BGIOSGA022925

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Revision as of 13:25, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022925| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022925, complete gene.| tag = OsI_230...")
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Gene Name

BGIOSGA022925

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022925, complete gene.

LocusTag

OsI_23005

Ensembl Transcript ID

BGIOSGA022925-TA

Ensembl Protein ID

BGIOSGA022925-PA

Length

3100

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17304078..17307177

Sequence Coding Region

17304078..17305413,17305524..17305625,17305699..17305895,17305996..17306206,17306300..17306537
,17306634..17306784,17306869..17307177

Genome Context

<gbrowseImage1> name=IndicaChromosome06:17304078..17307177 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:17304078..17307177 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCTTACCTTGCAGTGTTTGTGTTCCTGCTTCTTGTTTGTTCGTCATGCAGAGCTGATGACAAGCTTACACCTGCAAGGCCGCTCTCCCCCGGCGACGAGCTCATCTCCAGCGGCGGCGTCTTCGCTCTCGGCTTCTTCTCCCCGACGAGCTCAACTTCGGACTTGTACGTCGGCGTGTGGTACAACCAGATCCCCGTGCGCACCTACGTGTGGGTCGCCAACCGCAACACCCCGATCAAGAAGAGCTCCTCCGTGAAGCTGGTCTTGACCAACGATTCCGACCTCGTGCTGTCCGACTCCAATGGCGGCGGTGGCGGCGCCGTCTGGACGACGGTGAACAAAGTCGCCGCCGCCGGTGTTGGTGCTGGAGCAACGGCTGTGCTGCTCGACTCCGGCAACTTCGTTGTGCGGCTGCCGAACGGCTCGGAAGTATGGCGGAGCTTCGATCACCCGACGGACACCATCGTGCCCAACGTGAGTTTCCCGCTGAGCTACATGGCCAACAGCTTAGACCGCATCGTCGCGTGGAGGGGGCCCAACGACCCGTCCGCCGGCGACTTCACCATGGGCGGCGACTTCACCATGGGCGGCGACTCCAGCTCGGACCTCCAGATCGTCGTCTGGAACGGGACGAGGCCGTACTGGCGACGAGCGGCGTGGACCGGCGCGTCCATCTTCGGCGTGATCCAGACCAACACCAGCTTCAAGCTGTACCAGACGATCGACGGCGACATGGCCGACGGCTACTCCTTCAAGCTGACCGTCGCCGACGGCTCGCCGCCCATGCGCATGACGCTGGACTACACTGGCGAGCACACCTTCCAGAGCTGGGACGGCAACACGTCGTCGTGGACCGTCTTCGCCCGGTACCCCATCGGCTGCGACAAGTACGCCTCGTGCGGGCCATTCGGCTACTGCGACGGCATCGGCGCCACGGCGACTCCGACGTGCAAGTGCCTCGACGGCTTCGTCCCAGTTGACGGCGGCCACGACGTCTCGAGAGGTTGCCAGAGGAAGGAGGAGGAGGTGGGATGCGTCGGCGGCGGAGATGGCTTCTTGACCTTGCCGAGCATGAGGACGCCGGACAAGTTCTTGTACGTGAGGAACAGAAGCTTCGATCAGTGCACCGCAGAGTGCAGCCGCAACTGCTACTGCACGGCTTATGCTTATGCAATCCTGAATAATGCCGATGCGACGGAGGACCGGTCCAGGTGCTTGGTTTGGATGGGGGAGCTCGTCGACACGGGCAAGTTCAGCGATGGTGCCGGCGGCGAGAACCTCTACCTCCGGATTCCTGGCTCACGAGGCATGTATTTCGATAACCTTTACGGTAATAACAAGATGAAAAGTACTGTGCTGAAGATTGTACTGCCGGTTGTGGCTGGTCTTCTGCTGATACTTGGAGGCATATGTCTTGTACGCAAATCAAGAGAGGCGTTCCTTTCAGGCAATCAACCAAGCAAGAAAGTTCAGAGCAAATATCCATTTCAACACATGAATGATTCAAACGAAGTTGGGAGCGAAAATGTAGAACTTTCTTCTGTTGACTTGGATTCTGTCCTCACTGCAACAAACAATTTCTCCGATTACAACTTGCTTGGAAAAGGAGGTTTTGGAAAAGTTTACAAGGGAGTTTTGGAGGGTGGCATAGAAGTTGCTGTCAAGAGGCTTAGCAAGGGTTCAGGGCAAGGTGTTGAGGAGTTCAGAAATGAAGTGGTTCTGATTGCTAAATTACAACACAGAAACTTGGTTAGGCTTCTTGGTTGCTGCATTCATGAAGACGAAAAGTTACTCATCTACGAATACTTACCAAACAGAAGCTTGGATGCCTTCCTTTTTGATGCTAACAGAAAAAACACGCTTGACTGGCCGACAAGGTTCAAGATAATTAAAGGAGTAGCAAGAGGTCTTCTTTATCTTCACCAGGATTCAAGATTAACAATAATCCATAGAGATCTAAAGACAAGCAACATTTTGTTGGACACAGAAATGAGTCCTAAAATATCAGATTTCGGCATGGCAAGGATCTTTGGTGGAAATGAGCAACAAGCTAATACCACCAGGGTTGTCGGCACATATGGTTACATGTCTCCTGAATATGCTTTGGATGGCTTTTTTTCCGTCAAGTCTGACACCTATAGTTTTGGTGTCATACTGTTGGAAGTTGTGAGTGGCTTAAAGATCAGTTCAGCCCATCTCAAAGTGGACTGTTCAAACCTTATAGCCTATGCATGGAGCTTATGGAAAGATGGAAATGCAAGGGATTTCGTAGACTCATTCATTGTGGAGAGCGGTCCACTTCATGAAGTTGTACGATGTATACATTTAGGACTCCTTTGCATTCAAGATCAACCAAGTGCTAGGCCACTGATGTCATCCATTGTGTTCATGCTGGAGAACGAAACTGCCGTGCTTCCTGCTCCAAAGGAGCCTATATATTTCACAAGGAGGGAGTACGGGACAGACGAAGACACGAGAGATAGCATGAGATCAAGATCTCTGAACCACATGAGTATAACAGCAGAAGATGGGCGTTAA</cdnaseq>

Protein Sequence

<aaseq>MAAYLAVFVFLLLVCSSCRADDKLTPARPLSPGDELISSGGVFALGFFSPTSSTSDLYVGVWYNQIPVRTYVWVANRNTPIKKSSSVKLVLTNDSDLVLSDSNGGGGGAVWTTVNKVAAAGVGAGATAVLLDSGNFVVRLPNGSEVWRSFDHPTDTIVPNVSFPLSYMANSLDRIVAWRGPNDPSAGDFTMGGDFTMGGDSSSDLQIVVWNGTRPYWRRAAWTGASIFGVIQTNTSFKLYQTIDGDMADGYSFKLTVADGSPPMRMTLDYTGEHTFQSWDGNTSSWTVFARYPIGCDKYASCGPFGYCDGIGATATPTCKCLDGFVPVDGGHDVSRGCQRKEEEVGCVGGGDGFLTLPSMRTPDKFLYVRNRSFDQCTAECSRNCYCTAYAYAILNNADATEDRSRCLVWMGELVDTGKFSDGAGGENLYLRIPGSRGMYFDNLYGNNKMKSTVLKIVLPVVAGLLLILGGICLVRKSREAFLSGNQPSKKVQSKYPFQHMNDSNEVGSENVELSSVDLDSVLTATNNFSDYNLLGKGGFGKVYKGVLEGGIEVAVKRLSKGSGQGVEEFRNEVVLIAKLQHRNLVRLLGCCIHEDEKLLIYEYLPNRSLDAFLFDANRKNTLDWPTRFKIIKGVARGLLYLHQDSRLTIIHRDLKTSNILLDTEMSPKISDFGMARIFGGNEQQANTTRVVGTYGYMSPEYALDGFFSVKSDTYSFGVILLEVVSGLKISSAHLKVDCSNLIAYAWSLWKDGNARDFVDSFIVESGPLHEVVRCIHLGLLCIQDQPSARPLMSSIVFMLENETAVLPAPKEPIYFTRREYGTDEDTRDSMRSRSLNHMSITAEDGR</aaseq>

Gene Sequence

<dnaseqindica>1..1336#1447..1548#1622..1818#1919..2129#2223..2460#2557..2707#2792..3100#ATGGCGGCTTACCTTGCAGTGTTTGTGTTCCTGCTTCTTGTTTGTTCGTCATGCAGAGCTGATGACAAGCTTACACCTGCAAGGCCGCTCTCCCCCGGCGACGAGCTCATCTCCAGCGGCGGCGTCTTCGCTCTCGGCTTCTTCTCCCCGACGAGCTCAACTTCGGACTTGTACGTCGGCGTGTGGTACAACCAGATCCCCGTGCGCACCTACGTGTGGGTCGCCAACCGCAACACCCCGATCAAGAAGAGCTCCTCCGTGAAGCTGGTCTTGACCAACGATTCCGACCTCGTGCTGTCCGACTCCAATGGCGGCGGTGGCGGCGCCGTCTGGACGACGGTGAACAAAGTCGCCGCCGCCGGTGTTGGTGCTGGAGCAACGGCTGTGCTGCTCGACTCCGGCAACTTCGTTGTGCGGCTGCCGAACGGCTCGGAAGTATGGCGGAGCTTCGATCACCCGACGGACACCATCGTGCCCAACGTGAGTTTCCCGCTGAGCTACATGGCCAACAGCTTAGACCGCATCGTCGCGTGGAGGGGGCCCAACGACCCGTCCGCCGGCGACTTCACCATGGGCGGCGACTTCACCATGGGCGGCGACTCCAGCTCGGACCTCCAGATCGTCGTCTGGAACGGGACGAGGCCGTACTGGCGACGAGCGGCGTGGACCGGCGCGTCCATCTTCGGCGTGATCCAGACCAACACCAGCTTCAAGCTGTACCAGACGATCGACGGCGACATGGCCGACGGCTACTCCTTCAAGCTGACCGTCGCCGACGGCTCGCCGCCCATGCGCATGACGCTGGACTACACTGGCGAGCACACCTTCCAGAGCTGGGACGGCAACACGTCGTCGTGGACCGTCTTCGCCCGGTACCCCATCGGCTGCGACAAGTACGCCTCGTGCGGGCCATTCGGCTACTGCGACGGCATCGGCGCCACGGCGACTCCGACGTGCAAGTGCCTCGACGGCTTCGTCCCAGTTGACGGCGGCCACGACGTCTCGAGAGGTTGCCAGAGGAAGGAGGAGGAGGTGGGATGCGTCGGCGGCGGAGATGGCTTCTTGACCTTGCCGAGCATGAGGACGCCGGACAAGTTCTTGTACGTGAGGAACAGAAGCTTCGATCAGTGCACCGCAGAGTGCAGCCGCAACTGCTACTGCACGGCTTATGCTTATGCAATCCTGAATAATGCCGATGCGACGGAGGACCGGTCCAGGTGCTTGGTTTGGATGGGGGAGCTCGTCGACACGGGCAAGTTCAGCGATGGTGCCGGCGGCGAGAACCTCTACCTCCGGATTCCTGGCTCACGAGGCATGTATTTCGATAACCTTTACGGTGTTCTCTACTGGTTGTAGAAATGATTTCTTGGATATTTTCTTTATTCTGGACTGTATAATAATATGATTAATTCGCTTGATATGTAATGTGATTAATGATTTCTGCAGGTAATAACAAGATGAAAAGTACTGTGCTGAAGATTGTACTGCCGGTTGTGGCTGGTCTTCTGCTGATACTTGGAGGCATATGTCTTGTACGCAAATCAAGAGGTAGAGTGTAAAAAACATTACTTTGCTCTTTGATGAGATATTTCACTTGTATGAAACAATAATGATGATACAGAGGCGTTCCTTTCAGGCAATCAACCAAGCAAGAAAGTTCAGAGCAAATATCCATTTCAACACATGAATGATTCAAACGAAGTTGGGAGCGAAAATGTAGAACTTTCTTCTGTTGACTTGGATTCTGTCCTCACTGCAACAAACAATTTCTCCGATTACAACTTGCTTGGAAAAGGAGGTTTTGGAAAAGTTTACAAGGTAATAATGATAAGTCTTAGCTTGATTTTTGAGTTAAAGATATATGATATGTTATAGCTTATCTCTTGTTTAATCAAAGAATGGTGCATTATATATTTAGGGAGTTTTGGAGGGTGGCATAGAAGTTGCTGTCAAGAGGCTTAGCAAGGGTTCAGGGCAAGGTGTTGAGGAGTTCAGAAATGAAGTGGTTCTGATTGCTAAATTACAACACAGAAACTTGGTTAGGCTTCTTGGTTGCTGCATTCATGAAGACGAAAAGTTACTCATCTACGAATACTTACCAAACAGAAGCTTGGATGCCTTCCTTTTTGGTACGTTATTTCTGACTTATGATCTCTGACAATAAACTGAAGGGATATTGATGATGTCCGACAATAAATTTCATTCCACATTGATCTTGGAAGATGCTAACAGAAAAAACACGCTTGACTGGCCGACAAGGTTCAAGATAATTAAAGGAGTAGCAAGAGGTCTTCTTTATCTTCACCAGGATTCAAGATTAACAATAATCCATAGAGATCTAAAGACAAGCAACATTTTGTTGGACACAGAAATGAGTCCTAAAATATCAGATTTCGGCATGGCAAGGATCTTTGGTGGAAATGAGCAACAAGCTAATACCACCAGGGTTGTCGGCACATAGTAAGCAGTTCATACTTCATATATTAGCTAATGTTCAACGTGCAAACTATTTACCCTAATTCAAACTGCATATTGCTTCCTGAATTATTTAAACAGTGGTTACATGTCTCCTGAATATGCTTTGGATGGCTTTTTTTCCGTCAAGTCTGACACCTATAGTTTTGGTGTCATACTGTTGGAAGTTGTGAGTGGCTTAAAGATCAGTTCAGCCCATCTCAAAGTGGACTGTTCAAACCTTATAGCCTATGTAAGTATAGCACAACGCTCAAATTTCTGCAAGTCAAACTAAATGTAATGAGTTGAGATATCATAACTTGATTTGTTTCTTCAGGCATGGAGCTTATGGAAAGATGGAAATGCAAGGGATTTCGTAGACTCATTCATTGTGGAGAGCGGTCCACTTCATGAAGTTGTACGATGTATACATTTAGGACTCCTTTGCATTCAAGATCAACCAAGTGCTAGGCCACTGATGTCATCCATTGTGTTCATGCTGGAGAACGAAACTGCCGTGCTTCCTGCTCCAAAGGAGCCTATATATTTCACAAGGAGGGAGTACGGGACAGACGAAGACACGAGAGATAGCATGAGATCAAGATCTCTGAACCACATGAGTATAACAGCAGAAGATGGGCGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022925

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