcatgtaactgaaacaattcataggaactagctgagttcacaaaacatgcaaaaagtattttaacttaacctaacaagtgcctacaatttatcaatataaatgtaggtctgatgttcttggccagttcatgccgctggttggtgttgattggtctcaaaatggtgttgcacatttattttctgcaataaaggtatgcatgctactcatgcaccattttaagttccacttccttatgtagcacaaaccagtaggaattgactgattattgcgttttatactgtgtgtgtgtgtttgtctctatctatgtgaattcatgcaccaatctggtcctaaaatgtttattgacttgagcttgttcttgttgccttccatttctgcaggaaaatggatatcagttgcttttcttgagtgcgcgtgctatttcacaagctcacctgacaaggcagtttcttttcaaccttaagcaggtttagtttagttctatccttatgccttccattattgatatgtatatgccctagtgcatagaaccataggattggtctcgtctttgtaagcttttatgtccaatgaactagcagaattggttgtatgtgtttggaaagccacacataaagataatcttaaactactctagattcccatctatttcatctcatatgaacatgtgattatggatttcaggatggaaaagctcttcctgatggccctgttgtgatatctcctgatgggctatttccatcactttacagagaaggtgagcagtgagtgcccccctacgtctgataactgcttacagtttggttattaattggttgaaagctgaaactatctcctgcccactctccctatttaccaacaatttgataaatgcttacagtttggttattacttggttgaaagctgaaactatctcctgcagactccaatgtattttctttaatattatgctctctgatgttctttgacattcatttgcagttatcagacgagctcctcacgaattcaagatctcatgcctaggggtcagtactcagcaacacaaagataaatatatgaacatacattgaataattgcttgctcttcattgcgctcatgaaataattcgtaccaagtcttgattcacctgtttcacacaggctatcaaagcactatttcctcctgactcaaatccattctatgctggatttggaaatagagatacagatgagcttagttacctcaaggttgggattcctatgggcaaaatttttattataaatcccaaggtaacagatcacttagacagatggtcccttcctacatccaacaaagtttctctatctgcataattggatcaggcccagccagtgaacatattggagatggcatttagaaaatgtgtgtaaattttgtgcagggtgaagttgcggtgaatcgtcgagtagatacaaaatcatacacatccctccatgctcttgtcaatgggatgttccctccgatatcaacgtcatctgagcaggtttgtcatgttctataatgcacatatatcagcactcctgtaaacagagtattgttctgccaatcgaagtatgtttaccatattgtcaatgctccttgacctgatggaaattcttccttacttcaggaggactacaatacttggaattactggaaaatgccgttacctgctgttgatatttgaggtatagccgcagtgcacgctatgctgtacaaggtctctggcacgcagcagcggccatgagaaatggcttccatgttgaacaaaagcaccctgaggtacttttcatctatatctgctgtccagtagttctttcactttcttgcatgagttttatgtcgtcatgtgtgtttgacacaaacttgtttatgcagaccaatcgctggttggtgtcatgtggatgctcctgacataaattcttgcgaggctgacactgtacataggatcataatagaaaaacttacaacctgtatgaccaatgagtcggcagaagcagtgttaattagttccttgttactcaattagtcaatctgttgttgtccaacatgagctgcaagcctgcaactgaatatgtgtaatatactgacttgagtgactgaatggaggggaaatctgtgtaggatgttgccctgcaactcacgtcacttctcataagatttcagttctctttttttttaactatgtagttgtgtttacattgtataatttgtacaagttagcagtttaataatgcatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0615000, RefSeq:Os11g0615000