BGIOSGA022966

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Revision as of 13:25, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022966| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022966, complete gene.| tag = B1089G0...")
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Gene Name

BGIOSGA022966

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022966, complete gene.

LocusTag

B1089G05.24

Ensembl Transcript ID

BGIOSGA022966-TA

Ensembl Protein ID

BGIOSGA022966-PA

Length

6802

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18339424..18346225

Sequence Coding Region

18339424..18339547,18341853..18341953,18342373..18342441,18342552..18343799,18343938..18344015
,18345619..18345801,18345878..18345988,18346073..18346225

Genome Context

<gbrowseImage1> name=IndicaChromosome06:18339424..18346225 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:18339424..18346225 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGCCGGAGTCGTACATCGGGAGCGTGATAAGCCTCACGTCGAAGAGCGAGATCCGGTACGAGGGCGTCCTCTACACCATCAACACCGAGGAGTCCAGCATCGGGCTCAGGAACGTTCGCTCATTTGGAACTGAAGGTCGTAAGAAGGATGTTCAACAGATTCCAGCCAGTGACAAGATATATGAATACATACTATTTAGAGGAAGTGATATAAAGGATTTACAAGTCAAATCCTCTCCACCAGCTCAGCCTACTACTTTACACAACGATCCAGCGATTATCCAGTCACATTATCCTTGTGCTGCCTCTACGAGCTTACCGCCTCCTGCAAGCACAGCAGCTGATCCTGCCTCACACAATGGTCAGTCAGGAATTCAGATGCCTCCACCATTGCCCCAATTTCAACCTGGGGCCAGTTTACCATCATGGAACTCATCACCTATGCCATCATCTGCAAATGGCGCTCCTGCTAGCACAACAACAGCTGATCCTGGCTCACACAATGGTCAGTCAGGAATTCAGATGCCACCACCGTTGCCCCAATATCAACCTGGGGCCAGTTTACCGTCATGGAACTCATCACCTATGCCATCATCTGCAAATGGTGCTGGCCTTACTATGCCACCAATGTACTGGCCAGGATTTTATACACCACCAAGTGGGTTTCCTCATTTGCAACAACCGCCCTTTCTTCGTCCACCACATGGCTTGACAATTCCACAGGCCTTGCAGCAGCCCATACAGTATCCTGGACTTAATGCACCTTTACCACCTTTTCCTAGAATGCCAGAGTTTGCTTTACCACAACCTGGTAGTGGTAATAACTTGACCCAGAATCTAGGTGTATCCACATCAATGCCGGTCCCTGCCTTATCAAGTACTCCAGCAACTGAATCATCTGCAAACCAGCTTCCAAATATGCTGTCATCTGTTTCTGCTAGTGTATTCTCTCTGGGTTTAACTCCCCCATCTGTTAATCTGCCAGTCTCTACAATTGAATCGACTATGTCCCAATCGCAAGGCATCTCTCCTCTGATGAACAATAAGCCAGTCTCACTTCCTCTTGACTCTACTGTACCATCTGCCAGCAGTAATAAGCCTATGAATATACCTGTGCCAACCTATCTACCTTCCTCTCAGCCACCATTGGCTAATATTGCAGCAAGTGCAGCCACTGTTGCAGAACCAGTTACATTGGTCACTCCTGGCCAACTTCTACCAACCATTTCATCTACAGTCCTTTCGGCTGATGCCTTGGAAACAGCTTCAGCTATGATTCCATCCCCTAAGGCTGCCTCCTCTATGGTCTCATCCTCTCAGGCTGCCTTGGCTGCATCCTCTCAGGTTACTTCCTCTGTAGTTTCACCCTCAGAGGATCAATTTGCTTCCTCACCTGTTCCATCACATCAACAGCTGGAGCAAAACAATGAAGATAGGCACACCAAGAAACCTGAATGGAAGGCTAAACAACACTCTGTTGCTCCATCCAACAAGGAACCCCTGTTGCCAGCACCTAAGCCTACTCTTCAGAAGCCTGTTGGAGCTTCCTCATACATTCAATACAACAATAGAGGCCGAGGAAGAGGAAGAGGCCGAGGAAGAGGAATTGGGCAATCACGTCCTATAACCAAGTTTACAGAGGACTTCGATTTCATGGCAATGAATGAGAAGTTTAACAAAGATGAAGTATGGGGCCATCTCGGTAAAAGCAAAGGACAGTTGAACGATGATCCTAATGAGTATGAAGATGATGTTCTAGAAGATGATATTTCTCCTGGGAAGCCAGAAGTTAAGCCTGTATATGTCAAAGATGACTTCTTTGATTCACTGTCATGCAATACCATTGATAATGGAGGGGGGAATGGAAGAATCAAATTCTCGGAGCAGAGAAAAATAGACACAGAGACTTTTGGTGATTCTGCAAGGCATCGGCCCATGGGCATGCGTGGAGGAGGGAGGGGTCCCCGTGGTGGACCCCGTGGACGTGGTTACTATGGGAGGGGGTATGGATATATGGGAAGGGGGCGCGGCTACTCCTACCCAAACCACCAATCTTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAPESYIGSVISLTSKSEIRYEGVLYTINTEESSIGLRNVRSFGTEGRKKDVQQIPASDKIYEYILFRGSDIKDLQVKSSPPAQPTTLHNDPAIIQSHYPCAASTSLPPPASTAADPASHNGQSGIQMPPPLPQFQPGASLPSWNSSPMPSSANGAPASTTTADPGSHNGQSGIQMPPPLPQYQPGASLPSWNSSPMPSSANGAGLTMPPMYWPGFYTPPSGFPHLQQPPFLRPPHGLTIPQALQQPIQYPGLNAPLPPFPRMPEFALPQPGSGNNLTQNLGVSTSMPVPALSSTPATESSANQLPNMLSSVSASVFSLGLTPPSVNLPVSTIESTMSQSQGISPLMNNKPVSLPLDSTVPSASSNKPMNIPVPTYLPSSQPPLANIAASAATVAEPVTLVTPGQLLPTISSTVLSADALETASAMIPSPKAASSMVSSSQAALAASSQVTSSVVSPSEDQFASSPVPSHQQLEQNNEDRHTKKPEWKAKQHSVAPSNKEPLLPAPKPTLQKPVGASSYIQYNNRGRGRGRGRGRGIGQSRPITKFTEDFDFMAMNEKFNKDEVWGHLGKSKGQLNDDPNEYEDDVLEDDISPGKPEVKPVYVKDDFFDSLSCNTIDNGGGNGRIKFSEQRKIDTETFGDSARHRPMGMRGGGRGPRGGPRGRGYYGRGYGYMGRGRGYSYPNHQS</aaseq>

Gene Sequence

<dnaseqindica>1..124#2430..2530#2950..3018#3129..4376#4515..4592#6196..6378#6455..6565#6650..6802#ATGGCGGCGGCGCCGGAGTCGTACATCGGGAGCGTGATAAGCCTCACGTCGAAGAGCGAGATCCGGTACGAGGGCGTCCTCTACACCATCAACACCGAGGAGTCCAGCATCGGGCTCAGGAACGGTTAGGCTCCTCCCTCCCGAGTTCTTCCCCCTCCTCCTCCCGCCTCCCCTGGTTGGGCCGCGTCGGCGATCTGTGGGAGAGGGTGTGTGTGTGTGCCGCGTCGCCGTGGAATTATGGATTCGCTGTTTTTCTTTCCTGTTTGCTTAGCTTCCTGTTGCTATGGGTGCATATAATCTCGAATCATCTATGCAGGATTACCGTATGGTTGGGGGTCTAGCTCATTTTTTTTTTGCAAGGATTGTATGCTCTTAGTTCTCGATTACACTGTGGACTAGTCATCTTTGTTGTGCGATGCGAGCTAGAATTTAGAATCTAACAGCGTGGGTAAAGATCTGGGACCGGATGCTGAACAGTTCCACTTGTACTTAGTTAATTTTGTGTTCTTCTGTGGAGTAAACAGCGTGGGCTGTGGTCTACAGCGACTAGGTATGGTTGGTGGGGGATTACTCTTCTTAACGGCCTAACAACCTAGTTTTGTTATTAATGATGGGAAGTCCTTTTGTGATAACCCATTCATAGCAATCCGAATTCAAGTAGTGTAGCATTCAGTGCCTTCTTGCCAAATCGTTGGCGGTCTTAAGTTGGGTAATGTCGTTGTACATCTGAAAGAGGCTAGGGATCTTTCCCTGTTTGGAATATATAGTTGAACCCGAGAATGATGCATGTGGGAAGGTGCCATTGCGGTAGGTGCTTTGCCAAACTTTCTATTGTGAGCTATTGGTAGGAAATGTTTCCCTCTGACAGTTGTCTCTTTCAAGCTATTCTTATTATTACTATTGATGTGTTGGTGATGCTGTGTCTTGACCTGTATCATATAACTCAATGACCCAATCCTGCAGACAACCTTTCCATGCAAAACTCACTGACTGATGTGGGCATTTGTTATTTTTGTAAGGGTTTGCATGTTCCATTACACAGCCAATCATATATTTTCTGTTTCTTAACTGACTTGGAGATGTTACTTCGTCAAACAATCAACGGTTTCTGTTTTTAGATAAGATCCTGTTTTCAACATTGGGTATTGGTGTGTGAGCTAATATTATCTGATAACTTTTCAATGCGTGGAATGCAATCGGATATGGTTTTTACAGGAAGTTTTACACCTTGATAATATTTTCTTTTCTTATTCCGTTAATATTTCAATCCAAGCTTAACTTTCATACCACATTCAAATCTGAAAAAAGCAATACTTCAATATATGGCTAATCTGAACAGTGCAGTTTGCCAATAAGAATTGGCAATTTCATGTAATTTACCTGAGGTTTTTGCTTGCAGATTTGATTTTCTATTTTTTCTTTCCACAAATTTAGAATTTAACATATATTGTAATTTGGTCCCTATGTGTATGTAGTACAGCACCAAATTCTTGTTAGAATAATAGTGATTTTTGGATTTGATCTGAATTTTTGGTTCAAAATAGTCTACTCCCCCCTTCTGCTTCTCCTTGTTTCCATGTCTTTCTGCATACTTGTATCATTCTAGCTCTCTATGCAACACTGTGTATTCTACTATTCCGATAGCTACTAACATCCTTCTGTACGATGAGGACATGGCCATTGTTTCATTTGTTATGTGGAGAGGCTAGTCAAAAGGGCCTTGATGTCTGTTTGACATCATTTTTGCTTTGTTTTGGATTTTCCATAGAAAGATCATTTGTGCAAGTAGGATATCATAGCAGACATAATTTATGAGCAGTGTTGCAGATGCTCCATATATTTCTCTAGGAAAGTGAAATGAAGCTTTATCCGTGGCTTATATTCCCAAAGTTCTAAATGTTTTAGTTAAAACACTAGAAAATAGACGTGGCTTTGCCGCATAATAGACCAGCCAGTATGAAATACTCCATCCGTTTCATCGCGGGTGGCGGAGGATCCGGTGGGCGGCGAGGCGTGCATCGGCCATCGGGAGGAGGGATGGGTGGATTAGGGGTCGAGCGCTTTTGCCAAAAAAAAATTCAAGCTTCGTTGGTCCATCGCAGCGAACTTTCGGGGAGCAAGGAGACACGTGGCAGATTTTTGGGGAGGGGAAGCTTAATTTCTAGGACGCCACGTGGCGTAATCTCCGGCCAGGGATAGAGCCCTGAAATCGGTATTAGAGATTTGAAACTTAACTTGAAGTAAGTTAAAAAATTGTTACCACAAAAATGTATTTTTTTCTCTCTAATCTTATGATTTGATCTCTAATCTTATGATTTGAGTATCCATGGGTGTTTGATATTTTCCTGTGACCTTAAGAAGAGATGCTGTTCTCATGTTCGTGTGCATGATATTATTCTCACTGAGTGCTTCACTGTACTGTTTTGCAGTTCGCTCATTTGGAACTGAAGGTCGTAAGAAGGATGTTCAACAGATTCCAGCCAGTGACAAGATATATGAATACATACTATTTAGAGGAAGTGATATAAAGGTAATGCTGGTAAATCAGAAACATTACTAAAACACTAAATAAATCTGTGATTATTGTTGAATTATTGATCCAATGATTTGGCCTGTTATACAGTATAGTAGGATCAACTTTTGGATTGTAATATCGTACTTTTGGATCATTATTTTCTATTGCTTAATTTTGGTCACATACAAGATGTGGATTAGGATTATCCCATTGAATAATAGTATTTGGAAAATATGTGACTCATTGGGGTCCAGTGATCACATTTTTTTTTTGTCAAGTTCTCCGAAACCTTTATTTAATCCTGATACAAACTTTTTCTTTCTTGCTGATTTACTGTCACTGTTTACATTTTTGTCTTGCTCTGTTTGTTCATCTTGTTGTATTACACTGGCAATCCCCTTTCCTATGTCTTAGCTTTGATTGCTCCACTGCAGGATTTACAAGTCAAATCCTCTCCACCAGCTCAGCCTACTACTTTACACAACGATCCAGCGATTATCCAGGTAAATATACATAAAATGTTAGGCATCTTTTGGAAGGATGCTGGATCTATTTCTTTTGAAGAATGGTTTGATATTTTAGATGATGAGTCTTTGCTCACTATTTTGTGTAGTCACATTATCCTTGTGCTGCCTCTACGAGCTTACCGCCTCCTGCAAGCACAGCAGCTGATCCTGCCTCACACAATGGTCAGTCAGGAATTCAGATGCCTCCACCATTGCCCCAATTTCAACCTGGGGCCAGTTTACCATCATGGAACTCATCACCTATGCCATCATCTGCAAATGGCGCTCCTGCTAGCACAACAACAGCTGATCCTGGCTCACACAATGGTCAGTCAGGAATTCAGATGCCACCACCGTTGCCCCAATATCAACCTGGGGCCAGTTTACCGTCATGGAACTCATCACCTATGCCATCATCTGCAAATGGTGCTGGCCTTACTATGCCACCAATGTACTGGCCAGGATTTTATACACCACCAAGTGGGTTTCCTCATTTGCAACAACCGCCCTTTCTTCGTCCACCACATGGCTTGACAATTCCACAGGCCTTGCAGCAGCCCATACAGTATCCTGGACTTAATGCACCTTTACCACCTTTTCCTAGAATGCCAGAGTTTGCTTTACCACAACCTGGTAGTGGTAATAACTTGACCCAGAATCTAGGTGTATCCACATCAATGCCGGTCCCTGCCTTATCAAGTACTCCAGCAACTGAATCATCTGCAAACCAGCTTCCAAATATGCTGTCATCTGTTTCTGCTAGTGTATTCTCTCTGGGTTTAACTCCCCCATCTGTTAATCTGCCAGTCTCTACAATTGAATCGACTATGTCCCAATCGCAAGGCATCTCTCCTCTGATGAACAATAAGCCAGTCTCACTTCCTCTTGACTCTACTGTACCATCTGCCAGCAGTAATAAGCCTATGAATATACCTGTGCCAACCTATCTACCTTCCTCTCAGCCACCATTGGCTAATATTGCAGCAAGTGCAGCCACTGTTGCAGAACCAGTTACATTGGTCACTCCTGGCCAACTTCTACCAACCATTTCATCTACAGTCCTTTCGGCTGATGCCTTGGAAACAGCTTCAGCTATGATTCCATCCCCTAAGGCTGCCTCCTCTATGGTCTCATCCTCTCAGGCTGCCTTGGCTGCATCCTCTCAGGTTACTTCCTCTGTAGTTTCACCCTCAGAGGATCAATTTGCTTCCTCACCTGTTCCATCACATCAACAGCTGGAGCAAAACAATGAAGATAGGCACACCAAGAAACCTGAATGGAAGGCTAAACAACACTCTGTTGCTCCATCCAACAAGGAACCCCTGTTGCCAGCACCTAAGCCTACTCTTCAGAAGGTAATAGCATACTAAATTTAATTTTTATTACACAAGTACAAGGGAAGATTATTTTTGGTACCATTATTTCCATACTCAGTTAATGTGCGCGATTTGTATACTCTGTAATTAGTCCCATTTTCAATCCTTTGGTTTCAGCCTGTTGGAGCTTCCTCATACATTCAATACAACAATAGAGGCCGAGGAAGAGGAAGAGGCCGAGGAAGAGGAATTGGGGTATGGTATCTAAAACATGTTTTATACGCCTTCAACTGTTCAAATGTAGAAATCCTTAATGGCTAAAACATTCTTGGATTATTTTCCCTGTTTGGTACTGTTACCATGTTTGGCTACTGCTCCCATGTTAGCATTCTTCTGGATTTGATTGTACTCCCTCTGTTTGAAAATATAAGGTGTCCTTGTTTTCCACAAAGTCAGCATTTAAAATTTTTGACTATCTGAAAATATTTTCATGCGATATTAATTTTGTAGTTATTGATAATATATTATGAAAGAAATTAATGTCAAAGTATAATGTTGGAGACTATTTAGAAACCTAATACGCCTTATATTTTCAAATGGAGGGAGTAATGTTTAGTACTGGTTCTATTCACCTCTCTTCTCTGGGTATCATTCTGTATGGTATTGTGGATGCCCTTTTCTGATGTTCGTCATGTAGGACAGTATTCTCAACACTATTATTTTCAAATTCCAAGATGCTAGGTGTGCAATACTGATGTAGGACAATCATCTATTGATGTCCAGTCATCAGATCACAGTTGGGCTCATTGATGGAGTATACAAGAGAGAATGTGGTTTTTGGTATTGGATGAGGAAATCTCTTGTGGCTATTGTCAAAATCAGTTGGAAGTTATTAGGATACTCCATTGTTTTGTAGGTTGTTGATCATGTGGCTACATTTGATCCTAATAGGTTGTTGATTTTGTTTACAAAATGCTTGTAGAAGATAGTGTTACTAAATTCCCAAATGGCCAAAATAGCTGGTATTAATACTATTACTCTAGTCCTCATTTATTCCTAGCCACTGTAGCACTTTTCCTGGATGTGTTAGTACACAATTTATCTTTCAATTTGCTGCTTGCCTCCACACTCATTGCTGTTATCATGCTCCCTCTCAGCCACATTGAAAATTGCCGTTTAGCTTTGTGCCATCCACCATGGAATGGGAAAATGGTTTGGCTGTCAAATAATTTGGACTACCAGTAGTGAAAGGTAAATCATATGTAATTGGGTGAAGCAGATTGCAAGTAGAAAGGCATTAGTACCTCCTTTGTCTGTCTTTTGACCTAAGAATATCTTTATTCCAAATGGAGGGATATCCAGCCTAGTCTATCAGTATTTGGATAAAGAATACATATGTTTGGCTCCTTTGTTTGCTCTGATTTCTGAAGTTGGGAAGGATTTCAATGCTTTTGAGGGAGGGCTAATTTGACTCTCCTCTCCTAGCTAGATTTGCTTGCCCAGGCTAGAAAAAGAACAAAACATGCCCTTCGTAACTGGGTCATCAAACTATTCGATGAGACCACGTTCCACATTTGACACTTGTTCTTGAAGTAACTGTTCCCTGTTTTGACACACAGTTTTAGTTGCCTCCTGTAACCCCATTCCTCGACCTAAATGCTCCATGTTCCTGTTAACTATGAGCAATTTCAATATATATATTTGTCCAAATCATGCTAACTAGACTGTCAAAGGCACATCCCGCTGCTAGCATATGAGTTTTGATGTATTATAGGATGCTCAAATCTGTTCTGCATGAATCATATGCTATGTTATTGAAATTGTAAAATTTGTATACTTATTAGTTTCCCCTCTCCAGCAATCACGTCCTATAACCAAGTTTACAGAGGACTTCGATTTCATGGCAATGAATGAGAAGTTTAACAAAGATGAAGTATGGGGCCATCTCGGTAAAAGCAAAGGACAGTTGAACGATGATCCTAATGAGTATGAAGATGATGTTCTAGAAGATGATATTTCTCCTGGGAAGCCAGAAGTTAAGGTAGTAGCGCTGTTGCATTCTTGCAATTTGTCAATATGTTCGCTGACTAGCATTTTTCTATCTCATCTTTGTGCAGCCTGTATATGTCAAAGATGACTTCTTTGATTCACTGTCATGCAATACCATTGATAATGGAGGGGGGAATGGAAGAATCAAATTCTCGGAGCAGAGAAAAATAGACACAGAGGTAATCAAAAGTTACACATTGTGTCTTTCTCGTTTTCACCTTATGACAACATGAAGTGCTTATTATAGCAAGTTTTGGTTGTAGACTTTTGGTGATTCTGCAAGGCATCGGCCCATGGGCATGCGTGGAGGAGGGAGGGGTCCCCGTGGTGGACCCCGTGGACGTGGTTACTATGGGAGGGGGTATGGATATATGGGAAGGGGGCGCGGCTACTCCTACCCAAACCACCAATCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022966