BGIOSGA022956

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Revision as of 13:25, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022956| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022956, complete gene.| tag = OsI_230...")
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Gene Name

BGIOSGA022956

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022956, complete gene.

LocusTag

OsI_23064

Ensembl Transcript ID

BGIOSGA022956-TA

Ensembl Protein ID

BGIOSGA022956-PA

Length

4569

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18127792..18132360

Sequence Coding Region

18127792..18128052,18128512..18128869,18129456..18129909,18129979..18130027,18130121..18130192
,18130288..18130417,18130498..18130618,18130711..18130960,18131051..18131155
,18131251..18131295,18131450..18131602,18131689..18131967,18132061..18132197
,18132273..18132360

Genome Context

<gbrowseImage1> name=IndicaChromosome06:18127792..18132360 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:18127792..18132360 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCATTGAGACACACTACCACTGCTACTCTCTACATCAGTCCACAAAGAGGAAGGTGGAGGAAGAAGACCTGCAAGGTGAGAGGAGGCCAATGGTGAAGTTCTCCAAGCAGTTCGAGGGCCAGCTTGTGCCCGAATGGAAGGACGCCTTCGTGGACTACTGGCAGCTCAAGAAGGACATCAAGAGGCTGCAGGCTGCGGAGGCGGAGGCGGCCGGGGTGGCGGCGACGACGCCGCTGTCGCAGTGCCAGGCGCCGGTGCATAGGAAGCTGGCCAGCGGCGGAGGCGGCGGCGGCGGCGCGGTGGCCGGAGAGGTGTACGAAACGGAGCTCGTGGACGGCGGAGCCGGGTTCGCGGACGGCGAGGCGGCGAGGGCCTTCTTCGCGAGGCTGGACGAGCAGCTCAACAAGGTGAACCGCTTCTACGAGCGGAAGGAGGCCGAGTTCGTGGAGCGCGGCGAGTCGCTCCGCCGCCAGCTGCAGATCCTCGCCGAGCTCCGGGCCGCCGTCGTCGCCGAGCAGCAGCGCGACGGGCGCCGCCGCCGATGCGGCAACGGCGGCGACTCCTCGCCGCCGGACACGGAGGATCCCTCCGTCTCCTGCTCCATCCTCCACGGAGATCAGTCCCTCAGAGGCACTTCTGAGCAAGAACAGGAAGGCCAGGAAAAGCTCACCAAAGACATGATTGCAAGGAGCCCTGACGAAGGAGACGATGATCAGCTCACCATCCCTCAAGAATTGGGCGATTCAGGGAGGCTTGGCAGGCCAAGAGAAGAAGCCGCCAACACCAGGCCGAGGACGACGCTCCCAGGAGGCAGGGCGGTCACCTGCCAAGGCAGAAGCGTCAGGATCAACATCCCAGTGACCACGCCGACGAGGACCGTCACCGCCATCCGTGAGCTTCTGTTCGACGACATGCTAAGCCAGTCGAGGAGGAGCGGTAGCGCCAACGGTACAAAATGCGGCGACAAGCTGAGCATCAACAAGAGGAAGGTGCATCAGGCAGAGAAGATGATAAGGGGTGCCCTGATTGAGCTGTACAAGGGATTGGGGTATCTCAAGACATACCGGAGCTTAAACATGATGGCGTTTGTGAAGATTTTGAAGAAATTTGACAAGGTTACAGCAAAGGAAGCTCAGTCAATATACCTTAAAGTAGTGGAGAGCTCCTACTTCAATGTCTCTGACAAGGTAATTAGGCTAATGGACGATGTGGATGAGCTGTTTGTGAGGCATTTTGCAGAAGGTGACAAACGGAAAGCAATGAAGTATCTTAAGCCAAATCAGAGGGAAGAATCACACACCACAACATTTTTCATAGGGCTATTCACTGGTGGCTTTGCAGCATTATTCATTGGTTATTGTATCATGGCACACATTGCTGGGATGTACACCCAGCAGTCAAACAAGGTCTACATGGCAACATCATATCCTGTCCTGAGCATGTTCAGCCTCTTCTTTCTGCATCTCTTCCTCTACGGATGCAACATCTTCATGTGGAGAAAGACACGCATAAACTACACATTCATATTTGAATTCACGCCTACCAAAGAGCTGAAGTATCGTGATGTGTTCCTGATTTGCACTACTTCCATGACAATTGTCATTGGTGTTATGTTTGCACACCTGACACTCATTGTCAAAGGGTATTCGTCATGTGCAGTCCAAGCAATACCAGGAGCTCTACTTCTGGTTTTCTTGCTAATATTGGTCTGCCCTTTCAACATACTCTACCGATCATGTCGTTACCACTTCCTAACAGTGATCAGAAACATCATTCTAACCCCCTTCTACAAGGTTGTCATGGTTGATTTCTTCATGGCTGATCAGCTTTGCAGCCAGGTACCACTGCTTAGGAGCCTAGAGTATCTGGCGTGCTATTACATAACCAGCAGCTACAAGACACAAGACTATGGCTACTGCACCAGAGTGAAGCACTTTAGAGATTTGGCTTATGCAGTATCCTTCCTACCTTACTACTGGAGGGCCATGCAGTGCGCAAGGAGATGGTTTGACGAGGGGGACATAAATCACATTGTCAACCTTGGGAAGTATGTGTCAGCAATGCTTGCTGCTGGAACAAAAGTGGCATACGAGAATGATAACAGTGCTGGATGGCTGTCACTTGTTGTCATTGTGTCGAGTCTCGCCACTATCTACCAACTATACTGGGACTTTGTCAAGGATTGGGGTCTTCTGCAGTTTAACTCCAAGAACCCTTGGCTCCGTAATGATCTGATACTCAAACAAAAGTACATCTATTTCCTTTCCATGGGTCTGAACCTTATCTTGAGGCTGGCATGGCTTCAGACCGTCATCCACCCTAACATCGGAAGCCTGGATTCCAGAGTAACTTTGTTCATCTTGGCAGCTCTTGAGGTGATTCGACGAGGCCACTGGAACTTCTACAGGTTGGAAAACGAGCACCTAAACAATGCAGGGAAATTCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTGGAAGAGGACTAA</cdnaseq>

Protein Sequence

<aaseq>MATIETHYHCYSLHQSTKRKVEEEDLQGERRPMVKFSKQFEGQLVPEWKDAFVDYWQLKKDIKRLQAAEAEAAGVAATTPLSQCQAPVHRKLASGGGGGGGAVAGEVYETELVDGGAGFADGEAARAFFARLDEQLNKVNRFYERKEAEFVERGESLRRQLQILAELRAAVVAEQQRDGRRRRCGNGGDSSPPDTEDPSVSCSILHGDQSLRGTSEQEQEGQEKLTKDMIARSPDEGDDDQLTIPQELGDSGRLGRPREEAANTRPRTTLPGGRAVTCQGRSVRINIPVTTPTRTVTAIRELLFDDMLSQSRRSGSANGTKCGDKLSINKRKVHQAEKMIRGALIELYKGLGYLKTYRSLNMMAFVKILKKFDKVTAKEAQSIYLKVVESSYFNVSDKVIRLMDDVDELFVRHFAEGDKRKAMKYLKPNQREESHTTTFFIGLFTGGFAALFIGYCIMAHIAGMYTQQSNKVYMATSYPVLSMFSLFFLHLFLYGCNIFMWRKTRINYTFIFEFTPTKELKYRDVFLICTTSMTIVIGVMFAHLTLIVKGYSSCAVQAIPGALLLVFLLILVCPFNILYRSCRYHFLTVIRNIILTPFYKVVMVDFFMADQLCSQVPLLRSLEYLACYYITSSYKTQDYGYCTRVKHFRDLAYAVSFLPYYWRAMQCARRWFDEGDINHIVNLGKYVSAMLAAGTKVAYENDNSAGWLSLVVIVSSLATIYQLYWDFVKDWGLLQFNSKNPWLRNDLILKQKYIYFLSMGLNLILRLAWLQTVIHPNIGSLDSRVTLFILAALEVIRRGHWNFYRLENEHLNNAGKFRAVKVVPLPFHEVEED</aaseq>

Gene Sequence

<dnaseqindica>1..261#721..1078#1665..2118#2188..2236#2330..2401#2497..2626#2707..2827#2920..3169#3260..3364#3460..3504#3659..3811#3898..4176#4270..4406#4482..4569#ATGGCCACCATTGAGACACACTACCACTGCTACTCTCTACATCAGTCCACAAAGAGGAAGGTGGAGGAAGAAGACCTGCAAGGTGAGAGGAGGCCAATGGTGAAGTTCTCCAAGCAGTTCGAGGGCCAGCTTGTGCCCGAATGGAAGGACGCCTTCGTGGACTACTGGCAGCTCAAGAAGGACATCAAGAGGCTGCAGGCTGCGGAGGCGGAGGCGGCCGGGGTGGCGGCGACGACGCCGCTGTCGCAGTGCCAGGCGCCGGTGGCGGCGGCTCACTGGGTCATGAGGCTGCCGTTCTTGCACCCCCATGGACACCACCACAAGGAGCATGGTGCCATCCAGGCATGCAACCACTGCATTTTTATATTAATTTGTGCAAATTACTCCCTCTAGTGAAAAAATAGTTAACATTTCGTCCAAGATTTTTGATCAAACTGCTATAGAAACTTGACTCTTGTTTTACATTATAATAAGTTTATGAAATCTAATAAGCTATGATATTAATATAGCACCTTTTTAGACAAATCTACATATACCCCTTTTTTTTTCATTTTCAAACTAATCATAAGAATTTGAGAGATTATTGTTGATTAAAGTTTTGAAAGTTTAATCCTATCCTAAACATCAAGGGAAATTTTCAGCAATTTTCATGGTTACGGGTGTTCGTAAAAGTAATAACTGTATCTGTTCTGCTGTTGGCACGTGTGCAATGCAATGCAGGTGCATAGGAAGCTGGCCAGCGGCGGAGGCGGCGGCGGCGGCGCGGTGGCCGGAGAGGTGTACGAAACGGAGCTCGTGGACGGCGGAGCCGGGTTCGCGGACGGCGAGGCGGCGAGGGCCTTCTTCGCGAGGCTGGACGAGCAGCTCAACAAGGTGAACCGCTTCTACGAGCGGAAGGAGGCCGAGTTCGTGGAGCGCGGCGAGTCGCTCCGCCGCCAGCTGCAGATCCTCGCCGAGCTCCGGGCCGCCGTCGTCGCCGAGCAGCAGCGCGACGGGCGCCGCCGCCGATGCGGCAACGGCGGCGACTCCTCGCCGCCGGACACGGAGGATCCCTCCGTCTCCTGCTCCATCCTCCACGGTACGTGCGTACATACTCTCCAGTCTCCATCTCTCTTCTGCTAACATCTGCACGTACTGTGTCATCAAATACGTCACATTAGAATAGTCAAAGTGCACATTAATTAGTTTTTGATGTGTAAATGAACATGATTGAAATGATGGTAATTTTTTGGGACAGATAAGATATAAGTTTGGTGGTGTAGCATTTCGATTAGTACATTGATATTGTTGTTGCCATTCATGCCAGCTGAGAATAGATTTTGATTAGGCAGGCTGACATATACGTATACCCAACACACCCATAGTCTCATATAGATGTATCCTACATATATACACCTATAGCAGAAAGAATCCTGCAAGTGACCATCTTCTTTTTCTCTGAATACAAATAGTTGCATACGCACCAATCAGAAATAATCCATGAATGAACCTATAAAAAAGACGTGCTGAAACGCGCATACAGTTGCTAAAGAAACACGCTTTTGTATTGTTTGGGTCGGATGTGTTCTCTAATCTAAACCATCCCTCTGAATTTAGTAACAACATACAAATTGAAGTAGACTGAACTTATCATTATTCATGACACATCCTCTAAAAACTCACAGGAGATCAGTCCCTCAGAGGCACTTCTGAGCAAGAACAGGAAGGCCAGGAAAAGCTCACCAAAGACATGATTGCAAGGAGCCCTGACGAAGGAGACGATGATCAGCTCACCATCCCTCAAGAATTGGGCGATTCAGGGAGGCTTGGCAGGCCAAGAGAAGAAGCCGCCAACACCAGGCCGAGGACGACGCTCCCAGGAGGCAGGGCGGTCACCTGCCAAGGCAGAAGCGTCAGGATCAACATCCCAGTGACCACGCCGACGAGGACCGTCACCGCCATCCGTGAGCTTCTGTTCGACGACATGCTAAGCCAGTCGAGGAGGAGCGGTAGCGCCAACGGTACAAAATGCGGCGACAAGCTGAGCATCAACAAGAGGAAGGTGCATCAGGCAGAGAAGATGATAAGGGGTGCCCTGATTGAGCTGTACAAGGGATTGGGGTATCTCAAGACATACCGGTAAGTGTAACTGACATGTAATGCTTGGCTTGGTTTTATGCGCGTACTGACAAGACAATCTTGCTGCAGGAGCTTAAACATGATGGCGTTTGTGAAGATTTTGAAGAAATTTGACAAGGTTCCTGCCAATTCCTCTTCCTTCTGATTCCATGACCTGAAATTTATCACGTATTAGAATTTCTGAAAGAACATGAATATCTTCTCATTTCAGGTTACAGCAAAGGAAGCTCAGTCAATATACCTTAAAGTAGTGGAGAGCTCCTACTTCAATGTCTCTGACAAGGTATTTTCCAATCATGCAGAACCTAAAGAAACTCTGAATCAGTTAATTCTATTAACACAGCAAAGATCATGATTTAAAATTCTTTATTTGAACAGGTAATTAGGCTAATGGACGATGTGGATGAGCTGTTTGTGAGGCATTTTGCAGAAGGTGACAAACGGAAAGCAATGAAGTATCTTAAGCCAAATCAGAGGGAAGAATCACACACCACAACATTTTTCATAGGTAATAATTCTTAATAATCTTTGCATTAACTCATCAGCCCAAATTTAAGATTATTTATGCACACGCTTGTCAATTTCCAGGGCTATTCACTGGTGGCTTTGCAGCATTATTCATTGGTTATTGTATCATGGCACACATTGCTGGGATGTACACCCAGCAGTCAAACAAGGTCTACATGGCAACATCATATCCTGTCCTGAGGTCAGCTAAAAAATGCAACTCAACTGCTACAGCACACCTGAAAAAAAAACGAAAAATTGCTCTAATTCTGATTAAATGATCTCAAACTGCAGCATGTTCAGCCTCTTCTTTCTGCATCTCTTCCTCTACGGATGCAACATCTTCATGTGGAGAAAGACACGCATAAACTACACATTCATATTTGAATTCACGCCTACCAAAGAGCTGAAGTATCGTGATGTGTTCCTGATTTGCACTACTTCCATGACAATTGTCATTGGTGTTATGTTTGCACACCTGACACTCATTGTCAAAGGGTATTCGTCATGTGCAGTCCAAGCAATACCAGGAGCTCTACTTCTGGTATGCAGTGTTGAACATTCCAAGTGTAAAATTATATGCTTACATTTGAAAGATATTAAACATTTATGAGGTTGGTGCCCATCTATTCAGGTTTTCTTGCTAATATTGGTCTGCCCTTTCAACATACTCTACCGATCATGTCGTTACCACTTCCTAACAGTGATCAGAAACATCATTCTAACCCCCTTCTACAAGGTATTTTTATTATAGTTGAAGAGAAGTAGCTTATCGATGATGTTCTATCAAATTCCACATCCAAAACAAATTGCTAAATATTTGTACGTCTGTAGGTTGTCATGGTTGATTTCTTCATGGCTGATCAGCTTTGCAGCCAGGTAATTACTTAACAGAAGCCACACCTAGGCCTTTACTTGCTCAGCAGAGCACATTTTCAGCATGACGAAAGTGGTTTTGTCACCGTAAGTGTCTGTTTGAGTGATGATTCTGTACAGAAAAAAGACTAATAAAACAATGACTCCTGGAAACTAGGTACCACTGCTTAGGAGCCTAGAGTATCTGGCGTGCTATTACATAACCAGCAGCTACAAGACACAAGACTATGGCTACTGCACCAGAGTGAAGCACTTTAGAGATTTGGCTTATGCAGTATCCTTCCTACCTTACTACTGGAGGGCCATGCAGGTATATAATTCAAATCATACACTGCAACGTCCCTTCTTCAGACAGTATGAAGATTTCATATCTTTTGTTTTGTAATGGTTGGGCAGTGCGCAAGGAGATGGTTTGACGAGGGGGACATAAATCACATTGTCAACCTTGGGAAGTATGTGTCAGCAATGCTTGCTGCTGGAACAAAAGTGGCATACGAGAATGATAACAGTGCTGGATGGCTGTCACTTGTTGTCATTGTGTCGAGTCTCGCCACTATCTACCAACTATACTGGGACTTTGTCAAGGATTGGGGTCTTCTGCAGTTTAACTCCAAGAACCCTTGGCTCCGTAATGATCTGATACTCAAACAAAAGTACATCTATTTCCTTTCCATGGTATGTTCTCTTAAAAAACTAAGGTCCTGCATCAGTACTTTTAGAACAAAGATAGATTTCAGGATACTTACATTAGAATCCTTTTTTTTTCAGGGTCTGAACCTTATCTTGAGGCTGGCATGGCTTCAGACCGTCATCCACCCTAACATCGGAAGCCTGGATTCCAGAGTAACTTTGTTCATCTTGGCAGCTCTTGAGGTGATTCGACGAGGCCACTGGAACTTCTACAGGTAAAAAACCATAGCTAATTAAGCTACAAAAGTGAACTTAAACCTAGATTGATACTAAGAAAACTTACATGTCAGGTTGGAAAACGAGCACCTAAACAATGCAGGGAAATTCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTGGAAGAGGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022956

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022956&oldid=45481"